NO04G02790, NO04G02790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02790 vs. NCBI_GenBank
Match: EWM28801.1 (Glycoside hydrolase-type carbohydrate-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 499.6 bits (1285), Expect = 8.100e-138 Identity = 242/298 (81.21%), Postives = 270/298 (90.60%), Query Frame = 0 Query: 52 MLKRSL-AFALVGVSVANAFFM-APAPRASATTMLAGKATLDTLDRVVLTDDATGHSATVHLHGGCITSYKAPHEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQSMTEPEVTLVLKESAESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGKTPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKGPMALHDKARRVRTTVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEW 348 MLK +L A V S+++AF + A + R SAT ++AGKATLDTL RVVLTDD TGHSATVHLHGGC+TSYKAPHEVLGIR DA FTG KPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQS +EPEVTLVLKESAE+RKIWDQAFEL LTVRLEGDH+LTRLTAKNTG TPW+FTSALHSYYSVSD++KTTIIG L+G+TFVDKTQ+P VSAPL +SE+G+TKFLEGV+PDYKGPMALHDKA RVRTTVEHV+GW+DY+LWAPVGNDGMGYK FVC+ESGAVS+PV+V GGSEW Sbjct: 1 MLKYALIAILAVMGSLSDAFLLPATSSRESATALMAGKATLDTLKRVVLTDDVTGHSATVHLHGGCVTSYKAPHEVLGIRKDAAFTGEKPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQSDSEPEVTLVLKESAETRKIWDQAFELLLTVRLEGDHLLTRLTAKNTGSTPWEFTSALHSYYSVSDVAKTTIIGNDLAGRTFVDKTQNPHVSAPLQSSEVGVTKFLEGVVPDYKGPMALHDKAGRVRTTVEHVRGWSDYVLWAPVGNDGMGYKKFVCLESGAVSRPVSVAGGSEW 298
BLAST of NO04G02790 vs. NCBI_GenBank
Match: XP_005782405.1 (hypothetical protein EMIHUDRAFT_434460 [Emiliania huxleyi CCMP1516] >EOD29976.1 hypothetical protein EMIHUDRAFT_434460 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 219.9 bits (559), Expect = 1.200e-53 Identity = 111/260 (42.69%), Postives = 153/260 (58.85%), Query Frame = 0 Query: 95 RVVLTDDATGHSATVHLHGGCITSY-KAPHEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQSMTEPEVTLVLKESAESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGKTPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKGPMALHDKARRVRTTVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEWVGEMKI 354 + V +A G S TV+ G CITSY K +VL +R DA G+KPI+GG+ CWPQFGPGAIQQHGFARNL W V QS + +V + L ESA + +W AF+L +V LE D + T NT P FT ALH+Y+S DI K I + +G T++DK Q P + + I ++ V G + L + A T+++ GW+D ++W+P G++GMGYK+FVCVES + PV +E G W G M++ Sbjct: 15 KTVSLSNAAGDSVTVYTFGACITSYVKGGTDVLAVRPDAKLDGSKPISGGIPFCWPQFGPGAIQQHGFARNLDWTVVEQS--DSKVVMELTESAYTMDMWPHAFKLQYSVTLEDDRLATDFCVTNTDSKPLSFTGALHTYWSCDDIDKVAIKAPAFAGATYLDKMQSPPADVKSASDTISIGAPVDSVYAGVSGDVVL-EGAHASPLTIKNSVGWSDTVVWSPYGDEGMGYKNFVCVESAQAATPVKLEPGEYWTGAMEV 271
BLAST of NO04G02790 vs. NCBI_GenBank
Match: XP_005757053.1 (hypothetical protein EMIHUDRAFT_446641 [Emiliania huxleyi CCMP1516] >EOD04624.1 hypothetical protein EMIHUDRAFT_446641 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 219.2 bits (557), Expect = 2.100e-53 Identity = 115/278 (41.37%), Postives = 162/278 (58.27%), Query Frame = 0 Query: 79 SATTMLAGKA--TLDTLDRVVLTDDATGHSATVHLHGGCITSY-KAPHEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQSMTEPEVTLVLKESAESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGKTPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKGPMALHDKARRVRTTVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEWVGEMKI 354 S+ M+A A +++ + V +A G S TV+ G CITSY K +VL +R DA G+KPI+GG+ CWPQFGPGAIQQHGFARNL W V QS + +V + L ESA + +W AF+L +V LE D + T NT P FT ALH+Y+S DI K I + +G T++DK Q P + + I ++ V G + L + A T+++ GW+D ++W+P G++GMGYK+FVCVES + PV +E G W G M++ Sbjct: 10 SSLRMVAAPAPELVESALKTVSLSNAAGDSVTVYTFGACITSYVKGGTDVLAVRPDAKLDGSKPISGGIPFCWPQFGPGAIQQHGFARNLDWTVVEQS--DSKVVMELTESAYTMDMWPHAFKLQYSVTLEDDRLATDFCVTNTDSKPLSFTGALHTYWSCDDIDKVAIKAPAFAGATYLDKMQSPPADVKSASDTISIGAPVDSVYAGVSGDVVL-EGAHASPLTIKNSVGWSDTVVWSPYGDEGMGYKNFVCVESAQAATPVKLEPGEYWTGAMEV 284
BLAST of NO04G02790 vs. NCBI_GenBank
Match: XP_005835949.1 (hypothetical protein GUITHDRAFT_105052 [Guillardia theta CCMP2712] >EKX48969.1 hypothetical protein GUITHDRAFT_105052 [Guillardia theta CCMP2712]) HSP 1 Score: 209.1 bits (531), Expect = 2.200e-50 Identity = 104/255 (40.78%), Postives = 148/255 (58.04%), Query Frame = 0 Query: 103 TGHSATVHLHGGCITSYKAPHEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPW---EVSAQSMTEPEVTLVLKESAESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGKTPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKGPMALHDKARRVRT-TVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEWVGEMKI 354 +G SATV+ G +TSYKAPHEVL +R DA F G+KPI+GG+ C+PQFGPG IQQHGFARNL W +VSA P VTL L E+ E+ +W F+ V L+ + + L NT PWDF +ALH+Y++VS+I K + G + G +++ P + K ++ G + L D+ + ++ T+ ++ GW D +LW P GN+GMGYK+F CVES +KP + G W+ + I Sbjct: 296 SGSSATVYPFGATVTSYKAPHEVLFVRPDAKFDGSKPISGGIPHCFPQFGPGKIQQHGFARNLVWNVKDVSADEPDMPSVTLELTETEETMAMWPNKFKCTYVVGLDEEKLNCELRVTNTDSKPWDFQAALHTYFAVSNIDKCEVRG-AFKGSEHLNRMDKPPSKTKESREAIRFDKEVDSCYEGVSGQVVLFDEVKPEQSVTIRNLAGWEDTVLWNPYGNEGMGYKNFACVESVKAAKPAVLAAGETWISRVSI 549
BLAST of NO04G02790 vs. NCBI_GenBank
Match: GAX29070.1 (hypothetical protein FisN_7Hh338 [Fistulifera solaris]) HSP 1 Score: 205.7 bits (522), Expect = 2.400e-49 Identity = 108/254 (42.52%), Postives = 154/254 (60.63%), Query Frame = 0 Query: 103 TGHSATVHLHGGCITSY-KAPHEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQSMTEPEVTLVLKESAESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGKTPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKG--PMALHDKARRVRTTVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEWVGEMKI 354 +G S+ V+L+G C+TSY + E + +R DA G+KPI+GGL CWPQFGPGAIQQHGFARN+ W V+ SMT+ V LV++ S ++++WD+ F+ TV L+ D + T++ +N G +DF +ALHSY++VS + K I G S +GK F++K + + + E YKG L D V + KGW D ++W+P GN+GMGY +FVCVES PVT+ GG WVG+M + Sbjct: 116 SGSSSQVYLYGACVTSYIQDGTEFIAVRPDAKMDGSKPISGGLSHCWPQFGPGAIQQHGFARNVNWSVA--SMTDSSVELVMEPSDYTKEMWDKQFKCTFTVTLQEDQLDTKMWVENKGDDSFDFQAALHSYFAVSSLDKLEISG-SFAGKEFLNKLVGD--GGEMQTEDREVITISEEYDRVYKGVNDPVLKDAGTGKSLAVLNTKGWADTVIWSPYGNEGMGYNNFVCVES-VKFDPVTLNGGETWVGDMSL 363
BLAST of NO04G02790 vs. NCBI_GenBank
