NO04G03040, NO04G03040 (gene) Nannochloropsis oceanica

Overview
NameNO04G03040
Unique NameNO04G03040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1784
Alignment locationchr4:815982..817765 +

Link to JBrowse

Properties
Property NameValue
DescriptionGpn-loop gtpase 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:815982..817765 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030228Gpn3
IPR004130Gpn
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Homology
BLAST of NO04G03040 vs. NCBI_GenBank
Match: EWM28720.1 (gpn-loop gtpase 3 [Nannochloropsis gaditana])

HSP 1 Score: 331.3 bits (848), Expect = 3.100e-87
Identity = 165/197 (83.76%), Postives = 183/197 (92.89%), Query Frame = 0
Query:   87 MEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGEGDAEGEE 284
            MEYLLENLEWLEERL +FAE DYLVFDCPGQVELYSHIPVMK+LV+FLVKGPL  +VCG+YLIDAHFM+DPSKFVAGALLCLSTMIALE+PQVN+ISKADLV KEE+E++L+MDSAAMVARMGHLA H RLQPLT  IA+VVDDYTLVGFLPLDPN+E+SWDAILAQADMALQ+GEDLEPREPRD V G+G  E E+
Sbjct:    1 MEYLLENLEWLEERLEVFAEGDYLVFDCPGQVELYSHIPVMKHLVDFLVKGPLSLSVCGVYLIDAHFMVDPSKFVAGALLCLSTMIALEVPQVNIISKADLVDKEEIERVLDMDSAAMVARMGHLAAHGRLQPLTHTIAAVVDDYTLVGFLPLDPNDENSWDAILAQADMALQFGEDLEPREPRDDV-GDGRTEDED 196          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_008612822.1 (GPN-loop GTPase [Saprolegnia diclina VS20] >EQC33599.1 GPN-loop GTPase [Saprolegnia diclina VS20])

HSP 1 Score: 277.7 bits (709), Expect = 4.100e-71
Identity = 134/269 (49.81%), Postives = 192/269 (71.38%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRD 272
            RCCQ+VMGPAG GKSTYCK + EH           R  +V+NLDPAAE  F Y     D+R+LI+++DVME +  GPNG LVYCMEYL++NL+WL++ L  +++DDY +FDCPGQ+ELYSH+PVMK+L   L  G  GF++CG+YLID+ F+ DPSKF++G L  LS M+ LE+P VNV++K DL  + E+E+ L+  S  ++  +   A + + QPL+R + +V++DY++V F+P++  +E S D +L   D A+ YGED+EP+EP+D
Sbjct:    2 RCCQIVMGPAGTGKSTYCKNMHEHC------ATTGRMTYVVNLDPAAE-TFDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLVEYSDDDYFIFDCPGQIELYSHLPVMKSLCAAL--GDWGFSICGVYLIDSLFISDPSKFISGVLCSLSAMVQLELPHVNVLTKCDLADELEVEKYLDPSSGYLLESLTQ-ATNDKWQPLSRAVCNVINDYSMVAFVPMNITDEGSMDVVLQHIDHAINYGEDMEPKEPKD 259          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_012200067.1 (hypothetical protein SPRG_05432 [Saprolegnia parasitica CBS 223.65] >KDO29190.1 hypothetical protein SPRG_05432 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 271.9 bits (694), Expect = 2.300e-69
Identity = 132/265 (49.81%), Postives = 188/265 (70.94%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPR 268
            RCCQ+VMGPAG GKSTYCK + EH           R  +V+NLDPAAE  F Y     D+R+LI+++DVME +  GPNG LVYCMEYL++NL+WL++ L  +++DDY +FDCPGQ+ELYSH+PVMK+L   L  G  GF++CG+YLID+ F+ DPSKF++G L  LS M+ LE+P VNV++K DL  + E+E+ L+  S  ++  +   A + + QPL+R + +V++DY++V F+P++  +E S D +L   D A+ YGEDLEP+
Sbjct:    2 RCCQIVMGPAGTGKSTYCKNMHEHC------ATTGRMTYVVNLDPAAE-TFDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLVEYSDDDYFIFDCPGQIELYSHLPVMKSLCAAL--GDWGFSICGVYLIDSLFISDPSKFISGVLCSLSAMVQLELPHVNVLTKCDLADELEIEKYLDPSSGYLLESLTQ-ATNDKWQPLSRAVCNVINDYSMVAFVPMNITDEGSMDVVLQHIDHAINYGEDLEPK 255          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: OQS02321.1 (GPN-loop GTPase [Thraustotheca clavata])

