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Properties
| Property Name | Value |
|---|
| Description | Bromodomain transcription factor |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr4 | genome | chr4:842574..851596 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005669 | transcription factor TFIID complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Homology
BLAST of NO04G03090 vs. NCBI_GenBank
Match: EWM28818.1 (Bromodomain transcription factor [Nannochloropsis gaditana]) HSP 1 Score: 273.1 bits (697), Expect = 1.400e-69 Identity = 150/224 (66.96%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 110 TFALAVTRQAVAQAALAVGCKHTYPSVLDALTDMVRDFIIALGTEAQTKAESGGRTRVTLLDVLAALDEPQQETGRDRYELDWRALRGFAFRGDLTQLDQPEAFQWYQPFHTHIPPFPVCSGSSGSGIAPSDGLERALPVEGGGEVMCSSGAENGAGAAASGEEGRMWPPYVPSXXXXXXXXXTFRKTSLKASSKMEDPVAIQRHRIATKQLILKAIARQKTTS 334
TFALAVTRQAVAQAALAVGCK TYPSVLDALTD+VRD+I+A+G EAQ+KAE+GGRTR TLLDVLAAL+ PQQE RDRYE+DWRALRGFAF+GD +QLD+PEAFQWYQPFHTHIPPFPV S S +RALP++ +V + + G P +VPSXXXXXX TFRKT++KAS+K++DPVAIQRHRIATKQL+LK IARQ S
Sbjct: 49 TFALAVTRQAVAQAALAVGCKETYPSVLDALTDLVRDYIVAVGVEAQSKAEAGGRTRATLLDVLAALEVPQQENARDRYEMDWRALRGFAFQGDESQLDRPEAFQWYQPFHTHIPPFPVHSRIYVENCRRS--RKRALPLDRSSDVDSPGRETDEREEVSGGRSAYPRPAFVPSXXXXXXPEHTFRKTAVKASTKLDDPVAIQRHRIATKQLVLKTIARQNIAS 270
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03090 ID=NO04G03090|Name=NO04G03090|organism=Nannochloropsis oceanica|type=gene|length=9023bp
GCCTTGGCGAGTCTGTGCGGTGATCTCACATGAGACCTTGTTACTAGAGA
ATATTTTCTCTCTCTTCTCGCCCTCTCTTTTTTTTCCCACACTCTTTTCT
CCTATCTCTTCCTTTCATACTTCTCCATCCTTCTTCTCTTGCTTGTCGTT
GGTTATGGAAGGTGAAAGTGGGAGAAATCGGGTTTTGACTTATGAGGTAA
CTCGCTATACCACACGCCCTGGGTAATAGTCGCCCGATGAGCTCCACATT
TTACTTGTCCTCATCAACGCCGAGGCCCAAGGTTGATATCTTCCACAAGA
TCCTTCGACCATTAGCCTTCCCGAAACAGCCCGCTTAGATGCGCTGGAGC
TCTTAGCTCTCCTGCTCTGGGAGAGCATGACTCGCTTCAACATCATAAGA
CGCTGATAGAAGCCCTGCTTGCAAGCCTTCAGAGTGAAATTCGTTACGCA
