NO04G03040, NO04G03040 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03040 vs. NCBI_GenBank
Match: EWM28720.1 (gpn-loop gtpase 3 [Nannochloropsis gaditana]) HSP 1 Score: 331.3 bits (848), Expect = 3.100e-87 Identity = 165/197 (83.76%), Postives = 183/197 (92.89%), Query Frame = 0 Query: 87 MEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGEGDAEGEE 284 MEYLLENLEWLEERL +FAE DYLVFDCPGQVELYSHIPVMK+LV+FLVKGPL +VCG+YLIDAHFM+DPSKFVAGALLCLSTMIALE+PQVN+ISKADLV KEE+E++L+MDSAAMVARMGHLA H RLQPLT IA+VVDDYTLVGFLPLDPN+E+SWDAILAQADMALQ+GEDLEPREPRD V G+G E E+ Sbjct: 1 MEYLLENLEWLEERLEVFAEGDYLVFDCPGQVELYSHIPVMKHLVDFLVKGPLSLSVCGVYLIDAHFMVDPSKFVAGALLCLSTMIALEVPQVNIISKADLVDKEEIERVLDMDSAAMVARMGHLAAHGRLQPLTHTIAAVVDDYTLVGFLPLDPNDENSWDAILAQADMALQFGEDLEPREPRDDV-GDGRTEDED 196
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_008612822.1 (GPN-loop GTPase [Saprolegnia diclina VS20] >EQC33599.1 GPN-loop GTPase [Saprolegnia diclina VS20]) HSP 1 Score: 277.7 bits (709), Expect = 4.100e-71 Identity = 134/269 (49.81%), Postives = 192/269 (71.38%), Query Frame = 0 Query: 3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRD 272 RCCQ+VMGPAG GKSTYCK + EH R +V+NLDPAAE F Y D+R+LI+++DVME + GPNG LVYCMEYL++NL+WL++ L +++DDY +FDCPGQ+ELYSH+PVMK+L L G GF++CG+YLID+ F+ DPSKF++G L LS M+ LE+P VNV++K DL + E+E+ L+ S ++ + A + + QPL+R + +V++DY++V F+P++ +E S D +L D A+ YGED+EP+EP+D Sbjct: 2 RCCQIVMGPAGTGKSTYCKNMHEHC------ATTGRMTYVVNLDPAAE-TFDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLVEYSDDDYFIFDCPGQIELYSHLPVMKSLCAAL--GDWGFSICGVYLIDSLFISDPSKFISGVLCSLSAMVQLELPHVNVLTKCDLADELEVEKYLDPSSGYLLESLTQ-ATNDKWQPLSRAVCNVINDYSMVAFVPMNITDEGSMDVVLQHIDHAINYGEDMEPKEPKD 259
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_012200067.1 (hypothetical protein SPRG_05432 [Saprolegnia parasitica CBS 223.65] >KDO29190.1 hypothetical protein SPRG_05432 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 271.9 bits (694), Expect = 2.300e-69 Identity = 132/265 (49.81%), Postives = 188/265 (70.94%), Query Frame = 0 Query: 3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPR 268 RCCQ+VMGPAG GKSTYCK + EH R +V+NLDPAAE F Y D+R+LI+++DVME + GPNG LVYCMEYL++NL+WL++ L +++DDY +FDCPGQ+ELYSH+PVMK+L L G GF++CG+YLID+ F+ DPSKF++G L LS M+ LE+P VNV++K DL + E+E+ L+ S ++ + A + + QPL+R + +V++DY++V F+P++ +E S D +L D A+ YGEDLEP+ Sbjct: 2 RCCQIVMGPAGTGKSTYCKNMHEHC------ATTGRMTYVVNLDPAAE-TFDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLVEYSDDDYFIFDCPGQIELYSHLPVMKSLCAAL--GDWGFSICGVYLIDSLFISDPSKFISGVLCSLSAMVQLELPHVNVLTKCDLADELEIEKYLDPSSGYLLESLTQ-ATNDKWQPLSRAVCNVINDYSMVAFVPMNITDEGSMDVVLQHIDHAINYGEDLEPK 255
BLAST of NO04G03040 vs. NCBI_GenBank
Match: OQS02321.1 (GPN-loop GTPase [Thraustotheca clavata]) HSP 1 Score: 270.8 bits (691), Expect = 5.000e-69 Identity = 131/266 (49.25%), Postives = 189/266 (71.05%), Query Frame = 0 Query: 3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPRE 269 RCCQ+VMGPAG GKSTYCK + EH R +V+NLDPAA+ F Y D+R+LI+++DVME + GPNG LVYCMEYL++NL+WL++ L +++DDY +FDCPGQ+ELYSH+PVMK+L L GF++CG+YLID+ F+ DPSKF++G L LS MI LE+P VNV++K DL + E+E+ L+ S ++ + A + + QPL+R + +V++DY++V F+P++ +E+S + +L D A+ YGEDLEP+E Sbjct: 2 RCCQIVMGPAGTGKSTYCKNMHEHC------ATTGRMTYVVNLDPAADN-FDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLVEYSDDDYFIFDCPGQIELYSHLPVMKSLCTAL--KDWGFSICGVYLIDSLFISDPSKFISGVLCSLSAMIQLELPHVNVLTKCDLADENEIEKYLDPSSGYLLESLTQ-ATNDKWQPLSRAVCNVINDYSMVAFVPMNITDENSMEVVLQHIDHAINYGEDLEPKE 256