HSP 1 Score: 270.8 bits (691), Expect = 5.000e-69
Identity = 131/266 (49.25%), Postives = 189/266 (71.05%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPRE 269
            RCCQ+VMGPAG GKSTYCK + EH           R  +V+NLDPAA+  F Y     D+R+LI+++DVME +  GPNG LVYCMEYL++NL+WL++ L  +++DDY +FDCPGQ+ELYSH+PVMK+L   L     GF++CG+YLID+ F+ DPSKF++G L  LS MI LE+P VNV++K DL  + E+E+ L+  S  ++  +   A + + QPL+R + +V++DY++V F+P++  +E+S + +L   D A+ YGEDLEP+E
Sbjct:    2 RCCQIVMGPAGTGKSTYCKNMHEHC------ATTGRMTYVVNLDPAADN-FDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLVEYSDDDYFIFDCPGQIELYSHLPVMKSLCTAL--KDWGFSICGVYLIDSLFISDPSKFISGVLCSLSAMIQLELPHVNVLTKCDLADENEIEKYLDPSSGYLLESLTQ-ATNDKWQPLSRAVCNVINDYSMVAFVPMNITDENSMEVVLQHIDHAINYGEDLEPKE 256          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: OQR95082.1 (GPN-loop GTPase [Achlya hypogyna])

HSP 1 Score: 270.0 bits (689), Expect = 8.600e-69
Identity = 132/283 (46.64%), Postives = 193/283 (68.20%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYL--------------IDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRD 272
            RCCQ+VMGPAG GKSTYCK + EH           R  +++NLDPAA+  F Y     D+R+LI+++DVME +  GPNG LVYCMEYL++NL+WL++ L  +++DDY +FDCPGQ+ELYSH+PVMK+L   L     GFA+CG+YL              ID+ F+ DPSKF++G L  LS M+ LE+P VNV++K DL  ++E+E+ L+  S  ++  +   A + + QPL+R + +V++DY++V F+P++  +EDS + +L   D A+ YGED+EP+EP+D
Sbjct:    2 RCCQIVMGPAGTGKSTYCKNMHEHC------ATTGRMTYIVNLDPAADN-FDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLVEYSDDDYFIFDCPGQIELYSHLPVMKSLCSAL--SDWGFAICGVYLVGFFSYIRGLMPRQIDSLFISDPSKFISGVLCSLSAMVQLELPHVNVLTKCDLADEQEIEKYLDPSSGYLLESLTQ-ATNDKWQPLSRAVCNVINDYSMVAFVPMNITDEDSMEVVLQHIDHAINYGEDMEPKEPKD 273          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_009836816.1 (hypothetical protein H257_11537 [Aphanomyces astaci] >ETV73879.1 hypothetical protein H257_11537 [Aphanomyces astaci])

HSP 1 Score: 268.9 bits (686), Expect = 1.900e-68
Identity = 131/269 (48.70%), Postives = 193/269 (71.75%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRD 272
            R CQ+VMGPAG GKSTYCK + E         A  R  +V+NLDPAA+  F Y     D+R+LI+++DVME +  GPNG LVYCMEYL++NL+WL++ L  +++DDY +FDCPGQ+ELYSH+PVMK+L   L +   GF++CG+YLID+ F+ DP+KF++G L  LS M+ LE+P VNV++K DLV ++ELE+ L+  S  ++  +   A   + QPL+R + +V++DY++V F+P++  +E+S + +L   D A+ YGED+EP+EP+D
Sbjct:    2 RSCQIVMGPAGTGKSTYCKNMHEFC------AASGRLTYVVNLDPAAD-HFEYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLLEYSDDDYFIFDCPGQIELYSHLPVMKHLCTALQE--WGFSICGVYLIDSLFISDPAKFISGILCSLSAMVQLELPHVNVLTKCDLVDEQELEKYLDPSSGYLLETLSS-ATTDKWQPLSRAVCNVINDYSMVAFVPMNIQDEESIEMVLHHIDHAINYGEDIEPKEPKD 259          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_008869861.1 (hypothetical protein H310_06531 [Aphanomyces invadans] >ETW02013.1 hypothetical protein H310_06531 [Aphanomyces invadans])