TGGCGACCCTCCTCGGACGACAGCATTCAAAACAATCCAATTTACAGGGT
ACATCTCCCGTCCACCTTTTCGAGAGCTATCTAGCAATCAAACATATTCC
CATCGTTTCAGGGGAGTAATGAGGTTGGTCTGCTTGACCTGCTTCATGAC
AATCTCCTCCTCTACCATCCATGATGTTTCATGCGCCAGATATGTCAATG
TTCGTTAATGCACCAACAAATATTTGGCCCCAGTCCGATACTTCGATTTA
TCTATATATTCGTGAAAGACGCTATGGGACTCGCTTGCAGTGGTTTGCTG
TCACGGGAAGAGAGACTCCAGACTCACTTGAAATGCACCCTTCTTCTTGG
TGCATGATTTGAGAGTGCGTGCTTTTGTCACGGTATTGCATCGATTTTGT
GGAAAAGGCAAAACTAAAAATCAAAAACATATTTTGTCGTCTTATCACGA
GTGATTACGAGAAACATCATACACGGACTCGCTGAAGTCAAGAAGGCTCC
ATGCTCCCTGGCCCCACTATTAAACCAACACAGGGTACCCCTGGCCCCCC
GGCTTCTCTCATCCTCAGCACACTGCTCTCTGTGCCCTCGAGAAAGGCCA
TCGGTTTTGACACTTGTAACAGCGCCGGCCTGGGACCACCTTTTCAGgtg
tggcttgatagaagtagtaactgcgtttcgtcgaaaaaaagttggctgga
ctaacattatttcagTTACACTTCACAAAATCACATCACCCAGACTGTGC
GCTTGGCTTCTACACACACGCTGCCTCCCGTGCAACCATCATGGCACTTC
CCATTCCATCCGCCGTAACGGCCACCTCCACCTCATGCTCCCACCTACCA
CTGCAGCCACAAGCACAACGACAACGCCAACGCGGGGCTGCCGACACGTT
TGCGCTCGCCGTGACGCGACAAGCCGTGGCACAAGCAGCGCTGGCAGTGG
GGTGCAAGCACACTTACCCATCCGTCCTAGATGCCCTTACAGACATGGTC
CGGGACTTCATCATAGCGTTGGGCACGGAGGCGCAGACGAAGGCCGAGTC
CGGTGGCCGCACGCGCGTCACGTTACTGGACGTGCTGGCGGCATTGGATG
AGCCCCAGCAAGAGACAGGGCGGGACCGGTACGAACTTGATTGGCGGGCC
CTGCGGGGCTTTGCGTTTCGGGGAGATTTAACGCAACTGGACCAACCCGA
AGCCTTCCAATGGTATCAGCCATTCCATACACACATTCCGCCATTTCCCG
TTTGCAGCGGCAGCAGTGGATCGGGCATTGCTCCGAGTGATGGCCTTGAG
CGGGCGCTGCCCGTCGAAGGGGGTGGGGAGGTGATGTGTTCCAGCGGTGC
AGAAAATGGAGCAGGAGCAGCAGCAAGTGGGGAGGAAGGGAGAATGTGGC
CACCTTACGTGCCAAGCTTTTTGCCGGCCTTCCCGCCGCAACATACGTTC
CGCAAGACGTCCCTTAAGGCATCCTCTAAAATGGAGGATCCGGTCGCTAT
CCAGAGGCATCGTATTGCAACTAAGCAGCTCATCCTCAAGGCCATAGCCC
GGCAAAAAACGACGTCGGGCAAGAGTACGACTTGTAGCGGAATAGTGGAG
CGAGACGAAGCCAAGAAAACAGAGGTATTGGGTTCATTGTCGTCCTCAGT
ATCCTCATCACACGCGGTACCGAAACGTGCCACTTGCGACCGTCCACTAC
CCAATAAGGACGAGGAAGCCGATGAGGACCTTCTTTTCTCTTCAGACGCA
CAGGATAGTCGACCTGTGGCAACTGCCTTGGAAGTCTTTACGGCTGAGTC
