NO04G03230, NO04G03230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03230 vs. NCBI_GenBank
Match: EWM28811.1 (pin domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 363.6 bits (932), Expect = 6.800e-97 Identity = 197/268 (73.51%), Postives = 224/268 (83.58%), Query Frame = 0 Query: 90 SRDGVVRYGTKGRKKHRTS-RCRK-SDDGEYCEDS----DECEAPRVSSQINIPVRRQIAFVKQMKKLMKAEERPK-EVAKKVRRKKDSAQREAISGDYARFDQTMCSTYLLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDEHTPGAELRVMEGDVDEVYTGALDSADSYIERRAVELCKKSAGPRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARRELLFQRDNSDWRSKKAFDDAQEYFID 351 +R V + ++ KK RTS R RK S D E ++ D+ +APRVSSQINIPVRRQIAFVKQMKK++K EERP V KK R+KK QREAI+ DYA F ++C+TYLLVDGYNVINNW+KMIKARS+AGMPSARQALLEQLRYI+HSRRWKVVVAYDEHTPG+ELR+MEGDVDEV+TG DSADSYIERRAVELCK RVKVATDDRTIQVVS+ASGAE MSTSSLI+EIYLARRELLFQRD +DWR+ K+FDDAQEYF+D Sbjct: 79 TRQQVACFASRASKKRRTSGRIRKESADNERNDEGGIQRDQQDAPRVSSQINIPVRRQIAFVKQMKKIVKEEERPNTAVTKKARKKKVLGQREAIASDYASFKPSVCTTYLLVDGYNVINNWTKMIKARSVAGMPSARQALLEQLRYIHHSRRWKVVVAYDEHTPGSELRIMEGDVDEVFTGERDSADSYIERRAVELCKSGDVLRVKVATDDRTIQVVSMASGAETMSTSSLIREIYLARRELLFQRDGTDWRTTKSFDDAQEYFVD 346
BLAST of NO04G03230 vs. NCBI_GenBank
Match: WP_041243740.1 (NYN domain-containing protein [Gloeobacter kilaueensis]) HSP 1 Score: 88.6 bits (218), Expect = 4.200e-14 Identity = 52/143 (36.36%), Postives = 82/143 (57.34%), Query Frame = 0 Query: 186 QTMCSTYLLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDEHTPGAEL--RVMEGDVDEVYTGALDSADSYIERRAVELCKKSAGPRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARREL 327 +T T LLVDGYNV+ +W K+++ R + +AR AL+EQL R + V+ +D + L +V ++ +T +ADS+IE+ + EL ++ G RV VAT DR Q++ LA GA +S L+KE+ AR ++ Sbjct: 2 ETAVQTILLVDGYNVVGSWPKLVRLRDSVSLEAARNALIEQLADFASFRGYYTVLVFDSQLVLSPLARKVETASLEICFTDYEQTADSFIEKFSYELLRE--GRRVMVATSDRAQQLLILAQGAGWLSAQQLLKEVKAARHQM 142
BLAST of NO04G03230 vs. NCBI_GenBank
Match: WP_011142986.1 (NYN domain-containing protein [Gloeobacter violaceus] >NP_925939.1 hypothetical protein glr2993 [Gloeobacter violaceus PCC 7421] >BAC90934.1 glr2993 [Gloeobacter violaceus PCC 7421]) HSP 1 Score: 87.8 bits (216), Expect = 7.200e-14 Identity = 57/152 (37.50%), Postives = 87/152 (57.24%), Query Frame = 0 Query: 191 TYLLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDEHTPGAEL-RVMEGDVDEV-YTGALDSADSYIERRAVELCKKSAGPRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARRELLFQRDNSDWRSKKA 341 T LLVDGYNV+ W ++ + R + +AR L+EQL R ++ V+ +D + L R E EV +T +ADS+IE+ + +L +++ RV VAT DR QV+ LA GA+ +S+ L+KE+ ARR+L D R++KA Sbjct: 3 TILLVDGYNVVGAWPRLARLRDRHSLEAARNELVEQLAGYASFRGYRAVLVFDAQLVTSPLVRASETPHLEVCFTDYEQTADSFIEQYSYQLLRENRRRRVMVATSDRAQQVLVLAQGADWLSSEQLLKEVEAARRQL-----REDLRNRKA 149
BLAST of NO04G03230 vs. NCBI_GenBank
