NO04G03040, NO04G03040 (gene) Nannochloropsis oceanica

Overview
NameNO04G03040
Unique NameNO04G03040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1784
Alignment locationchr4:815982..817765 +

Link to JBrowse

Properties
Property NameValue
DescriptionGpn-loop gtpase 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:815982..817765 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030228Gpn3
IPR004130Gpn
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Homology
BLAST of NO04G03040 vs. NCBI_GenBank
Match: ORX43122.1 (hypothetical protein BCR36DRAFT_586802 [Piromyces finnis])

HSP 1 Score: 266.2 bits (679), Expect = 1.200e-67
Identity = 138/283 (48.76%), Postives = 193/283 (68.20%), Query Frame = 0
Query:    1 MPRCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKE-----ELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGEGD 279
            M + CQLV+GPAG GKSTYC+ +  H        + +R+VH++NLDPAAE  F Y  P +D+R+LIT+DDVME +D GPNG LVYCME+L+ N+ WLEE L  + EDDYL+FDCPGQ+ELY+H P+MK +V+ L K    + VC +YL+D+ F+ D SKF +G L  +S MI LEIP +NV++K DL+ K+     + E+ LE+DS+ +   + +  M  R Q L   I  ++D+Y +V FLPLD ++E+S   +LAQ D ++QYGEDLE +E  D+ E   D
Sbjct:    1 MGKQCQLVIGPAGSGKSTYCRTIMSHCQ------SIKRSVHLVNLDPAAEN-FEYE-PTIDIRDLITLDDVMEELDYGPNGGLVYCMEFLINNINWLEEELNNY-EDDYLIFDCPGQIELYTHFPIMKTIVQTLQK--YDYNVCCVYLLDSQFIEDTSKFFSGVLNAMSAMIQLEIPHINVLTKVDLLDKKVQRSRDFERYLEVDSSLLTEDINN-RMRPRYQHLNEAIVQLIDEYNMVNFLPLDISDEESVAYVLAQVDNSIQYGEDLEVKEREDFTEDVDD 271          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_019620257.1 (PREDICTED: GPN-loop GTPase 3-like [Branchiostoma belcheri] >XP_019620266.1 PREDICTED: GPN-loop GTPase 3-like [Branchiostoma belcheri] >XP_019620273.1 PREDICTED: GPN-loop GTPase 3-like [Branchiostoma belcheri] >XP_019620281.1 PREDICTED: GPN-loop GTPase 3-like [Branchiostoma belcheri] >XP_019620284.1 PREDICTED: GPN-loop GTPase 3-like [Branchiostoma belcheri])

HSP 1 Score: 265.4 bits (677), Expect = 2.100e-67
Identity = 145/282 (51.42%), Postives = 193/282 (68.44%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVME--MMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVG---KEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGEGDA 280
            R  QLVMGPAG GKSTYC  + +H        A RR+V V+NLDPAAE  F Y     D+RELI+VDDVME   +  GPNG LV+CMEY ++N +WLEE LG   EDDY +FDCPGQ+ELY+HIPVM+ LV+ L      F VCG++LID+ FM+DPSKF++GAL  LS M+ LE+P +NV++K DL+    K+E+E+ L+ D   ++A         + Q LT+ + SVVDD++LV FLPL+ ++EDS D +L   D ++QYGEDLEPRE  +  + + DA
Sbjct:    2 RYAQLVMGPAGSGKSTYCSTIVKHCE------ALRRSVRVVNLDPAAE-YFDYPV-MADIRELISVDDVMEDDSLRFGPNGGLVFCMEYFIQNFDWLEEELG-EGEDDYFLFDCPGQIELYTHIPVMRKLVDTLQH--WDFRVCGVFLIDSQFMVDPSKFLSGALSALSAMVTLEVPHINVMTKMDLLSKKTKKEIERYLDPDIRGILADGREGYFDKKFQKLTKALGSVVDDFSLVQFLPLNRSDEDSIDVVLNTIDCSIQYGEDLEPREAPELPDDDDDA 272          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: ORY27019.1 (hypothetical protein LY90DRAFT_705959 [Neocallimastix californiae])