AAAGTAAAGATAGAGCATCCGTTGAAATTGCAAAGGCCAAAGCAGGTTGA
ATGTACATAATTTACTCTTAGTCGGTTTTCACTATGTTACGTTATGTTAT
GCTATAAATACTTCACAAGTTGCTAACTCTAAAAACAGCCAACCGTTCCG
CCTCCAACACCAACATGTCTCCGCTCACCACGTCCCAGGATACATCCAGG
ACCGCGCCTGCTTGCTCTTCAGGAAAGACGGAGCCCCGAGCCTCTATTCG
ATGCGTAGCAGAGCAGCAGGTATAGAGGAGTCCGCCCGCCGAGAACAAAA
GCACGATGATGTCAGTGCGGCCCGGTGGAAAAAGCACCCAGGCACGCCAC
GAGTCAGACAAGGAAGCGGGCGCCGACGGCAGTGGCAAACGGGCCAGCCT
GACCAAGCGGGGATTACACATTCCCTGCTCGTTTCCTTTTCCTTCCTCAA
CGCATAAATCCACGGTGAGCTCCGGGCAGCGACGGAGCATGACAAAGTAC
GTTTGGCTCCTTCTATTCCCTTGATCGACTCCCCCGTCGCACTTTCCCAC
ATTGGCACTGATCAATTCTGTGCCAGACTCAACGATGACTTTGCCGCTCC
TGATGTCATGAAATTGAACGGCCAATCGCGCTCCGTCACCATCCACGGTA
GTCAGTACACCCCACTCCCCGCCCGCCGCGTGGTGGTAGTCGCGAACGTT
GGCGTTGGGACCCAGAAGGGTGAGATCACGCCTGTCAAATGTCTTGGTCG
GGACACCGGAGGGCCCACTTTTTACGCCCACAGTCCAAAGAAAGACAGCT
CGGGGCGTCACCAAAGCGATCACACCCCGGGAAATCCAGCGCCAGAAGAG
TACCCGCGTCTGCACAGGTTGTCGAGCCACGCCCCTCCGCTGCATCAAGT
CGTAAACTTGTAGCACACCTGCCTGTGGCTGCTTTATTCTCCCTCCAGTC
GTCGTTGTAGTTGTCTTTGCGACCGTATAGCAAGCAATCACAGGAGAGGA
AAGCAAAAATGGCAGGGACGACGAGGAAGAGGACGACGACAAGCCTCCCA
CCAAGATAGCGCTCTTGGCCTGAAAAGGATAGCGGTCGCGGCGAGCTAAT
TGATCCGCTGACGTGGTCACTGCGAGCACCACAATAGCGACTTTAGGGAT
CCCACTTTCCAAATTCGTAAACCTCGTCATTTCCCGCAAACACAAATACT
GTCCGCACTGGGAGAAATAGCCGGCAATCTCATCCCGAAGGACGTTGGCT
GGATTGACGTCCAGCTCTGAAGGTAGAAGCAGCAAGAGATGCTTCAGCTC
AGGCGGGGTTGACACCATTTGAAGCCCCAGGGTTGGAGGCGCATGCTCGG
CGGCAGCAAGAGGTGCGGTAGTGGTAACTACGAAGGAAGTGGGTCTAGAG
ACCGGATCCTCCTTAAAACCTGCCCAGCCTGTGTCGATATCCACCGAGGG
ATGGGTTGGTGGAGGTGAGGACTGTATGACAAGTCCATCCGCAGATCTAG
CCAGTGAATTCGCCCGGCTTTGCCATCGCCGAACAGCCGTATCGTTGGCA
GTGGGGGCTGGAAGGGAGGCTATAAGGCTACATGCCCCTTCTCCACTAAG
ACCACGTAGTCCATCTAGAAGCGTTATGGAGGAAGTATCCTCACGCCCAG
CTCCTCTCCGTCGCACCGGAAACATCACGCCATCAGCCATATTGGGTAAG
GGGGCAAAATTTTCGCGTTTCCGTGCTGCTTTTACCGGTAATGGTGGTGG
TGATGTCGGAGCTGCCTCTTGTATGTCGCTGCCCTCGTTTCTGATGCTTC
GACCGCCATCACTTTTGATCCTAAAGGCCAGCTTCTTCCTCTTCTCCGCT
