NO04G03290, NO04G03290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03290 vs. NCBI_GenBank
Match: EWM28752.1 (Protein of unknown function DUF1077, TMEM85 [Nannochloropsis gaditana]) HSP 1 Score: 199.5 bits (506), Expect = 8.400e-48 Identity = 118/170 (69.41%), Postives = 135/170 (79.41%), Query Frame = 0 Query: 6 GFASKLVSIEVEKPLGYYRE--SGAAQQRQVQEARAGKASIEEVNKERALKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLPASIATRAEVSGVPL 174 G +S ++ VEKPL Y E G A RQV EAR GK + EE+ ER LKQ++AM IAQ+PAK LAMQGFMMYMTGSSVSIISIMVVGMSLLNS ++L A NQ FE++ADG SL+LPKL+Y+ALN VFLGMGLYKCSSLGLLPSTA DF+SRLP S A RAEVS VP+ Sbjct: 11 GASSSSLTQAVEKPLASYHEVHEGLA-SRQVHEARTGKVTNEEMTLERQLKQKVAMDIAQTPAKALAMQGFMMYMTGSSVSIISIMVVGMSLLNSAQALAAVNQRFERVADGHISLILPKLIYVALNCVFLGMGLYKCSSLGLLPSTAVDFISRLP-STAYRAEVSSVPV 178
BLAST of NO04G03290 vs. NCBI_GenBank
Match: XP_009831024.1 (hypothetical protein H257_07261 [Aphanomyces astaci] >ETV79183.1 hypothetical protein H257_07261 [Aphanomyces astaci]) HSP 1 Score: 99.0 bits (245), Expect = 1.600e-17 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 0 Query: 53 LKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLPASIATRAEVSGVPL 174 LKQ+ A IAQ+P K L G MMYM+GSS++I SIM+ M++ N K+L N F L DG+ +L K+ ++ NLV +G+ LYKC ++GLLP+T+AD+ LP A S P+ Sbjct: 43 LKQKRASEIAQAPFKGLFQTGLMMYMSGSSINIFSIMITAMAIFNPLKALFNVNGAFASLEDGKMNLAQSKVTFVVANLVAIGVALYKCGTMGLLPTTSADWTWLLPVKQALETSASATPV 163
BLAST of NO04G03290 vs. NCBI_GenBank
Match: XP_002967019.1 (ER membrane protein complex subunit 4 [Selaginella moellendorffii] >EFJ31618.1 hypothetical protein SELMODRAFT_168891 [Selaginella moellendorffii]) HSP 1 Score: 97.1 bits (240), Expect = 5.900e-17 Identity = 65/153 (42.48%), Postives = 95/153 (62.09%), Query Frame = 0 Query: 7 FASKLVSIEVEKPLGYYRESGAAQQRQVQEARAGKASIEEVNKERALKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLP 160 F S EV P GY R GA+ ++++A A + ++ E + KQ+ A IAQ+P + L M GFMM+M G++V + SI + +L +L + FE D +T +L+PKLL+IA+NLV LGMGL+K +SLGLLP+ A+D+VS LP Sbjct: 14 FGDGASSREVADPPGYSR--GASS--EIEDASAAR---QKEKVEASWKQQKAWEIAQAPFRNLFMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGIGKVFEPYKDARTDVLMPKLLFIAMNLVALGMGLWKLNSLGLLPTHASDWVSSLP 159
BLAST of NO04G03290 vs. NCBI_GenBank
