NO04G03250, NO04G03250 (gene) Nannochloropsis oceanica

Overview
NameNO04G03250
Unique NameNO04G03250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1489
Alignment locationchr4:904441..905929 -

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Properties
Property NameValue
DescriptionPseudouridine synthase 1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:904441..905929 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0009451RNA modification
GO:0001522pseudouridine synthesis
GO:0006396RNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom
IPR014780tRNA_psdUridine_synth_TruB
IPR002501PsdUridine_synth
Homology
BLAST of NO04G03250 vs. NCBI_GenBank
Match: XP_005855880.1 (pseudouridine synthase 1-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU20473.1 pseudouridine synthase 1-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 384.8 bits (987), Expect = 2.800e-103
Identity = 195/288 (67.71%), Postives = 226/288 (78.47%), Query Frame = 0
Query:   45 FCPPYLLSLRSSSISAAPGPDKQAVRRRTPRYAAKGDGTTTNAAIERPLLDMNGFVAVYKPKDWSSNDVVQKVRGVLEKEARQRAGTKVKVKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVEAEPRPVQVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARAHMTALVRTKQGPFFLKDCLPEETWKTDAEAIV 333
            FCP  L      S+S      ++    R  R      G T     E P L+MNG VA++KP++W+SNDVVQKVR +LEKEAR+RAG KVKVKVGHGGTLDPMATGVLVLGVG  C+DL+ YLKGSKAYRAVGLLGSEYDTMD+TG ITETVDV+HVTP++LE AL +FRG IMQRPP +SALR+ GKRLYELAR+GE VE EPR VQV+ L+L+ AE+E G  + WP+FGL IECQGGTYVRSLISD+AR+V+ARAHMTAL RTK GPF L DCLPEE WK DAEA+V
Sbjct:   54 FCPANLKVSNFRSLSPTTSCKERKYLARYERMCTV-RGATPGTTAELPPLNMNGLVAIFKPRNWTSNDVVQKVRSLLEKEARRRAGVKVKVKVGHGGTLDPMATGVLVLGVGRGCQDLNLYLKGSKAYRAVGLLGSEYDTMDATGTITETVDVSHVTPDSLEEALVSFRGCIMQRPPVYSALRRKGKRLYELARQGEDVETEPRAVQVDRLDLIHAEDETGHKLEWPYFGLAIECQGGTYVRSLISDVARSVNARAHMTALTRTKHGPFSLDDCLPEEVWKNDAEAVV 340          
BLAST of NO04G03250 vs. NCBI_GenBank
Match: EWM28783.1 (putative trna pseudouridine synthase 1 [Nannochloropsis gaditana])

HSP 1 Score: 383.3 bits (983), Expect = 8.000e-103
Identity = 195/292 (66.78%), Postives = 227/292 (77.74%), Query Frame = 0
Query:   45 FCPPYLLSLRSSSISAAPGPDKQAVRRRTPRYAAKGDGTTTNAAIERPLLDMNGFVAVYKPKDWSSNDVVQKVRGVLEKEARQRAGTKVKVKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVEAEPRPVQVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARAHMTALVRTKQGPFFLKDCLPEETWKTDAEAIVLQLV 337
            FCP  L      S+S      ++    R  R      G T     E P L+MNG VA++KP++W+SNDVVQKVR +LEKEAR+RAG KVKVKVGHGGTLDPMATGVLVLGVG  C+DL+ YLKGSKAYRAVGLLGSEYDTMD+TG ITETVDV+HVTP++LE AL +FRG IMQRPP +SALR+ GKRLYELAR+GE VE EPR VQV+ L+L+ AE+E G  + WP+FGL IECQGGTYVRSLISD+AR+V+ARAHMTAL RTK GP  L DCLPEE WK DAEA+V  L+
Sbjct:   49 FCPANLKVPNFRSLSPTRSCKERKYLARYERMCTV-RGATPGTTAELPPLNMNGLVAIFKPRNWTSNDVVQKVRSLLEKEARRRAGVKVKVKVGHGGTLDPMATGVLVLGVGRGCQDLNLYLKGSKAYRAVGLLGSEYDTMDATGTITETVDVSHVTPDSLEEALVSFRGCIMQRPPVYSALRRKGKRLYELARQGEDVETEPRAVQVDRLDLIHAEDETGHRLEWPYFGLAIECQGGTYVRSLISDVARSVNARAHMTALTRTKHGPLSLDDCLPEEVWKNDAEAVVQHLI 339          
BLAST of NO04G03250 vs. NCBI_GenBank
Match: XP_009041799.1 (hypothetical protein AURANDRAFT_5154, partial [Aureococcus anophagefferens] >EGB03470.1 hypothetical protein AURANDRAFT_5154, partial [Aureococcus anophagefferens])