AGTTGAAGGTAGCTCTCCCGATAGTCATAAAGATCGTCCGCGCTGCGAGC
GCAGGCCCACAGCCTAAGTTCGGTCATCCGGTGGCCACGGAGGTTGGGAC
CCACCTCAAGGACCGTGCGGCGAAGCTGGCTCTCGCTCAGAAAGGGAAAT
TTGATCAGCGACTGAGTCGAGATAGCCTTCTTGCCCCCCACGAAAAAGGC
TACTGTTGCTTGTTTGCCCCCTGAGCTTTTCATCTCGAGCGTAAAGGCAA
CGTGTGTCCAAATTCCTTCCATTACGGTACCCGGCACCGTGCTCAGTGGC
GCCTGTTTCCCTTCGGTCCAAAAGATCAACGCACCTTCTGCGGATATGCC
TAGACCCCACAGATACATGGACTGCTCATCTATAGTTTTGCGAGTGATCA
AGACTTCGGGCTGCGACGAACAGTAAGAGGAGGAGGACGACGACCGCTGA
ATCCAAAGTTCCACCGTGAGGCGACACCTGCCGGGTTGCTCCTGTGGTCC
GTGGTAAGGTCCCACATCTAAGGCAGAACCCCGGGCCACGACGGCTCTCA
AGCCACGGGGTAACAAAGAGGATGATAAGCTTCCATATGGTATGTTTGAT
GTTCCCCAGAAGGCGTCCATACCCATGCGCACTTTGACATCGTCCCCCTG
GTCAATCGGACAAGTCGACTTCACGAAGGATAGCGACTCGGATTGCCCAT
TGGCCAGGTCCAAGGAATGACCGTACTGTGACAAGTCACCAGCCATACGG
AGAGGAACTTCTACGGCCATAGAAGAATCTGCCAAAAAAGTAGGCTCGTT
AAATCGCAAATACAAGACTACATTGTCCTCCTCCCGTCCCTCCCCTACGC
CCTTGACCCATTCCTCTTCCCTCTTAGTTGCATCTCGTTCACGTTCGTCC
AACCTAGATATTTCTTCTCTCAACCCCTCGGGTGCCACTCGTCCCAGCCA
TTCTTCCACACGATCAAGCAGCAGGGCTTGTACTAGAGGTGCACGCGGTG
GACCGCCTCGACTGACGGAGGAGGAGGAAGAAGACGGCGTTGCCGGGAAG
GCGACAAAAGCAGTGGTAGAAGGCGCAAGGCCGGCTTGCGGCCATTGCGG
GAGCTGTAAAATAGCGCCTGATAGACGAGGAAGCAAATATTGACGCCGCT
GATAGTCAAAGGGAAACGTCTGTAAGCTCAATCTTGCACATACTAAACTA
GCCACCGCAGCCTTCCTTTTCTTTTCCGGTCCAACTTCCTTCGTCATAAA
CGCTTCCCCTTCCCGAAGACACGCCAGCAAATGTGGCTCTGCTTTACAGA
GATCGCGAAGAAGCTGTGCACAGCCATCTGACACAGGGCCTCCACCCAAG
AGGTGCAGTATCAGTAGATTCATGGCGTTTTCATCTTCGCCTGCCAAGTC
GAAAAGCCGGAAAGCCTCCTCTGTCTGCCCCGCCTGCCATGCGCGTTGCC
CCAACAGCGCCAACACCCGACTGCGATGGCGGAAGCGTGGGGGCAATGTG
ATGTCCGAGTGAAGCGCGACATCTTGTCCCTTCACGATGTTGTCCCCCAT
TGCCTCGCACATTGCATCCTGCCATTGCGAATTTTGCGCCGCCAACCCAG
CCTTGACTTCTGGCGGAATCCAGGGCCGCGGTTGGAAGGCCTTCGGACCC
TCCGACTGCCCAGCAAGGAGCGCTGTTTTGGACTCTCGTCCCTTCCCAAG
TTGAACAGTCCCTGCAACACCGGCAAGTGCTGCCGCCCATCCACCAAAGC
CTGCGCGAGACAACGCCGCACACGCCCATGCGGTGGCGCCTGCATCTACA
CTTGGCCCTTCTCCAAGTGCATACCGTGCTCCACGCTGCTTTGCCAGAGG