Match: GAQ88575.1 (hypothetical protein KFL_004410030 [Klebsormidium nitens]) HSP 1 Score: 87.4 bits (215), Expect = 9.400e-14 Identity = 86/257 (33.46%), Postives = 116/257 (45.14%), Query Frame = 0 Query: 87 ACNSRDGVVRYGTKGRKKHRTSRCRKSDDGEYCEDSDECEAPRVSSQINIPVRRQIAFVKQMKKLMK-AEERPKEVAKKVRRKKD--SAQREAISGDYARFDQTMCS-----------TYLLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDEHTPGAELRVMEGDVDEVYTGALDSADSYIERRAVELCKKSAGPRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARRELLFQ 330 +C R G + G K K KSD D + PRVS+ INIPVR Q+ +VK +K+ K A P A RRKK+ S SGD ++ LLVDGYN+ W K+ K S + +AR L+ +L+ + KVVV +D G + +V A D+ADS+IER A L K V V T D Q ++ GA + S LI+EI AR+E+L Q Sbjct: 124 SCRRRRGRITCGAKKGAKGGGDEGPKSD-----TDGRQSTPPRVSTNINIPVRYQLRYVKALKEYQKNASGPPVRQATGYRRKKERPSESSGVASGDVVAPSTSLMGQGVMEELNLEPPVLLVDGYNMCGYWPKLKKHFSKGDLEAARAKLIVELQTYGACKGIKVVVVFDAQKSGLQSHSEGDKYLKVVYSADDTADSWIEREAKNLHDK-GNHNVWVVTSDLAQQSMAYGVGATVWSCGLLIQEINQARKEMLKQ 374
BLAST of NO04G03230 vs. NCBI_GenBank
Match: AGY57298.1 (hypothetical protein GKIL_1052 [Gloeobacter kilaueensis JS1]) HSP 1 Score: 86.7 bits (213), Expect = 1.600e-13 Identity = 51/138 (36.96%), Postives = 80/138 (57.97%), Query Frame = 0 Query: 191 TYLLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDEHTPGAEL--RVMEGDVDEVYTGALDSADSYIERRAVELCKKSAGPRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARREL 327 T LLVDGYNV+ +W K+++ R + +AR AL+EQL R + V+ +D + L +V ++ +T +ADS+IE+ + EL ++ G RV VAT DR Q++ LA GA +S L+KE+ AR ++ Sbjct: 3 TILLVDGYNVVGSWPKLVRLRDSVSLEAARNALIEQLADFASFRGYYTVLVFDSQLVLSPLARKVETASLEICFTDYEQTADSFIEKFSYELLRE--GRRVMVATSDRAQQLLILAQGAGWLSAQQLLKEVKAARHQM 138
BLAST of NO04G03230 vs. NCBI_GenBank
Match: CBJ31618.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 83.2 bits (204), Expect = 1.800e-12 Identity = 61/188 (32.45%), Postives = 97/188 (51.60%), Query Frame = 0 Query: 148 MKKLMKAEERPKE-VAKKVRRKKDSAQREAIS-GDYARFDQTMCSTYLLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDEHTPGAELR--VMEGDVDEVYTGALDSADSYIERRAVELCKKSAGPRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARRELLFQRD 332 M+K M+ PK+ V K RR K++ + + D + + L+VDGYN+I +WSK + AR+ L+E+L + R W V V +D + R V ++D V+T +SAD Y+ER +L K S P V VAT D+ +Q + + +GAE+ S +I+EI ++ E + D Sbjct: 1 MRKSMERSNGPKKMVHNKYRRVKNTDYEDIVEPEDLSHIYMPDIAPALMVDGYNIIFHWSKCSIVADNGDLEGARRILVEELDTLAAMRGWTVTVVFDAYKRKGRARKYVTPNEIDVVFTSNGESADMYVERLTEQL-KDSGCPNVMVATGDKLMQSLVVGAGAEVFSPDRIIEEIEISHSEAVAYTD 187
BLAST of NO04G03230 vs. NCBI_GenBank
Match: WP_035381815.1 (NYN domain-containing protein [Fervidicella metallireducens] >EYE87222.1 tetracycline resistance protein [Fervidicella metallireducens AeB]) HSP 1 Score: 77.8 bits (190), Expect = 7.500e-11 Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 0 Query: 192 YLLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDEH-TPGAELR-VMEGDVDEVYTGALDSADSYIERRAVELCKKSAGPRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARREL 327 YL VDGYN+IN+W K +K + AR L++ LR + K++V +D H G+ ++ + +G++D V+T ++AD YIER EL +K+ V VAT D Q + L G ++ + L+ EI L + ++ Sbjct: 6 YLFVDGYNIINSW-KELKVLKDENLEDARDKLVDMLREFAAYKGIKIIVVFDAHMVKGSSVKHIKQGEIDVVFTKEQETADCYIERNVAELSRKN---EVYVATSDYLEQRIVLQMGGIRITPAELLNEISLTKTKI 138
BLAST of NO04G03230 vs. NCBI_GenBank