HSP 1 Score: 246.5 bits (628), Expect = 1.200e-61
Identity = 134/236 (56.78%), Postives = 159/236 (67.37%), Query Frame = 0
Query:   98 GFVAVYKPKDWSSNDVVQKVRGVLEKEARQRAGTKVKVKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVEAEPRPVQVNLLNLVPAEEEAGKV---MPWPHFGLEIECQGGTYVRSLISDLAR--TVDARAHMTALVRTKQGPFFLKDCLPEETWKTDA 329
            G  AVYKP  WSS +VV K+RGVLE+  +     K KVKVGHGGTLDP+A GVLV+GVG  CR++  YLKG+K YRAV  LG E DT+D+ G + E     HVT + LEAAL AF G+I Q PP +SAL   GKRLYELAR+G  VE E RPV ++ L L   +   G V   +  PHFGL++EC GGTY+R+LISDLAR   V + AHM  L RTKQGPF L DCL E  W  DA
Sbjct:    1 GVCAVYKPPGWSSANVVAKLRGVLERAIKIPGQKKFKVKVGHGGTLDPLARGVLVVGVGRGCREMQGYLKGAKRYRAVAELGKETDTLDAEGAVVEEAPFDHVTLDALEAALPAFTGDIRQTPPMYSALHHEGKRLYELAREGIEVERESRPVTISRLAL--DDRGVGAVAGPLGLPHFGLDVECSGGTYIRTLISDLARHEAVKSVAHMVELERTKQGPFELGDCLHEADWDFDA 234          
BLAST of NO04G03250 vs. NCBI_GenBank
Match: GAX21360.1 (tRNA pseudouridine55 synthase [Fistulifera solaris])

HSP 1 Score: 207.6 bits (527), Expect = 6.000e-50
Identity = 117/260 (45.00%), Postives = 153/260 (58.85%), Query Frame = 0
Query:   73 TPRYAAKGDGTTTNAAIERPLL-DMNGFVAVYKPKDWSSNDVVQKVRGVLEKEARQRAG----TKVKVKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVEAEPRPVQVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARAHMTALVRTKQGPFFLKDCLPEETWKTD 328
            TP        T   +  + PLL    G  AV+KP +W+S++VV  +RG+LE++AR R       + ++K+GHGGTLDP+ATGVLVLGVG   + L  YL GSKAYRA   LG E +T+D  G IT      H+ P  LE     F G I Q PP FSA+++NG+RLY+ ARKG+  +       V    LV   E     +  P F +++EC GGTY+RSLI D+A  +D  A  T L RTKQGPF L+DCL +E W  D
Sbjct:    3 TPTTTVWQSSTAAASDDDVPLLYRAEGLFAVHKPLNWTSSNVVSYIRGILERDARTRGAKLPRRRPRIKIGHGGTLDPLATGVLVLGVGKGTKQLESYLSGSKAYRAGAALGFETNTLDMEGNITRRATFDHIQPIDLERVRPHFVGTIEQIPPLFSAIKQNGQRLYQKARKGQTDDD-----VVIASRLVTIHELQFGNVDLPQFDIQVECGGGTYIRSLIRDIAYQLDTVATTTYLQRTKQGPFTLEDCLEKEDWNAD 257          
BLAST of NO04G03250 vs. NCBI_GenBank
Match: XP_005780927.1 (tRNA pseudouridine synthase, partial [Emiliania huxleyi CCMP1516] >EOD28498.1 tRNA pseudouridine synthase, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 203.8 bits (517), Expect = 8.700e-49
Identity = 110/219 (50.23%), Postives = 142/219 (64.84%), Query Frame = 0
Query:   98 GFVAVYKPKDWSSNDVVQKVRGVLEKEARQRAGT---KVKVKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVE--AEPRPVQVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARAHMTALVRTKQG 312
            G V  YKP +W+S DVV K RG LE + ++   T   + ++KVGHGGTLDP+A G+LVLG+GT C+ L  YLKG KAYRA   LG+E DT DS+G IT +    HVT   L  A     G+I+QRPP +SAL++ GK L+ELAR G++ E   EPR V V+ L +   + E+G       F L ++C GGTYVR+LI DL R V + AHMT LVRT+ G
Sbjct:    1 GIVVAYKPTNWTSFDVVAKARGCLEADLKKAGHTFRRRSRLKVGHGGTLDPLAEGLLVLGIGTGCKGLEGYLKGGKAYRATARLGTETDTQDSSGAITRSEPAEHVTLAALRDAAAGLTGSILQRPPIYSALKRGGKPLHELARAGKIEEGDVEPRRVTVHSLEVSRFDAESGS------FELLVDCAGGTYVRTLIVDLGRAVGSAAHMTGLVRTRVG 213          
BLAST of NO04G03250 vs. NCBI_GenBank
Match: XP_005771422.1 (hypothetical protein EMIHUDRAFT_44604, partial [Emiliania huxleyi CCMP1516] >EOD18993.1 hypothetical protein EMIHUDRAFT_44604, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 201.8 bits (512), Expect = 3.300e-48
Identity = 109/219 (49.77%), Postives = 141/219 (64.38%), Query Frame = 0
Query:   98 GFVAVYKPKDWSSNDVVQKVRGVLEKEARQRAGT---KVKVKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVE--AEPRPVQVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARAHMTALVRTKQG 312
            G V  YKP +W+S DVV K RG LE + ++   T   + ++KVGHGGTLDP+A G+LVLG+G  C+ L  YLKG KAYRA   LG+E DT DS+G IT +    HVT   L  A     G+I+QRPP +SAL++ GK L+ELAR G++ E   EPR V V+ L +   + E+G       F L ++C GGTYVR+LI DL R V + AHMT LVRT+ G
Sbjct:    1 GIVVAYKPTNWTSFDVVAKARGCLEADLKKAGHTFRRRSRLKVGHGGTLDPLAEGLLVLGIGAGCKGLEGYLKGGKAYRATARLGTETDTQDSSGAITRSEPAEHVTLAALRDAAAGLTGSILQRPPIYSALKRGGKPLHELARAGKIEEGDVEPRRVTVHSLEVSRFDAESGS------FELLVDCAGGTYVRTLIVDLGRAVGSAAHMTGLVRTRVG 213          
BLAST of NO04G03250 vs. NCBI_GenBank
Match: XP_002941103.1 (PREDICTED: probable tRNA pseudouridine synthase 1 [Xenopus tropicalis] >OCA27479.1 hypothetical protein XENTR_v90017346mg [Xenopus tropicalis])