HSP 1 Score: 268.9 bits (686), Expect = 1.900e-68
Identity = 132/274 (48.18%), Postives = 195/274 (71.17%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGE 277
            R CQ+VMGPAG GKSTYCK + E         A  R  +V+NLDPAAE  F Y     D+R+LI+++DVME +  GPNG LVYCMEYL++NL+WL++ L  +++DDY +FDCPGQ+ELYSH+PVMK+L   L +    F++CG+YLID+ F+ DPSKF++G L  LS M+ LE+P VNV++K DLV ++ELE+ L+  S  ++  + +   + + QPL+R + +V++DY++V F+P++  +E+S + +L   D A+ YGED+EP+EP+D +  E
Sbjct:    2 RSCQIVMGPAGTGKSTYCKNMHEFC------AASGRLTYVVNLDPAAES-FDYPV-AFDIRDLISLEDVMEELGYGPNGGLVYCMEYLIQNLDWLQDLLLEYSDDDYFIFDCPGQIELYSHLPVMKHLCTALQE--WSFSICGVYLIDSLFISDPSKFISGILCSLSAMVQLELPHVNVLTKCDLVDEQELEKYLDPSSGYLLETLTNATTN-KWQPLSRAVCNVINDYSMVAFVPMNITDEESIEMVLHHIDHAINYGEDVEPKEPKDDMADE 264          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: XP_012560172.1 (PREDICTED: GPN-loop GTPase 3-like [Hydra vulgaris])

HSP 1 Score: 268.1 bits (684), Expect = 3.300e-68
Identity = 143/274 (52.19%), Postives = 193/274 (70.44%), Query Frame = 0
Query:    3 RCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMD--LGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEEL---EQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRD 272
            R  QL+MGPAG GKSTYCK + EH          RR V+VINLDPAAE  F+Y     DVREL+ V+DVME  D  LGPNG LV+CMEYL++NL+WL E+LG   EDDY +FDCPGQ+ELY+HIP+M+ LV+ L +    F +CG++++DA F++D SKF +G +  LS MI LEIP +NV+SK DL+ KE +   E  L  D+  ++  + + A+ ++ + L + IAS++DDY+LV F+P++  EEDS + ILA  D A+QYGEDLEPR P+D
Sbjct:    2 RYAQLIMGPAGSGKSTYCKYMHEHCE------TLRREVNVINLDPAAEN-FSYPL-YADVRELVDVNDVMEAEDLKLGPNGGLVFCMEYLMQNLDWLNEQLG-EGEDDYFIFDCPGQIELYTHIPIMRQLVQSLQQH--DFRICGVFIVDAQFLVDASKFFSGVMAALSAMIQLEIPHINVMSKMDLLDKESINIVENYLNPDAGLLLHDL-NSALPIKFKKLNKAIASLIDDYSLVSFVPMNIKEEDSINDILAYIDNAIQYGEDLEPRMPQD 263          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: ORY06299.1 (hypothetical protein K493DRAFT_333186 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 266.9 bits (681), Expect = 7.300e-68
Identity = 140/282 (49.65%), Postives = 194/282 (68.79%), Query Frame = 0
Query:    1 MPRCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLV----GKEELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGEGD 279
            M + CQLVMGPAG GKST+C  +  H    Q  G   R+VH++NLDPAAE  F Y  P +D+RELIT++DVM+ +D GPNG L+YC+E+LL N++WLEE LG + EDDYL+FDCPGQ+ELY+H P+MK + E L +    F++CG+YL+++ F+ D SK+ +G L  +S MI LEIP +NV+SK DLV       EL++ LE D   ++  + +     R   L   I  ++DDY +V F+PL+P++EDS    LAQ D A+QYGED+EP+EP+D   GEG+
Sbjct:    1 MGKHCQLVMGPAGSGKSTFCSTIMTHC---QSIG---RSVHLVNLDPAAE-HFTYE-PTIDIRELITLEDVMDELDYGPNGGLIYCLEFLLNNIDWLEEELGDY-EDDYLIFDCPGQIELYTHFPIMKRMCETLQR--WNFSICGVYLLESQFIEDKSKYFSGVLSAMSAMINLEIPHINVMSKMDLVSPNLNPRELDRYLETDPTLLIDDV-NAHTSPRFHSLNEAIVQLIDDYNMVNFIPLNPSDEDSITYTLAQIDNAMQYGEDIEPKEPQD---GEGE 267          
BLAST of NO04G03040 vs. NCBI_GenBank
Match: ORX86365.1 (ATP binding domain family protein [Anaeromyces robustus])