HSP 1 Score: 265.4 bits (677), Expect = 2.100e-67
Identity = 137/279 (49.10%), Postives = 192/279 (68.82%), Query Frame = 0
Query:    1 MPRCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKE-----ELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVE 275
            M + CQLV+GPAG GKSTYC+ +  H        + +R+VH++NLDPAAE  F Y  P +D+R+LIT+DDVME +D GPNG LVYCME+L+ N+ WLEE L  + EDDYL+FDCPGQ+ELY+H P+MK +V+ L K    + VC +YL+D+ F+ D SKF +G L  +S MI LEIP +NV++K DL+ K+     E E+ LE+DS+ +   + +  M  R Q L   I  ++D+Y +V F+PLD ++E+S   +LAQ D ++QYGEDLE +E  D+ E
Sbjct:    1 MGKQCQLVIGPAGSGKSTYCRTIMSHCQ------SIKRSVHLVNLDPAAEN-FEYE-PTIDIRDLITLDDVMEELDYGPNGGLVYCMEFLINNINWLEEELNSY-EDDYLIFDCPGQIELYTHFPIMKTIVQTLQK--YDYNVCCVYLLDSQFIEDTSKFFSGVLNAMSAMIQLEIPHINVLTKVDLLDKKLQRSREFERYLEVDSSLLTEDI-NTRMRPRYQHLNEAIVQLIDEYNMVNFVPLDISDEESVAYVLAQVDNSIQYGEDLEVKEREDFNE 267          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_017931864.1 (PREDICTED: GPN-loop GTPase 3 [Manacus vitellinus])

HSP 1 Score: 264.2 bits (674), Expect = 4.700e-67
Identity = 140/279 (50.18%), Postives = 189/279 (67.74%), Query Frame = 0
Query:    1 MPRCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVM--EMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLV---GKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVE 275
            MPR  QLVMGPAG GKSTYC  + +H        A  RAV V+NLDPAAE  F+Y     D+RELI VDDVM  E +  GPNG LV+CMEY   N  WLEE LG   EDDY++FDCPGQ+ELY+H+PVMK LVE L +    F VCG++L+D+ FM++  KF++G L  LS MI+LEIPQ+N+++K DL+    K+E+E+ L+ D  +M+    ++    R + LT+ I  ++DDY +V FLP D ++E+S + +L   D  +QYGEDLE +EP++Y E
Sbjct:    1 MPRYAQLVMGPAGSGKSTYCSTMVQHCE------ALGRAVQVVNLDPAAE-HFSYPV-MADIRELIEVDDVMEDESLRFGPNGGLVFCMEYFANNFNWLEESLG-HVEDDYILFDCPGQIELYTHLPVMKQLVEQLQQWE--FRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQINIMTKMDLLSKKAKKEIEKYLDPDMYSMIEDSTNILKSKRFKKLTKSICGLIDDYGMVRFLPFDRSDEESINIVLQHIDFTIQYGEDLEFKEPKEYEE 268          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: PVD31226.1 (hypothetical protein C0Q70_06638 [Pomacea canaliculata])

HSP 1 Score: 264.2 bits (674), Expect = 4.700e-67
Identity = 151/297 (50.84%), Postives = 200/297 (67.34%), Query Frame = 0
Query:    1 MPRCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDL--GPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEE---LEQILEMDSAAMVA------RMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGEGDAEGEEESG 287
            MPR  QLVMGPAG GKSTYC  + +H          +R+V V+NLDPAAE  F Y     D+RELI +DD ME  DL  GPNG LV+CMEYL++NL+WL E+L    EDDY++FD PGQ+ELY+HIPVM+ LV+ L      F VCG++L+DA F+++PSKFV+G L  LS M+++EIP VNV+SK DL+ K++   LE+ LE D  +++       + GH     R + L   +AS++DDY+LV FLPLDPN+EDS +  L Q D A+QYGEDLEPRE R+      D   +++SG
Sbjct:    1 MPRYAQLVMGPAGCGKSTYCSNIVKHCE------VLKRSVQVVNLDPAAE-HFDYPV-YADIRELIQIDDAMEDEDLHFGPNGGLVFCMEYLMQNLDWLHEQLD-DVEDDYILFDLPGQIELYTHIPVMRQLVDSLQN--WNFRVCGVFLLDAQFLIEPSKFVSGILTALSAMVSMEIPHVNVMSKLDLLSKKDRKGLERYLEPDVKSLLTEEFDDKKFGH-----RFKALNTAMASMIDDYSLVTFLPLDPNDEDSINNALIQIDNAIQYGEDLEPREYRE----ADDISADDDSG 277          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: CCA21276.1 (GPNloop GTPase putative [Albugo laibachii Nc14] >CCA21650.1 GPNloop GTPase putative [Albugo laibachii Nc14])