HSP 1 Score: 195.3 bits (495), Expect = 3.100e-46
Identity = 118/247 (47.77%), Postives = 152/247 (61.54%), Query Frame = 0
Query:   93 LLDMNGFVAVYKPKDWSSNDVVQKVRGVLEKEARQRAGTKVK---VKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVEAEP-RPVQVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARAHMTALVRTKQGPFFLKD-CLPEETWKTDAEAIVLQ 335
            LL ++G   VYKPK  +S  VV +++G L KEA  +   K +   +K+GHGGTLD  A+GVLV+G+G   + LS  L GSK Y  VG LG   DT+D++G +TE     H+T E LE AL  F GNIMQ PP FSAL+++GKRL  L R G  VEA+P RPV V  L+L   +         P F L++EC GG YVRSL++DL + + + A +  LVRTKQGPF L+D  L EE W     A  LQ
Sbjct:    9 LLALSGLFPVYKPKGPTSAQVVAQLKGSLLKEAGLKEYVKKRKQTLKIGHGGTLDSSASGVLVIGIGDGTKMLSTMLAGSKKYTTVGELGKATDTLDASGTVTEEKPYDHITKEDLEGALKLFTGNIMQVPPLFSALKRDGKRLSCLLRDGAEVEAKPARPVTVYQLSLRDFQP--------PVFTLDVECGGGFYVRSLVNDLGKALKSCASVKELVRTKQGPFTLEDHTLKEEDWNISRIAQALQ 247          
BLAST of NO04G03250 vs. NCBI_GenBank
Match: XP_010587273.1 (probable tRNA pseudouridine synthase 1 [Loxodonta africana])

HSP 1 Score: 195.3 bits (495), Expect = 3.100e-46
Identity = 115/258 (44.57%), Postives = 158/258 (61.24%), Query Frame = 0
Query:   85 TNAAIERPLLDMNGFVAVYKPKDWSSNDVVQKVRGVLEKEA-----RQRAGTKVKVKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVEAEP-RPVQVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARAHMTALVRTKQGPFFLKD-CLPEETWKTDAEAIVLQL 336
            T +A+   LL +NG  AV+KPK  +S +++ +++  L  EA     +     K   K+GHGGTLD  A GVLV+GVG   + L+  L G+K Y A G LG   DT+DSTG++TE      +T E +E  L  F GNIMQ PP +SAL+K+G+RL  L ++GE VEA+P RPV V  ++L        K  P P F L++EC GG Y+RSL+SD+ + + + A++  L RTKQGPF L+D  LPEE W  D  A  L+L
Sbjct:  140 TKSAMANKLLSLNGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPLPKCNKRKKQTFKIGHGGTLDSAAKGVLVVGVGRGTKMLTSMLSGTKRYIATGELGKATDTLDSTGKVTEEKPYDKITQEDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEAVEAKPARPVTVYSISL-------QKFQP-PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEDHALPEEKWTIDDIAQALEL 389          
BLAST of NO04G03250 vs. NCBI_GenBank
Match: XP_006879978.1 (PREDICTED: probable tRNA pseudouridine synthase 1 [Elephantulus edwardii])