GCCGTACAACTCCAGAAGTGTTTTCAAAGCTACCGTGAGAAATGGTGAGG
AAGTTACTGCTTCTACTGCCGATGGTGGCGGTGGGGAGGGAGAGTACAGT
GCGGATGGTGCAAAGGAGATAACAGGTAATTTGACAAGGCGAGGCCAAGC
CAGGAATCCCACCAGCAGGGGTTCGAGAGGCAGTAATGCCCGCGTGAAGA
TGCGCAAAGAGCCAGATGCGCCATTGTTTGCCGCATACACCAAGCGATCA
GGCAAAGCTGCAACAAGTATCACGTCTGCCCCAGCCTGTTCTTGGTCCAG
CGATAAGACCGGCCGCAGCTCGGTGGCGCCAGAATCAAGAGATAGGTACA
AGACACGACCATCTGCAAAGACAATCAGCGGGGTCGGACCCAACCATGCC
AATCCGCACGGCGCCATCGTCAATTCCACGCCGGCCAATAAAGTCAAGTC
TGGAGAGAAGAGTAACAGACGTTGAGACGTCAAAACAGCTATCACAGAGC
CAGCCTCTATGCCCTGCCCATTACTCGTCTGGTTGATGGCTTCCATTATG
ACCTCTTGCGCACGGAGGACAGCCGACCCGACGAAGCTTGGCGGAAACCC
TCCACCTATCCGAGAGCAAGTCAAGATGGTACTTCCATTCCCCCCCGCCT
GTCTCTGCTGCCTGACACACAAGACCCTAAGTGACCCTTCCCCTTCATAT
GGAAATCCGCTCCCACCAGCTCTAAATAGCCGCGTAGGAATGTATTCTTG
TGCTCCATCCTCTGTTTGCACGTCGCCATCTTCGACAGTTTGTGACATAA
CCCATGCAGTGGTGGCTGCGGAGGGATCTCCATTCGCCTGAAGGAGGGTC
GTCTTGACAACAGCACCGCATTTGCCAGTATAAGATTGTAGAAGTGCGAG
GATCCGTGGCGACAAGAAGGCTGCATCTATTGTCACGCCTGCGTGCACAA
AGTCGAGGCTGACTAGAGCCACTTGATTGCCGTTGTTTGTTTCTACCGAT
CCCCCATCCTGCGCCGTACTGCTTTGACGCACAACCACATAAGCCAGCGG
GGCGCAAGCATCGACTACATTGTCGCTTCCAGCCACCTTGGGTCTCAGTA
TCCTGAGCAGAACCACAATCAGTGATCCGTCCGGGCTGACGATGAGGCGA
TGGGGCAGCAGTAATATCTGGTCGTTGTCTTCGTTCAGCCCGGAAAAAAT
CGGCACTGAATGCGACAAGCTCAGCCTGTCCAAAAGAACGGAAAAATCTT
TCCCATACGTCGGAAGTAGAAGCACGGCTTCCGCTTGGATGTCCTTGTCT
CGATCGCTTGAGCGTTTGTTTTGGAGGTGGTGCAGTGGTCGAGCAACCAC
CAGGGCCTTGAGCGTCAATGACCCGCAAACTGAGGACAGCCCGCTTTTCC
TACTAGCTGAGAAGCTATTCGTGTCGTCCTGGTGGAGAGATAAAAGCATA
CGTGACTGTATTGAGTAGATGAAAGGAGCATGTGTAGGCGATGATGGCGA
AGAAGACGGCTGTGAACATCCCCACGAGTCCGCTAAAAACGCCCCACAGT
CAAGCTGAGGTGGCCCTATCGCAGCCAACTGTGACGGCAAGGGAAACGCA
GGACAAGCCAACACATCAGCAAGTTTGCTCACGAGCAGCTTGTTCACTTT
ATTGCCCTCTCCCGACAAGATGATACAAGAGTTGCGGCTTTGAAAAGCTA
AATGCCGAGTCCGCACGGGCGGCCCCATGTGCACGACGACCAGAGACTTA
GGCAGGAACGCCAGCAACGCCACGCGTGTCACGTCACTGTCACCATTGGC
TGCCCGCACGCTGACCAAAATTAACGGCTTGCTACACTTGAGAAGTTCTA
