NO04G03210, NO04G03210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03210 vs. NCBI_GenBank
Match: EWM28797.1 (erg28 like protein [Nannochloropsis gaditana]) HSP 1 Score: 162.2 bits (409), Expect = 1.200e-36 Identity = 93/165 (56.36%), Postives = 109/165 (66.06%), Query Frame = 0 Query: 1 MKNLLRVWLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVRSAMPPFIIAT--------------------------------LSVLLLAAGYSYIVVEDGGSTK 134 MK LLR+WLI VA LRVLSV+LGY PATL +SVFG A QVTPLTARTFG WTLLS+++TLMCALNIESGPLYRTTMASF +A+++F LE +Y TVD+RSAM PFIIA+ S L++A YS IVVED +K Sbjct: 1 MKTLLRIWLISVAFLRVLSVILGYFYPATLGESVFGRALSQVTPLTARTFGTWTLLSSVVTLMCALNIESGPLYRTTMASFVIAIVFFFLEFEMYRTVDMRSAMTPFIIASKLKSCASSIFDFPICVQESAYLSFTSGLNTTATSTLVMAIAYSSIVVEDTKKSK 165
BLAST of NO04G03210 vs. NCBI_GenBank
Match: XP_005855885.1 (erg28 like protein, partial [Nannochloropsis gaditana CCMP526] >EKU20478.1 erg28 like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 161.4 bits (407), Expect = 2.000e-36 Identity = 83/110 (75.45%), Postives = 95/110 (86.36%), Query Frame = 0 Query: 1 MKNLLRVWLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVRSAMPPFIIA 111 MK LLR+WLI VA LRVLSV+LGY PATL +SVFG A QVTPLTARTFG WTLLS+++TLMCALNIESGPLYRTTMASF +A+++F LEV +Y TVD+RSAM PFIIA Sbjct: 13 MKTLLRIWLISVAFLRVLSVILGYFYPATLGESVFGRALSQVTPLTARTFGTWTLLSSVVTLMCALNIESGPLYRTTMASFVIAIVFFFLEVEMYRTVDMRSAMTPFIIA 122
BLAST of NO04G03210 vs. NCBI_GenBank
Match: XP_011396039.1 (putative ergosterol biosynthetic protein 28 [Auxenochlorella protothecoides] >KFM23169.1 putative ergosterol biosynthetic protein 28 [Auxenochlorella protothecoides]) HSP 1 Score: 97.8 bits (242), Expect = 2.700e-17 Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = 0 Query: 5 LRVWLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVRSAMPPFIIATLSVLLLAAGYSY 124 LR WL+ VA LR+L+VV+G+ P L +++ V L RTF +WTL S+++ L+CA N +Y T+ASFA+ALL+F+LE+ V+ T+D R A+ P I+AT+SVL + AG++Y Sbjct: 7 LRRWLVFVALLRLLAVVIGFGSPDKLRTNLYNRKPFLVNDLQGRTFAVWTLTSSVLCLICARNPCVPSIYGATLASFAIALLHFLLELTVFGTLDWRGALQPGIVATVSVLWMGAGWNY 125
BLAST of NO04G03210 vs. NCBI_GenBank
Match: GAX77307.1 (hypothetical protein CEUSTIGMA_g4753.t1 [Chlamydomonas eustigma]) HSP 1 Score: 97.1 bits (240), Expect = 4.600e-17 Identity = 46/115 (40.00%), Postives = 74/115 (64.35%), Query Frame = 0 Query: 8 WLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVRSAMPPFIIATLSVLLLAAGYS 123 WL+ ASLR+ SV +G+ P ++F + VT R FG WTL++ ++ ++CA NI + +Y T+ SF +A LY VLE+ VY T+D+R A+ P ++A +S++ ++AGYS Sbjct: 46 WLLIAASLRIFSVWIGFFSPVKFQIALFRRKPEVVTEAFGRLFGTWTLVTCLLCVICAFNINNEAIYGATLGSFVIAFLYMVLELAVYKTIDMRGAISPMLVAGISIVWMSAGYS 160
BLAST of NO04G03210 vs. NCBI_GenBank
Match: PSC67555.1 (hypothetical protein C2E20_8779 [Micractinium conductrix]) HSP 1 Score: 94.0 bits (232), Expect = 3.900e-16 Identity = 51/119 (42.86%), Postives = 76/119 (63.87%), Query Frame = 0 Query: 5 LRVWLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVRSAMPPFIIATLSVLLLAAGYSY 124 LR WL+ VA LR+ SVVLGY +P +++ D VT L R F WTL S I+ L+CA N +Y T+ASF VALL+F++E+ ++ T+ ++ A+ P +AT+S L +A G++Y Sbjct: 7 LRRWLVFVALLRLFSVVLGYAEPQRFQTNLYNKQPDGVTDLAGRIFATWTLTSCILCLICARNPCVPAIYGATLASFLVALLHFLMELTLFQTMSLKFALQPMAVATISSLWMALGWNY 125
BLAST of NO04G03210 vs. NCBI_GenBank