HSP 1 Score: 194.5 bits (493), Expect = 5.300e-46
Identity = 116/256 (45.31%), Postives = 158/256 (61.72%), Query Frame = 0
Query:   87 AAIERPLLDMNGFVAVYKPKDWSSNDVVQKVRGVLEKEA-----RQRAGTKVKVKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVEAEP-RPVQVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARAHMTALVRTKQGPFFLKD-CLPEETWKTDAEAIVLQL 336
            +A+   LL +NG  AV+KPK  +S +++ +++  L  EA     +     K   K+GHGGTLD  A GVLV+GVG   + L+  L G+K Y AVG LG   DT+DSTG+ITE      +T E +E  L  F GNIMQ PP +SAL+K+G+RL  L ++GE VEA+P RPV V  ++L        K  P P F L++EC GG Y+RSL+SD+ + + + A++  L RTKQGPF L+D  LPEE W  D  A  L+L
Sbjct:   60 SAMANKLLSLNGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPPPKCNKRKKQTFKIGHGGTLDSAAKGVLVVGVGRGTKMLTSMLSGTKRYIAVGELGKATDTLDSTGKITEEKPYDKITQEDIEGILEKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEAVEAKPARPVTVYSISL-------QKFQP-PLFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEDHALPEEKWTIDDIAQALEL 307          
BLAST of NO04G03250 vs. NCBI_GenBank
Match: XP_005874562.1 (PREDICTED: probable tRNA pseudouridine synthase 1 [Myotis brandtii] >EPQ12863.1 Putative tRNA pseudouridine synthase 1 [Myotis brandtii])