Match: XP_002960990.1 (ER membrane protein complex subunit 4 [Selaginella moellendorffii] >EFJ38529.1 hypothetical protein SELMODRAFT_402529 [Selaginella moellendorffii]) HSP 1 Score: 97.1 bits (240), Expect = 5.900e-17 Identity = 65/153 (42.48%), Postives = 95/153 (62.09%), Query Frame = 0 Query: 7 FASKLVSIEVEKPLGYYRESGAAQQRQVQEARAGKASIEEVNKERALKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLP 160 F S EV P GY R GA+ ++++A A + ++ E + KQ+ A IAQ+P + L M GFMM+M G++V + SI + +L +L + FE D +T +L+PKLL+IA+NLV LGMGL+K +SLGLLP+ A+D+VS LP Sbjct: 14 FGDGTSSREVADPPGYSR--GASS--EIEDASAAR---QKEKVEASWKQQKAWEIAQAPFRNLFMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGIGKVFEPYKDARTDVLMPKLLFIAMNLVALGMGLWKLNSLGLLPTHASDWVSSLP 159
BLAST of NO04G03290 vs. NCBI_GenBank
Match: XP_009769930.1 (PREDICTED: ER membrane protein complex subunit 4 [Nicotiana sylvestris] >XP_016465045.1 PREDICTED: ER membrane protein complex subunit 4-like [Nicotiana tabacum]) HSP 1 Score: 97.1 bits (240), Expect = 5.900e-17 Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = 0 Query: 13 SIEVEKPLGYYRESGAAQQRQVQEARAGKASIEEVNKERALKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLPASIATRAEVSG 171 S ++ PLG+ R S Q+ S E+ N E K + A +AQ+PAK L M GFMM+M GS+V + SI + +L +L + FE D + LL PKLL+IALNLV LG+G++K ++LGLLP+ A+D+VS LP A E SG Sbjct: 27 SRDIPDPLGFTRSS--------QDQDDSTLSREKKNAEANWKSQKAWEVAQAPAKNLMMMGFMMWMAGSTVHLFSIGITVSALWQPLSALQGVGKVFEPYKDSKVDLLAPKLLFIALNLVGLGLGVWKLNTLGLLPTHASDWVSSLPP--AQEVEYSG 174
BLAST of NO04G03290 vs. NCBI_GenBank
Match: XP_009615881.1 (PREDICTED: ER membrane protein complex subunit 4 [Nicotiana tomentosiformis] >XP_016496988.1 PREDICTED: ER membrane protein complex subunit 4-like [Nicotiana tabacum]) HSP 1 Score: 96.7 bits (239), Expect = 7.700e-17 Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = 0 Query: 13 SIEVEKPLGYYRESGAAQQRQVQEARAGKASIEEVNKERALKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLPASIATRAEVSG 171 S ++ PLG+ R S Q+ S E+ N E K + A +AQ+PAK L M GFMM+M GS+V + SI + +L +L + FE D + LL PKLL+IALNLV LG+G++K ++LGLLP+ A+D+VS LP A E SG Sbjct: 27 SRDIPDPLGFTRAS--------QDQDDSTLSREKKNAEANWKSQKAWEVAQAPAKNLMMMGFMMWMAGSTVHLFSIGITVSALWQPLSALQGVGKVFEPYKDSKVDLLAPKLLFIALNLVGLGLGVWKLNTLGLLPTHASDWVSSLPP--AQEVEYSG 174
BLAST of NO04G03290 vs. NCBI_GenBank
Match: XP_019225538.1 (PREDICTED: ER membrane protein complex subunit 4 [Nicotiana attenuata] >OIT32599.1 hypothetical protein A4A49_32650 [Nicotiana attenuata]) HSP 1 Score: 96.7 bits (239), Expect = 7.700e-17 Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = 0 Query: 13 SIEVEKPLGYYRESGAAQQRQVQEARAGKASIEEVNKERALKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLPASIATRAEVSG 171 S ++ PLG+ R S Q+ S E+ N E K + A +AQ+PAK L M GFMM+M GS+V + SI + +L +L + FE D + LL PKLL+IALNLV LG+G++K ++LGLLP+ A+D+VS LP A E SG Sbjct: 27 SRDIPDPLGFARAS--------QDQDDSTLSREKKNAEANWKSQKAWEVAQAPAKNLMMMGFMMWMAGSTVHLFSIGITVSALWQPLSALQGVGKVFEPYKDSKVDLLAPKLLFIALNLVGLGLGVWKLNTLGLLPTHASDWVSSLPP--AQEVEYSG 174