HSP 1 Score: 263.8 bits (673), Expect = 6.200e-67
Identity = 136/273 (49.82%), Postives = 187/273 (68.50%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELE----QILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRD 272
            RCCQLVMGPAG GKSTYC  +QE         A  R  +V+NLDPAAE  F Y     D+R+LI+V+DVME +  GPNG LVYCMEYL++NL+WLE  L  +++DDY +FDCPGQ+ELYSH+PVMKNL E L     GFA+CG+YLID+ F+ D +KF++G L  LS M+ LE+P +NV++K DLV ++ELE    + L+  S  ++  +       + + L   I +V++DY++V F+P++  +EDS   +L   D A+ YGEDLEPR+P+D
Sbjct:    2 RCCQLVMGPAGTGKSTYCNNIQEFC------AASGRMTYVVNLDPAAE-QFEYPV-AFDIRDLISVEDVMEELGYGPNGGLVYCMEYLIQNLDWLENLLTEYSDDDYFIFDCPGQIELYSHLPVMKNLCEAL--QCWGFAICGVYLIDSLFIADANKFISGVLCSLSAMVQLELPHINVLTKCDLVDEKELEKYKNKYLDPSSDRLIETLVS-NTGAKWRSLNTAICNVINDYSMVAFVPMNITKEDSIANVLMHVDHAINYGEDLEPRDPKD 263          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_017669702.1 (PREDICTED: GPN-loop GTPase 3 [Lepidothrix coronata])

HSP 1 Score: 263.8 bits (673), Expect = 6.200e-67
Identity = 140/279 (50.18%), Postives = 189/279 (67.74%), Query Frame = 0
Query:    1 MPRCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVM--EMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLV---GKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVE 275
            MPR  QLVMGPAG GKSTYC  + +H        A  RAV V+NLDPAAE  F+Y     D+RELI VDDVM  E +  GPNG LV+CMEY   N  WLEE LG   EDDY++FDCPGQ+ELY+H+PVMK LVE L +    F VCG++L+D+ FM++  KF++G L  LS MI+LEIPQ+N+++K DL+    K+E+E+ L+ D  +M+    ++    R + LT+ I  ++DDY +V FLP D ++E+S + +L   D  +QYGEDLE +EP++Y E
Sbjct:    1 MPRYAQLVMGPAGSGKSTYCSTMVQHCE------ALGRAVQVVNLDPAAE-LFSYPV-MADIRELIEVDDVMEDESLRFGPNGGLVFCMEYFANNFNWLEESLG-HVEDDYILFDCPGQIELYTHLPVMKQLVEQLQQWE--FRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQINIMTKMDLLSKKAKKEIEKYLDPDMYSMIEDSTNILKSKRFKKLTKSICGLIDDYGMVRFLPFDRSDEESINIVLQHIDFTIQYGEDLEFKEPKEYEE 268          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_002595970.1 (hypothetical protein BRAFLDRAFT_96743 [Branchiostoma floridae] >EEN51982.1 hypothetical protein BRAFLDRAFT_96743 [Branchiostoma floridae])

HSP 1 Score: 263.5 bits (672), Expect = 8.000e-67
Identity = 143/271 (52.77%), Postives = 187/271 (69.00%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVME--MMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLV---GKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPRE 269
            R  QLVMGPAG GKSTYC  + +H        A RR+V V+NLDPAAE  F Y     D+RELI+VDDVME   +  GPNG LV+CMEY ++N +WLEE LG   EDDY +FDCPGQ+ELY+HIPVM+ LV+ L      F VC ++LID+ FM+DPSKF++GAL  LS M+ LE+P +NV++K DL+    K+E+E+ L+ D   ++A         + Q LT+ + +VVDD++LV FLPLD ++EDS D +L   D A+QYGEDLEPRE
Sbjct:    2 RYAQLVMGPAGSGKSTYCSTIVKHCE------ALRRSVRVVNLDPAAE-YFDYPV-MADIRELISVDDVMEDDSLRFGPNGGLVFCMEYFIQNFDWLEEELG-EGEDDYFLFDCPGQIELYTHIPVMRQLVDTLQH--WNFRVCAVFLIDSQFMVDPSKFLSGALSALSAMVTLEVPHINVMTKMDLLSKKAKKEIERYLDPDIRGILADGREGYFDQKFQKLTKALGTVVDDFSLVQFLPLDRSDEDSIDIVLNTIDSAIQYGEDLEPRE 261          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: GAX97266.1 (GPN-loop GTPase, putative, partial [Pythium insidiosum])