HSP 1 Score: 193.7 bits (491), Expect = 9.000e-46
Identity = 111/250 (44.40%), Postives = 156/250 (62.40%), Query Frame = 0
Query:   85 TNAAIERPLLDMNGFVAVYKPKDWSSNDVVQKVRGVLEKEARQRAGTKVK-----VKVGHGGTLDPMATGVLVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHVTPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVEAEP-RPVQVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARAHMTALVRTKQGPFFLKD-CLPEETWKTD 328
            + AA+   LL ++G  AV+KPK  +S +++ +++  L  EA   +    K     +K+GHGGTLD  A GVLV+G+G   + L+  L GSK Y A+G LG   DT+DSTG++TE      +T E +E  L  F GNIMQ PP +SAL+K+G+RL  L ++GEVVEA+P RPV V  L+L        K  P P F L++EC GG Y+RSL+SD+ + + + A++  L RTKQGPF L +  LPE+ W  D
Sbjct:   47 SKAALATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSAELTKRKRQTLKIGHGGTLDSAARGVLVIGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDQITQEDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLVKRGEVVEAKPARPVTVYSLSL-------QKFQP-PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLDEHALPEDKWTID 288          
The following BLAST results are available for this feature:
BLAST of NO04G03250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855880.12.800e-10367.71pseudouridine synthase 1-like protein, partial [Na... [more]
EWM28783.18.000e-10366.78putative trna pseudouridine synthase 1 [Nannochlor... [more]
XP_009041799.11.200e-6156.78hypothetical protein AURANDRAFT_5154, partial [Aur... [more]
GAX21360.16.000e-5045.00tRNA pseudouridine55 synthase [Fistulifera solaris... [more]
XP_005780927.18.700e-4950.23tRNA pseudouridine synthase, partial [Emiliania hu... [more]
XP_005771422.13.300e-4849.77hypothetical protein EMIHUDRAFT_44604, partial [Em... [more]
XP_002941103.13.100e-4647.77PREDICTED: probable tRNA pseudouridine synthase 1 ... [more]
XP_010587273.13.100e-4644.57probable tRNA pseudouridine synthase 1 [Loxodonta ... [more]
XP_006879978.15.300e-4645.31PREDICTED: probable tRNA pseudouridine synthase 1 ... [more]
XP_005874562.19.000e-4644.40PREDICTED: probable tRNA pseudouridine synthase 1 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL076nonsL076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR106ngnoR106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009473NSK009473Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03250.1NO04G03250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579072gene_2100Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g63gene1867Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03250.1NO04G03250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03250 ID=NO04G03250|Name=NO04G03250|organism=Nannochloropsis oceanica|type=gene|length=1489bp
CCTGTCTTGAGCCCGGGACCTCTCAGGCTGGCTCGGGTCATTTTTCAACC
TGATTTTCAGTTGTAACTTCAGAATGTCACTGGATGCCCAATACTCATAT
AACCTGAACTATGGTACGAAATTTGGTCCGTGGTAAGCATGTCACAAGCG
GCCCCTCTCCGGCGATTTTGCAGTAGTGTAAATGACACGTTTCGCGGACA
AACCTCCCCATTCCATCCTCATCCCAGTCTCCCATCGCACGAATCCTAGG
CAATATAAGCATGGCAAAAGACTAAACCCAATCCACCAAAGCCATATTAT
ATTAGAACATTTGATTTCGAGCAGATGGCCTGGTCGCAACAACCTCCTTT
CCTCGGAGCTCTTCAACTCCTTTTCCTCGCCTCTACAGTCAGCACAGCAT
CAAGCGTGAACCCTAAGGTAGCTTTTGTCCATGGTCTTGCCCGGACCACG
TCCCTCTTCTGTCCACCATACTTATTGTCACTTCGGTCTAGCAGTATTTC
CGCAGCACCCGGCCCAGACAAGCAAGCTGTCCGAAGACGCACACCAAGAT
ACGCCGCGAAAGGAGACGGGACGACGACAAATGCAGCCATCGAGCGGCCA
CTCTTGGACATGAACGGCTTCGTGGCAGTGTACAAACCGAAGGATTGGTC
CTCAAACGATGTCGTTCAAAAAGTTCGCGGGGTTTTGGAGAAGGAAGCGA
GACAGAGAGCAGGTACCAAAGTGAAAGTCAAGGTTGGGCATGGCGGGACC
CTCGACCCCATGGCCACGGGCGTCCTGGTCCTGGGGGTGGGTACTGCTTG
CCGAGATCTCAGCTTTTATCTGAAAGGTTCCAAAGCTTACCGGGCTGTTG
GTTTGTTGGGCTCGGAGTACGATACAATGGATTCCACGGGCCAAATAACC
GAGACAGTGGATGTAGCGCATGTGACGCCCGAAACTCTCGAAGCGGCCTT
AGGGGCGTTCCGTGGCAACATCATGCAGCGGCCACCTGCATTTTCTGCTC
TGAGAAAGAATGGGAAACGTCTTTATGAGCTGGCCCGCAAGGGAGAAGTG
GTGGAGGCGGAGCCCCGGCCCGTACAGGTTAATCTTTTGAATTTAGTCCC
AGCAGAAGAGGAGGCCGGGAAAGTGATGCCTTGGCCGCACTTTGGATTAG
AAATTGAGTGCCAGGGTGGAACGTACGTACGCTCGCTCATTTCAGACCTG
GCTCGGACTGTAGATGCACGCGCACACATGACCGCTCTGGTGCGGACGAA
GCAGGGACCTTTTTTCCTTAAGGATTGCTTGCCCGAGGAGACTTGGAAGA
CCGACGCCGAAGCCATTGTCCTTCAACTTGTAAAGAAGTAAATTCAAGAA
AGTGAAATAAGTGGAACATTAAGATGAAAATGCTGTTTAGTAGCATATTT
TTTCAAGTGTAGATGATGAGCATACTCTTGCGCACAACTGACGCATCTAC
ACAAAACAAAAACAAGCAGGCAGGGGCTGCATTTATCGG
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protein sequence of NO04G03250.1

>NO04G03250.1-protein ID=NO04G03250.1-protein|Name=NO04G03250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=339bp
MAWSQQPPFLGALQLLFLASTVSTASSVNPKVAFVHGLARTTSLFCPPYL
LSLRSSSISAAPGPDKQAVRRRTPRYAAKGDGTTTNAAIERPLLDMNGFV
AVYKPKDWSSNDVVQKVRGVLEKEARQRAGTKVKVKVGHGGTLDPMATGV
LVLGVGTACRDLSFYLKGSKAYRAVGLLGSEYDTMDSTGQITETVDVAHV
TPETLEAALGAFRGNIMQRPPAFSALRKNGKRLYELARKGEVVEAEPRPV
QVNLLNLVPAEEEAGKVMPWPHFGLEIECQGGTYVRSLISDLARTVDARA
HMTALVRTKQGPFFLKDCLPEETWKTDAEAIVLQLVKK*
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Synonyms
Publications