Match: CBJ30610.1 (conserved carbohydrate binding protein [Ectocarpus siliculosus]) HSP 1 Score: 202.2 bits (513), Expect = 2.700e-48 Identity = 114/303 (37.62%), Postives = 167/303 (55.12%), Query Frame = 0 Query: 58 AFALVGVSVAN-AFFMAPAPRASATTMLAGKATLDT-----LDRVVLTDDATGHSATVHLHGGCITSYKA-PHEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQSMTEPEVTLVLKESAESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGKTPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKGPMALHDKARRVRTTVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEWVGEMKI 354 AF +G+ + + A F P P A M + A + T LT + SA V GGC+TS+K ++ L +R DA+ G+KPI+GGL C+PQFGPG IQQHGF RNL WEV T+ V+L L ++ E+ +W FE V L+G + T L NTG +DF +ALHSY+ SDI+K TI L G ++++K +DP + ++M I++ ++ V G ++++D V + +GW D ++W P GN+GMG +FVCVES V + G W G+MK+ Sbjct: 8 AFGFLGLQLTDVAGFHVPVPVQQAHNMRSTPARMATEGTNESGLKKLTISSGDASAEVFTLGGCVTSFKVKDYDYLFVRPDAMMDGSKPISGGLPHCFPQFGPGVIQQHGFGRNLEWEVVGS--TDDSVSLKLSDNEETMAMWPHPFECVYKVALDGTTLQTELAVTNTGSEDFDFQAALHSYFRCSDINKVTISSPKLDGASYLNKMKDPPATETFSGTKMTISEEVDQVFKGVTGDVSINDAGNSRVLVVSNTEGWADTVIWNPYGNEGMGADNFVCVESAQVGGE-KLAAGKTWTGKMKL 307
BLAST of NO04G02790 vs. NCBI_GenBank
Match: GAX16605.1 (hypothetical protein FisN_7Lh338 [Fistulifera solaris]) HSP 1 Score: 200.7 bits (509), Expect = 7.800e-48 Identity = 112/285 (39.30%), Postives = 163/285 (57.19%), Query Frame = 0 Query: 72 MAPAPRASATTMLAGKATLDTLDRVVLTDDATGHSATVHLHGGCITSY-KAPHEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQSMTEPEVTLVLKESAESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGKTPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKGPM--ALHDKARRVRTTVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEWVGEMKI 354 MA + + T +G T + V +G S+ V+L+G C+TSY + E + +R DA G+KPI+GGL CWPQFGPGAIQQHGFARN+ W V+ SMT+ V LV++ S ++++WD+ F+ TV L+ D + T++ +N G +DF +ALHSY++VS + K I G S +GK F++K + + + E YKG + L D V + KGW D ++W+P GN+ MGY +FVCVES PVT+ G WVG+M + Sbjct: 54 MAQVEKKAVTKSASGLQTNEGGLEYVQLVHPSGSSSKVYLYGACVTSYIQDGTEFIAVRPDAKMDGSKPISGGLSHCWPQFGPGAIQQHGFARNVIWSVA--SMTDSSVELVMEPSDYTKEMWDKPFKCTFTVTLQEDQLDTKMWVENKGDDSFDFQAALHSYFAVSSLDKLEISG-SFAGKEFLNKLVGD--GGEMQTEDREVITISEEYDRVYKGVIDPVLKDAGTGKSLAVLNTKGWADTVIWSPYGNEAMGYNNFVCVES-VKFDPVTLNSGETWVGDMSL 332
BLAST of NO04G02790 vs. NCBI_GenBank
Match: XP_002286728.1 (aldose-1-epimerase, partial [Thalassiosira pseudonana CCMP1335] >EED96369.1 aldose-1-epimerase, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 194.5 bits (493), Expect = 5.600e-46 Identity = 107/274 (39.05%), Postives = 157/274 (57.30%), Query Frame = 0 Query: 81 TTMLAGKATLDTLDRVVLTDDATGHSATVHLHGGCITSY-KAPHEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQSMTEPEVTLVLKESAESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGKTPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKGPMALHDKARRVRTTVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEWVGEMKI 354 T AG T D V +A G ++ ++L+GG +TSY K E + +R DA G+KPI+GGL CWPQFGPG IQQHGFARN+ W V +SM + L + S ++++WD+ F +V LE D + T++ +N G+ +DF +ALHSY++VS + +I G S +GK F++K + I++ + V P+ L DK +V + G+ D +LW P GN+GMGY +FVCVES PVT+ GG+ W G+M + Sbjct: 6 TASSAGLMTNDDGLEYVRLSNAAGDTSDIYLYGGVVTSYVKGGQEYIAVRPDAKMDGSKPISGGLSHCWPQFGPGEIQQHGFARNVNWTV--KSMDDTSCVLEMAPSDYTKEMWDKEFLCTFSVNLEDDQLSTKMFVENKGEESFDFQAALHSYFTVSALENLSIAG-SFAGKEFLNKMVGDGEMQTEERDVITISEEYDRVYTGVNDPV-LQDKGTGKSLSVLNTAGYEDTVLWNPYGNEGMGYNNFVCVES-VKFDPVTLAGGASWTGDMAL 274