BLAST of NO04G03040 vs. NCBI_GenBank
Match: OQR95082.1 (GPN-loop GTPase [Achlya hypogyna]) HSP 1 Score: 270.0 bits (689), Expect = 8.600e-69 Identity = 132/283 (46.64%), Postives = 193/283 (68.20%), Query Frame = 0 Query: 3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYL--------------IDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRD 272 RCCQ+VMGPAG GKSTYCK + EH R +++NLDPAA+ F Y D+R+LI+++DVME + GPNG LVYCMEYL++NL+WL++ L +++DDY +FDCPGQ+ELYSH+PVMK+L L GFA+CG+YL ID+ F+ DPSKF++G L LS M+ LE+P VNV++K DL ++E+E+ L+ S ++ + A + + QPL+R + +V++DY++V F+P++ +EDS + +L D A+ YGED+EP+EP+D Sbjct: 2 RCCQIVMGPAGTGKSTYCKNMHEHC------ATTGRMTYIVNLDPAADN-FDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLVEYSDDDYFIFDCPGQIELYSHLPVMKSLCSAL--SDWGFAICGVYLVGFFSYIRGLMPRQIDSLFISDPSKFISGVLCSLSAMVQLELPHVNVLTKCDLADEQEIEKYLDPSSGYLLESLTQ-ATNDKWQPLSRAVCNVINDYSMVAFVPMNITDEDSMEVVLQHIDHAINYGEDMEPKEPKD 273
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_009836816.1 (hypothetical protein H257_11537 [Aphanomyces astaci] >ETV73879.1 hypothetical protein H257_11537 [Aphanomyces astaci]) HSP 1 Score: 268.9 bits (686), Expect = 1.900e-68 Identity = 131/269 (48.70%), Postives = 193/269 (71.75%), Query Frame = 0 Query: 3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRD 272 R CQ+VMGPAG GKSTYCK + E A R +V+NLDPAA+ F Y D+R+LI+++DVME + GPNG LVYCMEYL++NL+WL++ L +++DDY +FDCPGQ+ELYSH+PVMK+L L + GF++CG+YLID+ F+ DP+KF++G L LS M+ LE+P VNV++K DLV ++ELE+ L+ S ++ + A + QPL+R + +V++DY++V F+P++ +E+S + +L D A+ YGED+EP+EP+D Sbjct: 2 RSCQIVMGPAGTGKSTYCKNMHEFC------AASGRLTYVVNLDPAAD-HFEYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLLEYSDDDYFIFDCPGQIELYSHLPVMKHLCTALQE--WGFSICGVYLIDSLFISDPAKFISGILCSLSAMVQLELPHVNVLTKCDLVDEQELEKYLDPSSGYLLETLSS-ATTDKWQPLSRAVCNVINDYSMVAFVPMNIQDEESIEMVLHHIDHAINYGEDIEPKEPKD 259
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_008869861.1 (hypothetical protein H310_06531 [Aphanomyces invadans] >ETW02013.1 hypothetical protein H310_06531 [Aphanomyces invadans]) HSP 1 Score: 268.9 bits (686), Expect = 1.900e-68 Identity = 132/274 (48.18%), Postives = 195/274 (71.17%), Query Frame = 0 Query: 3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGE 277 R CQ+VMGPAG GKSTYCK + E A R +V+NLDPAAE F Y D+R+LI+++DVME + GPNG LVYCMEYL++NL+WL++ L +++DDY +FDCPGQ+ELYSH+PVMK+L L + F++CG+YLID+ F+ DPSKF++G L LS M+ LE+P VNV++K DLV ++ELE+ L+ S ++ + + + + QPL+R + +V++DY++V F+P++ +E+S + +L D A+ YGED+EP+EP+D + E Sbjct: 2 RSCQIVMGPAGTGKSTYCKNMHEFC------AASGRLTYVVNLDPAAES-FDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLLEYSDDDYFIFDCPGQIELYSHLPVMKHLCTALQE--WSFSICGVYLIDSLFISDPSKFISGILCSLSAMVQLELPHVNVLTKCDLVDEQELEKYLDPSSGYLLETLTNATTN-KWQPLSRAVCNVINDYSMVAFVPMNITDEESIEMVLHHIDHAINYGEDVEPKEPKDDMADE 264