BLAST of NO04G03290 vs. NCBI_GenBank
Match: PTQ40500.1 (hypothetical protein MARPO_0039s0015 [Marchantia polymorpha]) HSP 1 Score: 96.7 bits (239), Expect = 7.700e-17 Identity = 67/159 (42.14%), Postives = 91/159 (57.23%), Query Frame = 0 Query: 15 EVEKPLGYYRESGAAQQRQVQEARAGKASIEEVNKERALKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLPASIATRAEVSGVPL 174 +V PLGY R S +++E+ GKA E + KQ A AQ+P K L M GFMM+M G++V + SI + +L +L A N+ FE D +T LLPKLL+IA+N LG+GL+K +SLGLLP+ A+D+VS L GVPL Sbjct: 30 DVPDPLGYSRTS-----LELEESAPGKAKKE---IDANFKQAKAWETAQAPFKNLFMIGFMMWMAGNTVHLFSIGITFSALWQPISALQAVNKTFEPFKDARTDTLLPKLLFIAMNFAGLGLGLWKLNSLGLLPTHASDWVSTLAPPTNVEFSGGGVPL 180
BLAST of NO04G03290 vs. NCBI_GenBank
Match: CCA19414.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 95.9 bits (237), Expect = 1.300e-16 Identity = 59/151 (39.07%), Postives = 88/151 (58.28%), Query Frame = 0 Query: 18 KPLGYYRESGAAQQRQVQEARAGKASIEEVNKERALKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLPASIATRAEV 169 +P+GY S + +V KA+ + R LK++ A I +P K+L FMM+M+GSS++I SIMV GM ++N+ KSL N F+ + DG L PKL+Y N + + + +YKC SLGLLP+T+AD+ LP ++T V Sbjct: 25 EPIGY---SKGIKSEKVTATTIAKAA----DSMRELKKKRASEIGMAPFKSLLQTAFMMWMSGSSINIFSIMVTGMVVMNTIKSLFDVNNAFDTVNDGVIDLTQPKLIYCLGNCISIALAIYKCGSLGLLPTTSADWTWLLPVKLSTEYSV 168
BLAST of NO04G03290 vs. NCBI_GenBank
Match: OQR96471.1 (hypothetical protein ACHHYP_15807 [Achlya hypogyna]) HSP 1 Score: 95.9 bits (237), Expect = 1.300e-16 Identity = 52/121 (42.98%), Postives = 78/121 (64.46%), Query Frame = 0 Query: 53 LKQRMAMGIAQSPAKTLAMQGFMMYMTGSSVSIISIMVVGMSLLNSFKSLLATNQCFEKLADGQTSLLLPKLLYIALNLVFLGMGLYKCSSLGLLPSTAADFVSRLPASIATRAEVSGVPL 174 LK++ A +A +P K L GFMM+M+GSS++I SIM+ M+ +N K+L N F L DG+ LL KL+++A N V +G+ LYKC ++GLLP+T++D+ LP A A + VP+ Sbjct: 43 LKKKRANEVATAPFKGLFQTGFMMWMSGSSINIFSIMITAMAFVNPVKALFNINGAFAALDDGKLDLLQFKLIFVASNFVAIGVALYKCGTMGLLPTTSSDWTWLLPVKEAVEASSAAVPI 163 The following BLAST results are available for this feature:
BLAST of NO04G03290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03290 ID=NO04G03290|Name=NO04G03290|organism=Nannochloropsis oceanica|type=gene|length=1047bpback to top protein sequence of NO04G03290.1 >NO04G03290.1-protein ID=NO04G03290.1-protein|Name=NO04G03290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=174bpback to top Synonyms
Publications
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