TGCGCTCGATAGGGCTAGGCATGGCCATGACTTCGCAGCTCTGTAGGGGT
AACACAGCACCAGACAAGTTCAGCGCATCGTCACTACCATTCTCTCCCTG
CGCAGTCTCTCGAAGGAGCGTGTTGGTTGACCAGACCGCGACCTCTCCGC
GCGTGCTACCGGCCAAAATTATTCCGAATTCAGAGGTCATACAGATGCAC
GAGAGAGCACCTTGCATGTGAATCCCAAATTTGAGAGCCGCCACAGGCAG
GAGCAGGTTTCGGACTGATCTGCCCAAGAGCACTGACATAGCTGCCTTCC
CTGTCGTTGCTATGCCACTCGCTTGCTCCTGGCCGTCGTCATTGTCGTTG
TTATCATCTCCAAAATCTCTGTTCTCCTGCTTGCTACTGCCGTCCGGGAC
ATAGCTTCGCGCGGTAGCACTAATTACGTTATCTTCGACTCCGGCCCTGC
CTTTCTCCGCGGCCACTCCGCCAACGTCATAAAGGTGCAGCACCCCGTCT
TGGAAGCCCACGCAGAGCAGAGGTTGGGACTCATGGCACGTTAAGGCAAC
TACAGCGACCTTTTTCCGCGATGCATCCATAGCTGTGAGCCGTTGTGTGC
CAACGGTCGGAGGACCAGTTGAGGGGTGAATTCTGACGACATGCAGACGT
GAAAGCTCGCTGCTGCCACCGGACTTGCCCCCAATCCCCCGCGTCACAAA
AAAAAACAAACCTGAAGGTAGACCTCTCGAGCCCGCGAAGAGACAGTCCG
ATAGGGCGTCCGAATTGCTATTACTGGCATTCTTGTCACCTTCGCCACTG
CTGCTGGTACTGCTGCCGCTGCTGTTCACTTCCCCGCTGGCCGCTGCGGG
CAAGTGCACCACTTCCCGCAGGGTGTACAACCCGCCCTCCGGTGCCGCTA
TATCCCAGATTTCTAAAACGCCCGACTCTAAAAGTGCTCCAAGTAAGCTA
TGCCCTGCGTTGGTTGTGCTCACTGCCACTTGAGCCACGGGACCCCCACA
GACCACCTCGCCGGCCCAACTGCTACAGCTGCTGCTACCACCGCAAGTTC
CACCACAGGCGACTTCGCGAATCACTTGGGGTGCAACACTCTTGTCCACT
ACGAAGACAGTTGTGCGGTCTGGCCGCGACGTTGCGATTAGCGGCTGTCC
TCTTTTCTTCTTTGGCGTCGTCATCGTGGGGCCGGTCACTATACTGCACT
GGTGTAGCTACTCGGCCATGACT back to topprotein sequence of NO04G03090.1 >NO04G03090.1-protein ID=NO04G03090.1-protein|Name=NO04G03090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=413bp
MLPGPTIKPTQGTPGPPASLILSTLLSVPSRKAIGFDTCNSAGLGPPFQL
HFTKSHHPDCALGFYTHAASRATIMALPIPSAVTATSTSCSHLPLQPQAQ
RQRQRGAADTFALAVTRQAVAQAALAVGCKHTYPSVLDALTDMVRDFIIA
LGTEAQTKAESGGRTRVTLLDVLAALDEPQQETGRDRYELDWRALRGFAF
RGDLTQLDQPEAFQWYQPFHTHIPPFPVCSGSSGSGIAPSDGLERALPVE
GGGEVMCSSGAENGAGAAASGEEGRMWPPYVPSFLPAFPPQHTFRKTSLK
ASSKMEDPVAIQRHRIATKQLILKAIARQKTTSGKSTTCSGIVERDEAKK
TEVLGSLSSSVSSSHAVPKRATCDRPLPNKDEEADEDLLFSSDAQDSRPV
ATALEVFTAESK* back to top
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