HSP 1 Score: 263.5 bits (672), Expect = 8.000e-67
Identity = 129/265 (48.68%), Postives = 186/265 (70.19%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPR 268
            RCCQLVMGPAG GKSTYC  + E         A  RA +V+NLDPAA+  F Y     D+R+LI+V+DVME +  GPNG LVYCMEYL++NL+WL++ L  +++DDY +FDCPGQ+ELYSH+PVMK L + L     GFA+CG+YLID+ F+ DP+KF++G L  LS M+ LE+P  NV++K DLV ++EL + L+  S  ++  + + +   + +PL+  I +V++D+++V F+P++   E+S + +L   D A+ YGEDLEPR
Sbjct:    2 RCCQLVMGPAGTGKSTYCNNMHEFC------AASGRATYVVNLDPAAD-HFEYPV-AFDIRDLISVEDVMEELGYGPNGGLVYCMEYLVQNLDWLQDLLTEYSDDDYFIFDCPGQIELYSHLPVMKQLCDAL--KDWGFAICGVYLIDSLFISDPTKFISGVLCSLSAMVQLELPHXNVLTKCDLVDEKELSKYLDPSSGYLLENLAN-STDPKWRPLSSAICNVINDFSMVAFVPMNITREESIETVLLHVDHAINYGEDLEPR 255          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_008909991.1 (hypothetical protein PPTG_14437 [Phytophthora parasitica INRA-310] >XP_008909992.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI40164.1 hypothetical protein F443_14369 [Phytophthora parasitica P1569] >ETI40165.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK80276.1 hypothetical protein L915_14007 [Phytophthora parasitica] >ETK80277.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL33693.1 hypothetical protein L916_13909 [Phytophthora parasitica] >ETL33694.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL86981.1 hypothetical protein L917_13700 [Phytophthora parasitica] >ETL86982.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM40141.1 hypothetical protein L914_13831 [Phytophthora parasitica] >ETM40142.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN04597.1 hypothetical protein PPTG_14437 [Phytophthora parasitica INRA-310] >ETN04598.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO68893.1 hypothetical protein F444_14372 [Phytophthora parasitica P1976] >ETO68894.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP10005.1 hypothetical protein F441_14249 [Phytophthora parasitica CJ01A1] >ETP10006.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP38126.1 hypothetical protein F442_14213 [Phytophthora parasitica P10297] >ETP38127.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 263.1 bits (671), Expect = 1.100e-66
Identity = 127/274 (46.35%), Postives = 190/274 (69.34%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGE 277
            RCCQ+VMGPAG GKSTYC  + E         A  R  +V+NLDPAA+  F Y     D+R LI+V+DVME +  GPNG L+YCMEYL++NL+WL++ LG ++++DY +FDCPGQ+ELYSH+PVMK L + L     GF +C +YLID+ F++DP+KF++G L  LS M+ LE+P +NV++K DLV ++EL + L+     ++  + + A   + +PL+  I +V++D+++V F+P++ N E+S + +L   D A+ YGEDLEP+EP+ +   E
Sbjct:    2 RCCQMVMGPAGTGKSTYCNNMHEFC------AASGRMTYVVNLDPAAD-HFDYPV-AFDIRNLISVEDVMEELGYGPNGGLIYCMEYLVQNLDWLQDLLGEYSDEDYFIFDCPGQIELYSHLPVMKQLCDSL--KDWGFNICCVYLIDSLFIVDPTKFISGVLCSLSAMVQLELPHINVLTKCDLVDEKELSKYLDPSEGYLLENLAN-ATDPKWRPLSAAICNVINDFSMVAFVPMNINREESIETVLMHVDHAINYGEDLEPQEPKSHEADE 264          
The following BLAST results are available for this feature:
BLAST of NO04G03040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ORX43122.11.200e-6748.76hypothetical protein BCR36DRAFT_586802 [Piromyces ... [more]
XP_019620257.12.100e-6751.42PREDICTED: GPN-loop GTPase 3-like [Branchiostoma b... [more]
ORY27019.12.100e-6749.10hypothetical protein LY90DRAFT_705959 [Neocallimas... [more]
XP_017931864.14.700e-6750.18PREDICTED: GPN-loop GTPase 3 [Manacus vitellinus][more]
PVD31226.14.700e-6750.84hypothetical protein C0Q70_06638 [Pomacea canalicu... [more]