Match: XP_005824212.1 (hypothetical protein GUITHDRAFT_145185 [Guillardia theta CCMP2712] >EKX37232.1 hypothetical protein GUITHDRAFT_145185 [Guillardia theta CCMP2712]) HSP 1 Score: 76.6 bits (187), Expect = 1.700e-10 Identity = 66/233 (28.33%), Postives = 113/233 (48.50%), Query Frame = 0 Query: 111 RKSDDGEYCEDSDECEAPRVSSQINIPVRRQIAFVKQMKKLMKAEERPKEVAKKVRR-------KKDSAQREAISGDYARFDQTMCSTYLLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDE--HTPG---AELRVMEGDVDEVYTGALDSADSYIERRAVELC--KKSAG---PRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARREL 327 ++ GE + + +PR+ S I I ++ Q+ VK +++ +A + K RR K+D E +S +AR D VDGYNVI W+K+ K R + AR L +++ H R + + YD +T G + + V+ VY +SAD+YI+ R E+ K+ G P+V + + DR I ++ GA ++S++ I+EI A++E+ Sbjct: 45 KQGSSGEASDGGEGRMSPRIRSDIGISMKTQLKIVKAYREMERASTK-MVTRTKFRRAKASGPGKEDEMGPEVLSNIWARED---VPPIFFVDGYNVIGQWNKLKKKRDNGDISGARDVLYDEISQFAHYRGCQCTIVYDAVGYTAGLPITQAEMTRAGVEVVYVRD-ESADTYIQARTAEISTWKEKDGIKPPKVYMCSSDRAISDIATGHGALVLSSALFIQEIKRAKKEM 272
BLAST of NO04G03230 vs. NCBI_GenBank
Match: WP_068871315.1 (NYN domain-containing protein [Planococcus plakortidis] >ANU20897.1 hypothetical protein BBI15_12200 [Planococcus plakortidis]) HSP 1 Score: 76.6 bits (187), Expect = 1.700e-10 Identity = 51/155 (32.90%), Postives = 80/155 (51.61%), Query Frame = 0 Query: 193 LLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDEH-TPGAELRVMEGDVDEVYTGALDSADSYIERRAVELCKKSAGPRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARRELLFQRDNSDWRSKKAFDDAQE 347 LLVDGYN+I +W + +KA + AR L+E++ + W+V+V +D H PG E + + DV+ ++T + ++AD IE+ A L S ++ VAT D T Q V A GA + ++ REL + + D R K + QE Sbjct: 4 LLVDGYNIIGDWEE-LKALKKERLADARDKLIERMAEYQGFKGWRVIVVFDAHLVPGIEAKNLHSDVEVIFTRSSETADERIEKLAASL--NSRRDQIYVATSDSTEQWVIFAKGA-----------LRISARELEIEMEEIDKRIAKKVREIQE 144
BLAST of NO04G03230 vs. NCBI_GenBank
Match: WP_058382189.1 (NYN domain-containing protein [Planococcus rifietoensis] >ALS75485.1 hypothetical protein AUC31_09770 [Planococcus rifietoensis]) HSP 1 Score: 76.3 bits (186), Expect = 2.200e-10 Identity = 49/155 (31.61%), Postives = 81/155 (52.26%), Query Frame = 0 Query: 193 LLVDGYNVINNWSKMIKARSIAGMPSARQALLEQLRYIYHSRRWKVVVAYDEH-TPGAELRVMEGDVDEVYTGALDSADSYIERRAVELCKKSAGPRVKVATDDRTIQVVSLASGAEMMSTSSLIKEIYLARRELLFQRDNSDWRSKKAFDDAQE 347 LLVDGYN+I +W+++ + + AR L+E++ + W+V+V +D H PG E + + DV+ ++T + ++AD IE+ A+ L S ++ VAT D T Q V A GA + ++ REL + + D R K + QE Sbjct: 4 LLVDGYNIIGDWAELTALKK-ERLADARDRLIERMAEYQGFKGWRVIVVFDAHLVPGIEAKNLHSDVEVIFTRSSETADERIEKLAISL--NSRRDQIYVATSDSTEQWVIFAKGA-----------LRISARELEIEMEEIDKRIAKKVREIQE 144 The following BLAST results are available for this feature:
BLAST of NO04G03230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03230 ID=NO04G03230|Name=NO04G03230|organism=Nannochloropsis oceanica|type=gene|length=1563bpback to top protein sequence of NO04G03230.1 >NO04G03230.1-protein ID=NO04G03230.1-protein|Name=NO04G03230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=351bpback to top Synonyms
Publications
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