BLAST of NO04G02790 vs. NCBI_GenBank
Match: XP_009039041.1 (hypothetical protein AURANDRAFT_4661, partial [Aureococcus anophagefferens] >EGB06166.1 hypothetical protein AURANDRAFT_4661, partial [Aureococcus anophagefferens]) HSP 1 Score: 193.0 bits (489), Expect = 1.600e-45 Identity = 106/254 (41.73%), Postives = 152/254 (59.84%), Query Frame = 0 Query: 97 VLTDDATGHSATVHLHGGCITSYK--APHEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPWEVSAQSMTEPEVTLVLKESAESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGK-TPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKGPMALHDKARRVRTTVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEW 348 V + +G SA ++G +TSYK + E + +R DA G+KPI+GGL C+PQFGPGAIQQHGFARN+ W++ + VT L SA +R++WD+ F + V L + T++T NTG +DF +ALHSY+ VSDI+ T+I G S GKTF+DK QDP + + + + V P+ L DK + T+++ GW D +LW+P G++GMGYK+F+CVES A PV++ G W Sbjct: 1 VALEHESGASAKAFVYGADVTSYKDASGTEWIAVRPDAKMDGSKPISGGLSHCFPQFGPGAIQQHGFARNVDWDIVKTEGS--SVTFRLAPSAYTREMWDEPFVVDFEVALSAASLDTKMTVTNTGSGDSFDFQAALHSYFDVSDINATSIAG-SFKGKTFLDKMQDPPKETKETRDVITVGEEYDRVYKGSNDPV-LKDKGKGKALTIDNKAGWKDTVLWSPYGDEGMGYKNFLCVESVAFD-PVSLAAGENW 249
BLAST of NO04G02790 vs. NCBI_GenBank
Match: XP_005834711.1 (hypothetical protein GUITHDRAFT_151947 [Guillardia theta CCMP2712] >EKX47731.1 hypothetical protein GUITHDRAFT_151947 [Guillardia theta CCMP2712]) HSP 1 Score: 192.6 bits (488), Expect = 2.100e-45 Identity = 109/315 (34.60%), Postives = 162/315 (51.43%), Query Frame = 0 Query: 53 LKRSLAFALVGVSVANAFFMAPAPRASATTMLAGKATLDTLDRVVLTDDATGHSATVHLHGGCITSYKAP-HEVLGIRADAVFTGAKPIAGGLQICWPQFGPGAIQQHGFARNLPW---EVSAQSMTEPEVTLVLKESA----------ESRKIWDQAFELYLTVRLEGDHMLTRLTAKNTGKTPWDFTSALHSYYSVSDISKTTIIGTSLSGKTFVDKTQDPFVSAPLPASEMGITKFLEGVIPDYKGPMALHDKARRVRTTVEHVKGWNDYILWAPVGNDGMGYKSFVCVESGAVSKPVTVEGGSEWVGEMKI 354 ++R A +V V + F+ A A M+ D V LT+ T +++ +G C+TSYK P ++V +R DAV G+KPI+GG+ IC+PQFGPG IQQHGFARN+ W +V ++ L+E + E+RK+W +F + L ++ L +N GK + FT ALH+Y++V DI K I G GK ++DKT P E+ I+ F E + D + L D + V + +GW D +W P G + MGYK+FVC+E G + +PV + G WV + I Sbjct: 49 IRRRKATGIVASFVPDKEFLKKQESAQADAMI-------LRDPVKLTNTITKEEVSIYKNGACVTSYKTPDYDVFFVRPDAVLDGSKPISGGVPICFPQFGPGEIQQHGFARNMKWVCVDVREENAAGSRSLSWLREGSRAIYELVPNNETRKMWPNSFNCRYQIDLNSGNLNLELRVQNKGKKAFSFTGALHTYFAVDDIDKIAIQG-GFKGKKYLDKTLSPPAEKTETEDELRISSFTERIYSDCTDDIRLKDGDKEV--VIRSSQGWKDIAIWNPYGEEKMGYKNFVCIEHGVICEPVVLNPGDVWVSSVDI 353 The following BLAST results are available for this feature:
BLAST of NO04G02790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02790 ID=NO04G02790|Name=NO04G02790|organism=Nannochloropsis oceanica|type=gene|length=1919bpback to top protein sequence of NO04G02790.1 >NO04G02790.1-protein ID=NO04G02790.1-protein|Name=NO04G02790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=359bpback to top Synonyms
Publications
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