CCA21276.16.200e-6749.82GPNloop GTPase putative [Albugo laibachii Nc14] >C... [more]
XP_017669702.16.200e-6750.18PREDICTED: GPN-loop GTPase 3 [Lepidothrix coronata... [more]
XP_002595970.18.000e-6752.77hypothetical protein BRAFLDRAFT_96743 [Branchiosto... [more]
GAX97266.18.000e-6748.68GPN-loop GTPase, putative, partial [Pythium insidi... [more]
XP_008909991.11.100e-6646.35hypothetical protein PPTG_14437 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009511NSK009511Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03040.1NO04G03040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578954gene_2075Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g25gene1904Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03040.1NO04G03040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03040 ID=NO04G03040|Name=NO04G03040|organism=Nannochloropsis oceanica|type=gene|length=1784bp
GGGCGATAGAACCTCTGTCTTTGATGTAAAGGGAATAGAGATTAACACAT
GTGTTTGGGTGAAGATACGTCGTGAGATCGCAAGCGAGAAAAAAAAAGAA
ATATGCACCAACCGGGAATCGCACAGGCTTACGACAATCTGAGCACAACC
AAATCGCTCGATTGGTGACGGAAATCATATCGCAAGGAACCCGGGCCTAA
ACCTTGGGAAGGTTCAATCCTACCACTAGACTATTGGTGCAGTTGATCAA
CGTTCGGGGTGACCAATACTATCTATATTTTCTACCCCAAGTGCAAATCC
TCTTTTTTATGCCTTTAAGTTGCCATGTTATCCCTCACCACAATACATAC
GACTCAAGAGAACCACCCAATTTTAGTAACAAAGGAAAGTATACAGTATA
CAGGTAGGGTTAACATTTTTGGTGGCAATTGTGATTTCTTATATTTGCGA
AAGGGTTGTATCGACATCGAGACTCTTTCGTGGACAATTTTTCAAGAAGA
GGTCAGTTTCTGGCTCCTTCTCTGCCCGCATGATCATGCCTTGATCTTCT
ATCACACGGGCAACACTGGTACCTGTACATTTGCGGGCTTTTTTTGCCGT
CGATTTGTGTCGTCTAGCTGCCCTACTATCCGAGATTCCCCAGCCTTCTC
AGGGGACACTATCTAACGCCCTATCAAAACCCCAAAAAATAATGGCAGGG
CGTACCATGGTGCTGCTACCCTCACATAGCCTTATAAGCGTGTTCACGAT
CAAGAACGGTGTGTTATCCCATTTACTGTGATAGGTTTTCCGTCAAATAG
GATTTTTTAGTCTCCTGCTCCCGCTTGCAGGCAACATCCACCATGCCTCG
ATGTTGCCAACTCGTCATGGGGCCCGCCGGTGTAGGCAAGTCCACATACT
GCAAGCTTTTACAAGAACATAGCACTGCCCAGCAGGGACCTGGGGCTCAG
CGTCGCGCCGTGCACGTCATTAATCTTGACCCGGCGGCCGAGGGGCCCTT
CGCCTACTCGACACCAGAAGTAGACGTACGGGAGCTCATTACTGTAGACG
ACGTCATGGAAATGATGGATTTGGGGCCAAACGGTGCATTAGTGTATTGC
ATGGAATACTTGTTGGAAAATTTGGAATGGCTGGAGGAGCGGCTGGGGTT
GTTTGCGGAGGATGATTATTTGGTCTTTGATTGCCCGGGCCAGGTTGAGC
TGTATTCGCACATTCCTGTTATGAAAAATCTGGTGGAATTTCTCGTCAAA
GGCCCGCTGGGCTTTGCTGTGTGTGGGATTTATTTGATCGATGCGCATTT
TATGATGGACCCGAGTAAATTTGTGGCGGGTGCGCTGCTTTGTCTCTCGA
CCATGATTGCTCTAGAGATACCTCAAGTGAATGTTATTTCCAAGGCAGAC
CTTGTTGGTAAGGAGGAGCTGGAACAAATACTGGAGATGGATTCTGCGGC
TATGGTGGCACGGATGGGTCATTTGGCTATGCATGTACGTCTGCAGCCGT
TGACAAGAATGATTGCCTCCGTGGTCGATGACTATACCTTGGTTGGTTTT
TTGCCTTTGGACCCAAACGAGGAGGATAGCTGGGACGCGATTTTGGCGCA
GGCTGACATGGCGTTGCAGTATGGGGAGGACTTAGAGCCACGGGAGCCGC
GAGATTATGTGGAGGGAGAGGGCGATGCGGAGGGGGAGGAAGAGAGCGGC
AATGGTGAACAAGTGTTCGAATAGAAAACAATATGGAATGAGGTTAAAAG
TAAAACAAAGCACAATAAAAAGTTTTAAAAATCG
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protein sequence of NO04G03040.1

>NO04G03040.1-protein ID=NO04G03040.1-protein|Name=NO04G03040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MPRCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAE
GPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEER
LGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLID
AHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMD
SAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAI
LAQADMALQYGEDLEPREPRDYVEGEGDAEGEEESGNGEQVFE*
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Synonyms
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