NO04G02710, NO04G02710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02710 vs. NCBI_GenBank
Match: EWM28659.1 (uncharacterized protein Naga_100177g3 [Nannochloropsis gaditana]) HSP 1 Score: 296.6 bits (758), Expect = 1.000e-76 Identity = 142/155 (91.61%), Postives = 149/155 (96.13%), Query Frame = 0 Query: 1 MARFSRLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHAMGE 156 MARFSRLARELELLR DPPPGVAAW VDEA+LSRFHASI+GPESTPYAAGLFRLELEVS RYPFEPP VRFLTPVFHPNVDD GRICLDSLK QPQG+WTPSL+IPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFE+RAR+HTAQ+AMGE Sbjct: 3 MARFSRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGE 157
BLAST of NO04G02710 vs. NCBI_GenBank
Match: XP_012206095.1 (hypothetical protein SPRG_09951 [Saprolegnia parasitica CBS 223.65] >KDO23143.1 hypothetical protein SPRG_09951 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 192.2 bits (487), Expect = 2.700e-45 Identity = 89/151 (58.94%), Postives = 114/151 (75.50%), Query Frame = 0 Query: 5 SRLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHAMGE 156 SR+ +ELE+L TDPP G+ AW VD+ L A IQGPE TPY G+F LE++V RYPFEPPKV F TP+FHPN+D+ GRICLD+LK QP+GSW PS+++ TLLTT+RLL+A PN DDGL PE T LY+++ F +A++ TAQHA + Sbjct: 6 SRMRKELEMLETDPPHGICAWSVDD-KLDDLQAQIQGPEGTPYENGVFLLEIKVPERYPFEPPKVHFTTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLYKQNHALFVTKAKEMTAQHATAQ 155
BLAST of NO04G02710 vs. NCBI_GenBank
Match: GAY04289.1 (Hypothetical protein PINS_012110 [Pythium insidiosum]) HSP 1 Score: 192.2 bits (487), Expect = 2.700e-45 Identity = 86/148 (58.11%), Postives = 114/148 (77.03%), Query Frame = 0 Query: 5 SRLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHA 153 +R+ +E+E+L +DPP G++AW D+ L R A I GPE +PY G+F L++E+ RYPFEPPKVRF+TP++HPN+DD GRICLD+LK QP+GSW PS++I TLLTT+RLL+A PNADDGL PE T LY+ + F R+A + T QHA Sbjct: 6 ARMRKEIEMLESDPPYGISAWPKDD-QLDRLEAQILGPEGSPYDGGVFLLDIEIPERYPFEPPKVRFVTPIYHPNIDDAGRICLDTLKMQPKGSWMPSVNISTLLTTIRLLMAEPNADDGLMPEITDLYKHNRELFRRKAVEMTKQHA 152
BLAST of NO04G02710 vs. NCBI_GenBank
Match: OQR91306.1 (ubiquitin-conjugating enzyme E2 T-like [Thraustotheca clavata]) HSP 1 Score: 191.8 bits (486), Expect = 3.500e-45 Identity = 88/148 (59.46%), Postives = 113/148 (76.35%), Query Frame = 0 Query: 5 SRLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHA 153 SR+ +ELE+L DPP GV AW +DE L A IQGPE TPY G+F LE+++ RYPFEPPKV FLTP+FHPN+D+ GRICLD+LK QP+GSW PS+++ TLLTT+RLL+A PN DDGL PE T L++++ F +A++ TAQHA Sbjct: 6 SRMRKELEMLENDPPHGVCAWTIDE-KLDDLQAQIQGPEGTPYENGVFLLEIKIPERYPFEPPKVHFLTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLFKQNHALFVTKAKEMTAQHA 152
BLAST of NO04G02710 vs. NCBI_GenBank