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_012560172.1 (PREDICTED: GPN-loop GTPase 3-like [Hydra vulgaris]) HSP 1 Score: 268.1 bits (684), Expect = 3.300e-68 Identity = 143/274 (52.19%), Postives = 193/274 (70.44%), Query Frame = 0 Query: 3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMD--LGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEEL---EQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRD 272 R QL+MGPAG GKSTYCK + EH RR V+VINLDPAAE F+Y DVREL+ V+DVME D LGPNG LV+CMEYL++NL+WL E+LG EDDY +FDCPGQ+ELY+HIP+M+ LV+ L + F +CG++++DA F++D SKF +G + LS MI LEIP +NV+SK DL+ KE + E L D+ ++ + + A+ ++ + L + IAS++DDY+LV F+P++ EEDS + ILA D A+QYGEDLEPR P+D Sbjct: 2 RYAQLIMGPAGSGKSTYCKYMHEHCE------TLRREVNVINLDPAAEN-FSYPL-YADVRELVDVNDVMEAEDLKLGPNGGLVFCMEYLMQNLDWLNEQLG-EGEDDYFIFDCPGQIELYTHIPIMRQLVQSLQQH--DFRICGVFIVDAQFLVDASKFFSGVMAALSAMIQLEIPHINVMSKMDLLDKESINIVENYLNPDAGLLLHDL-NSALPIKFKKLNKAIASLIDDYSLVSFVPMNIKEEDSINDILAYIDNAIQYGEDLEPRMPQD 263
BLAST of NO04G03040 vs. NCBI_GenBank
Match: ORY06299.1 (hypothetical protein K493DRAFT_333186 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 266.9 bits (681), Expect = 7.300e-68 Identity = 140/282 (49.65%), Postives = 194/282 (68.79%), Query Frame = 0 Query: 1 MPRCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLV----GKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGEGD 279 M + CQLVMGPAG GKST+C + H Q G R+VH++NLDPAAE F Y P +D+RELIT++DVM+ +D GPNG L+YC+E+LL N++WLEE LG + EDDYL+FDCPGQ+ELY+H P+MK + E L + F++CG+YL+++ F+ D SK+ +G L +S MI LEIP +NV+SK DLV EL++ LE D ++ + + R L I ++DDY +V F+PL+P++EDS LAQ D A+QYGED+EP+EP+D GEG+ Sbjct: 1 MGKHCQLVMGPAGSGKSTFCSTIMTHC---QSIG---RSVHLVNLDPAAE-HFTYE-PTIDIRELITLEDVMDELDYGPNGGLIYCLEFLLNNIDWLEEELGDY-EDDYLIFDCPGQIELYTHFPIMKRMCETLQR--WNFSICGVYLLESQFIEDKSKYFSGVLSAMSAMINLEIPHINVMSKMDLVSPNLNPRELDRYLETDPTLLIDDV-NAHTSPRFHSLNEAIVQLIDDYNMVNFIPLNPSDEDSITYTLAQIDNAMQYGEDIEPKEPQD---GEGE 267
BLAST of NO04G03040 vs. NCBI_GenBank
Match: ORX86365.1 (ATP binding domain family protein [Anaeromyces robustus]) HSP 1 Score: 266.5 bits (680), Expect = 9.500e-68 Identity = 137/279 (49.10%), Postives = 192/279 (68.82%), Query Frame = 0 Query: 5 CQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKE-----ELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGEGD 279 CQLV+GPAG GKSTYC+ + H + +R+VH++NLDPAAE F Y P +D+R+LIT+DDVME +D GPNG LVYCME+L+ N+ WLEE L + EDDYL+FDCPGQ+ELY+H P+MK++V+ L K + VC +YL+D+ F+ D SKF +G L +S MI LEIP +NV++K DL+ K+ + E+ LE+DS+ + + + M R Q L I ++D+Y +V FLPLD +E+S +LAQ D ++QYGEDLE +E D+ E + D Sbjct: 15 CQLVIGPAGSGKSTYCRTIMSHCQ------SIKRSVHLVNLDPAAEN-FEYE-PTIDIRDLITLDDVMEELDYGPNGGLVYCMEFLINNINWLEEELNNY-EDDYLIFDCPGQIELYTHFPIMKSIVQTLQK--YDYNVCCVYLLDSQFIEDTSKFFSGVLNAMSAMIQLEIPHINVLTKVDLLDKKLQRSRDFERYLEVDSSLLTEDINN-RMRPRYQHLNEAIVQLIDEYNMVNFLPLDITDEESIAYVLAQVDNSIQYGEDLEVKEREDFTEVDDD 281 The following BLAST results are available for this feature:
BLAST of NO04G03040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03040 ID=NO04G03040|Name=NO04G03040|organism=Nannochloropsis oceanica|type=gene|length=1784bpback to top protein sequence of NO04G03040.1 >NO04G03040.1-protein ID=NO04G03040.1-protein|Name=NO04G03040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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