HSP 1 Score: 266.5 bits (680), Expect = 9.500e-68
Identity = 137/279 (49.10%), Postives = 192/279 (68.82%), Query Frame = 0
Query:    5 CQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAEGPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEERLGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLIDAHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKE-----ELEQILEMDSAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAILAQADMALQYGEDLEPREPRDYVEGEGD 279
            CQLV+GPAG GKSTYC+ +  H        + +R+VH++NLDPAAE  F Y  P +D+R+LIT+DDVME +D GPNG LVYCME+L+ N+ WLEE L  + EDDYL+FDCPGQ+ELY+H P+MK++V+ L K    + VC +YL+D+ F+ D SKF +G L  +S MI LEIP +NV++K DL+ K+     + E+ LE+DS+ +   + +  M  R Q L   I  ++D+Y +V FLPLD  +E+S   +LAQ D ++QYGEDLE +E  D+ E + D
Sbjct:   15 CQLVIGPAGSGKSTYCRTIMSHCQ------SIKRSVHLVNLDPAAEN-FEYE-PTIDIRDLITLDDVMEELDYGPNGGLVYCMEFLINNINWLEEELNNY-EDDYLIFDCPGQIELYTHFPIMKSIVQTLQK--YDYNVCCVYLLDSQFIEDTSKFFSGVLNAMSAMIQLEIPHINVLTKVDLLDKKLQRSRDFERYLEVDSSLLTEDINN-RMRPRYQHLNEAIVQLIDEYNMVNFLPLDITDEESIAYVLAQVDNSIQYGEDLEVKEREDFTEVDDD 281          
The following BLAST results are available for this feature:
BLAST of NO04G03040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28720.13.100e-8783.76gpn-loop gtpase 3 [Nannochloropsis gaditana][more]
XP_008612822.14.100e-7149.81GPN-loop GTPase [Saprolegnia diclina VS20] >EQC335... [more]
XP_012200067.12.300e-6949.81hypothetical protein SPRG_05432 [Saprolegnia paras... [more]
OQS02321.15.000e-6949.25GPN-loop GTPase [Thraustotheca clavata][more]
OQR95082.18.600e-6946.64GPN-loop GTPase [Achlya hypogyna][more]
XP_009836816.11.900e-6848.70hypothetical protein H257_11537 [Aphanomyces astac... [more]
XP_008869861.11.900e-6848.18hypothetical protein H310_06531 [Aphanomyces invad... [more]
XP_012560172.13.300e-6852.19PREDICTED: GPN-loop GTPase 3-like [Hydra vulgaris][more]
ORY06299.17.300e-6849.65hypothetical protein K493DRAFT_333186 [Basidiobolu... [more]
ORX86365.19.500e-6849.10ATP binding domain family protein [Anaeromyces rob... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009511NSK009511Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03040.1NO04G03040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578954gene_2075Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g25gene1904Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03040.1NO04G03040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03040 ID=NO04G03040|Name=NO04G03040|organism=Nannochloropsis oceanica|type=gene|length=1784bp