Match: XP_002951951.1 (hypothetical protein VOLCADRAFT_105276 [Volvox carteri f. nagariensis] >EFJ47056.1 hypothetical protein VOLCADRAFT_105276 [Volvox carteri f. nagariensis]) HSP 1 Score: 91.7 bits (226), Expect = 1.900e-15 Identity = 53/129 (41.09%), Postives = 79/129 (61.24%), Query Frame = 0 Query: 5 LRVWLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVRSAMPPFIIATLSVLLLAAGYSYIVVEDGGSTK 134 L+ WL+ VASLR+L+VV+G P L VF + V+ L R F WTL++ + L CA++ + +Y TT+ SF VALL+F+ E+ VY TV +R A+ P IIA++S L+ G+ + GST+ Sbjct: 20 LKRWLVVVASLRMLAVVIGIFAPNKLKSQVFDRKPELVSNLLGRLFAAWTLMTCALCLACAMDPSNKTVYGTTLFSFVVALLFFLSELLVYKTVTIRGALSPMIIASISTAWLSLGWDFYT----GSTR 144
BLAST of NO04G03210 vs. NCBI_GenBank
Match: XP_001693446.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 86.3 bits (212), Expect = 8.100e-14 Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 0 Query: 5 LRVWLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVRSAMPPFIIATLSVLLLAAGYSY 124 L+ WL+ VA LR+L+VV+G P L VF + VTPL R F WTL++ + L CA + + +Y TT+ SFAVAL +F+ E+ ++ T+ +R A+ P I+A++S L G + Sbjct: 8 LQRWLVLVAGLRMLAVVIGIFAPNKLKSQVFDRRPELVTPLLGRLFATWTLMTCALCLACARDPSNKTVYLTTLFSFAVALAFFLGELLIFKTLSIRGAISPMIVASISTTWLTLGLDF 126
BLAST of NO04G03210 vs. NCBI_GenBank
Match: XP_006823047.1 (PREDICTED: probable ergosterol biosynthetic protein 28-like [Saccoglossus kowalevskii]) HSP 1 Score: 85.9 bits (211), Expect = 1.100e-13 Identity = 50/125 (40.00%), Postives = 78/125 (62.40%), Query Frame = 0 Query: 1 MKNLLRVWLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVR-SAMPPFIIATLSVLLLAAGYSYI 125 M+++LR W+ VA + V + V ++ LA ++ A + V PL AR FG+WTLL+AI+ AL+I P+Y T+ SF +AL++FVLE VY + + + P +++ LSV+L+ GYSYI Sbjct: 6 MESILRGWIALVAMMAVGNTVQCFVDERFLANKLYTGAAESVNPLMARLFGVWTLLAAIVRFYGALHITIQPIYNLTLISFILALVHFVLESFVYKSAPMSIGVIAPLLVSGLSVILMVIGYSYI 130
BLAST of NO04G03210 vs. NCBI_GenBank
Match: OPJ83244.1 (putative ergosterol biosynthetic protein 28 [Patagioenas fasciata monilis]) HSP 1 Score: 84.3 bits (207), Expect = 3.100e-13 Identity = 45/134 (33.58%), Postives = 82/134 (61.19%), Query Frame = 0 Query: 3 NLLRVWLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVR-SAMPPFIIATLSVLLLAAGYSYIVVEDGGSTKRR 136 N+LR WL+ V+ + + + + + L++ ++ + V L ARTFG+WTLLS++I +CA++I + LY T+ +F +AL++F+ EV +YHT + M P ++A+ S+L + G Y+ VE+ K++ Sbjct: 6 NVLRSWLVMVSVIAAGNTLQSFRDHSFLSEKLYTTSPGLVNGLQARTFGVWTLLSSVIRCLCAIDIRNRTLYYITLFTFFLALVHFLSEVFIYHTAALTIGVMAPLMVASFSILGMLIGLQYLEVEELSQNKKK 139
BLAST of NO04G03210 vs. NCBI_GenBank
Match: XP_014797503.1 (PREDICTED: probable ergosterol biosynthetic protein 28 [Calidris pugnax] >XP_014797504.1 PREDICTED: probable ergosterol biosynthetic protein 28 [Calidris pugnax]) HSP 1 Score: 83.6 bits (205), Expect = 5.300e-13 Identity = 45/134 (33.58%), Postives = 81/134 (60.45%), Query Frame = 0 Query: 3 NLLRVWLICVASLRVLSVVLGYLQPATLAKSVFGLATDQVTPLTARTFGIWTLLSAIITLMCALNIESGPLYRTTMASFAVALLYFVLEVGVYHTVDVR-SAMPPFIIATLSVLLLAAGYSYIVVEDGGSTKRR 136 N+LR WL+ V+ + + + + L++ ++ + V L ARTFG+WTLLS++I +CA++I + LY T+ +F +AL++F+ EV +YHT + M P ++A+ S+L + G Y+ VE+ K++ Sbjct: 6 NVLRSWLVMVSVIAAGNTLQSFRDHRFLSEKLYTASPGLVNGLQARTFGVWTLLSSVIRCLCAIDIRNRTLYYITLFTFFLALVHFLSEVFIYHTAALTIGVMAPLMVASFSILGMLIGLQYLEVEELSQNKKK 139 The following BLAST results are available for this feature:
BLAST of NO04G03210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03210 ID=NO04G03210|Name=NO04G03210|organism=Nannochloropsis oceanica|type=gene|length=500bpback to top protein sequence of NO04G03210.1 >NO04G03210.1-protein ID=NO04G03210.1-protein|Name=NO04G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=136bpback to top Synonyms
Publications
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