GGGCGATAGAACCTCTGTCTTTGATGTAAAGGGAATAGAGATTAACACAT
GTGTTTGGGTGAAGATACGTCGTGAGATCGCAAGCGAGAAAAAAAAAGAA
ATATGCACCAACCGGGAATCGCACAGGCTTACGACAATCTGAGCACAACC
AAATCGCTCGATTGGTGACGGAAATCATATCGCAAGGAACCCGGGCCTAA
ACCTTGGGAAGGTTCAATCCTACCACTAGACTATTGGTGCAGTTGATCAA
CGTTCGGGGTGACCAATACTATCTATATTTTCTACCCCAAGTGCAAATCC
TCTTTTTTATGCCTTTAAGTTGCCATGTTATCCCTCACCACAATACATAC
GACTCAAGAGAACCACCCAATTTTAGTAACAAAGGAAAGTATACAGTATA
CAGGTAGGGTTAACATTTTTGGTGGCAATTGTGATTTCTTATATTTGCGA
AAGGGTTGTATCGACATCGAGACTCTTTCGTGGACAATTTTTCAAGAAGA
GGTCAGTTTCTGGCTCCTTCTCTGCCCGCATGATCATGCCTTGATCTTCT
ATCACACGGGCAACACTGGTACCTGTACATTTGCGGGCTTTTTTTGCCGT
CGATTTGTGTCGTCTAGCTGCCCTACTATCCGAGATTCCCCAGCCTTCTC
AGGGGACACTATCTAACGCCCTATCAAAACCCCAAAAAATAATGGCAGGG
CGTACCATGGTGCTGCTACCCTCACATAGCCTTATAAGCGTGTTCACGAT
CAAGAACGGTGTGTTATCCCATTTACTGTGATAGGTTTTCCGTCAAATAG
GATTTTTTAGTCTCCTGCTCCCGCTTGCAGGCAACATCCACCATGCCTCG
ATGTTGCCAACTCGTCATGGGGCCCGCCGGTGTAGGCAAGTCCACATACT
GCAAGCTTTTACAAGAACATAGCACTGCCCAGCAGGGACCTGGGGCTCAG
CGTCGCGCCGTGCACGTCATTAATCTTGACCCGGCGGCCGAGGGGCCCTT
CGCCTACTCGACACCAGAAGTAGACGTACGGGAGCTCATTACTGTAGACG
ACGTCATGGAAATGATGGATTTGGGGCCAAACGGTGCATTAGTGTATTGC
ATGGAATACTTGTTGGAAAATTTGGAATGGCTGGAGGAGCGGCTGGGGTT
GTTTGCGGAGGATGATTATTTGGTCTTTGATTGCCCGGGCCAGGTTGAGC
TGTATTCGCACATTCCTGTTATGAAAAATCTGGTGGAATTTCTCGTCAAA
GGCCCGCTGGGCTTTGCTGTGTGTGGGATTTATTTGATCGATGCGCATTT
TATGATGGACCCGAGTAAATTTGTGGCGGGTGCGCTGCTTTGTCTCTCGA
CCATGATTGCTCTAGAGATACCTCAAGTGAATGTTATTTCCAAGGCAGAC
CTTGTTGGTAAGGAGGAGCTGGAACAAATACTGGAGATGGATTCTGCGGC
TATGGTGGCACGGATGGGTCATTTGGCTATGCATGTACGTCTGCAGCCGT
TGACAAGAATGATTGCCTCCGTGGTCGATGACTATACCTTGGTTGGTTTT
TTGCCTTTGGACCCAAACGAGGAGGATAGCTGGGACGCGATTTTGGCGCA
GGCTGACATGGCGTTGCAGTATGGGGAGGACTTAGAGCCACGGGAGCCGC
GAGATTATGTGGAGGGAGAGGGCGATGCGGAGGGGGAGGAAGAGAGCGGC
AATGGTGAACAAGTGTTCGAATAGAAAACAATATGGAATGAGGTTAAAAG
TAAAACAAAGCACAATAAAAAGTTTTAAAAATCG
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protein sequence of NO04G03040.1

>NO04G03040.1-protein ID=NO04G03040.1-protein|Name=NO04G03040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MPRCCQLVMGPAGVGKSTYCKLLQEHSTAQQGPGAQRRAVHVINLDPAAE
GPFAYSTPEVDVRELITVDDVMEMMDLGPNGALVYCMEYLLENLEWLEER
LGLFAEDDYLVFDCPGQVELYSHIPVMKNLVEFLVKGPLGFAVCGIYLID
AHFMMDPSKFVAGALLCLSTMIALEIPQVNVISKADLVGKEELEQILEMD
SAAMVARMGHLAMHVRLQPLTRMIASVVDDYTLVGFLPLDPNEEDSWDAI
LAQADMALQYGEDLEPREPRDYVEGEGDAEGEEESGNGEQVFE*
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