Match: XP_008606419.1 (hypothetical protein SDRG_02601 [Saprolegnia diclina VS20] >EQC39945.1 hypothetical protein SDRG_02601 [Saprolegnia diclina VS20]) HSP 1 Score: 191.0 bits (484), Expect = 5.900e-45 Identity = 88/151 (58.28%), Postives = 114/151 (75.50%), Query Frame = 0 Query: 5 SRLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHAMGE 156 SR+ +ELE+L TDPP G+ AW VD+ L A IQGPE TPY G+F LE++V RYPFEPPKV F TP+FHPN+D+ GRICLD+LK QP+GSW PS+++ TLLTT+RLL+A PN DDGL PE T L++++ F +A++ TAQHA + Sbjct: 6 SRMRKELEMLETDPPHGICAWSVDD-KLDDLQAQIQGPEGTPYENGVFLLEIKVPERYPFEPPKVHFTTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLFKQNHELFVTKAKEMTAQHATAQ 155
BLAST of NO04G02710 vs. NCBI_GenBank
Match: CBJ32475.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 190.3 bits (482), Expect = 1.000e-44 Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = 0 Query: 6 RLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHA 153 RL +EL++L +PPPGV AW VD+ ++ A IQGPE TPY G F LEL++ RYPFEPPKVRF+TP++HPN+D GRICLD+LK +P GSW PS+++PTLLTT+RLL+AHPN DDGL P+ T L+ ++ F AR H +HA Sbjct: 8 RLGKELKMLTDEPPPGVCAWPVDDC-ITHLQAQIQGPEDTPYERGTFLLELKIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWAPSMNVPTLLTTIRLLMAHPNGDDGLMPDITELFLKNPSRFADVARAHVEEHA 153
BLAST of NO04G02710 vs. NCBI_GenBank
Match: OQR94341.1 (ubiquitin-conjugating enzyme E2T-like [Achlya hypogyna]) HSP 1 Score: 189.1 bits (479), Expect = 2.300e-44 Identity = 85/151 (56.29%), Postives = 114/151 (75.50%), Query Frame = 0 Query: 5 SRLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHAMGE 156 SR+ +ELE+L +DPP G+ AW VD+ L A IQGPE TPY G+F LE+++ RYPFEPPKV F+TP+FHPN+D+ GRICLD+LK QP+GSW PS+++ TLLTT+RLL+A PN DDGL PE T L++++ F +A++ T QHA + Sbjct: 6 SRMRKELEMLESDPPHGICAWSVDD-KLDDLQAQIQGPEGTPYENGVFLLEIKIPERYPFEPPKVHFITPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLFKQNHAHFVTKAKEMTTQHAKAQ 155
BLAST of NO04G02710 vs. NCBI_GenBank
Match: GAX97235.1 (Hypothetical protein PINS_005125 [Pythium insidiosum]) HSP 1 Score: 188.7 bits (478), Expect = 2.900e-44 Identity = 85/148 (57.43%), Postives = 112/148 (75.68%), Query Frame = 0 Query: 5 SRLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHA 153 +R+ +E+E+L +DPP G+ AW + L R A I GPE +PY G+F L++E+ RYPFEPPKVRF+TP++HPN+DD GRICLD+LK QP+GSW PS++I TLLTT+RLL+A PNADDGL PE T LY+ + F R+A + T QHA Sbjct: 6 ARMRKEIEMLESDPPYGIXAWPKXD-QLDRLEAQILGPEGSPYDGGVFLLDIEIPERYPFEPPKVRFVTPIYHPNIDDAGRICLDTLKMQPKGSWMPSVNISTLLTTIRLLMAEPNADDGLMPEITDLYKHNRELFRRKAVEMTKQHA 152
BLAST of NO04G02710 vs. NCBI_GenBank
Match: XP_024574333.1 (ubiquitin-conjugating enzyme e2 t-like [Plasmopara halstedii] >CEG37964.1 ubiquitin-conjugating enzyme e2 t-like [Plasmopara halstedii]) HSP 1 Score: 184.9 bits (468), Expect = 4.300e-43 Identity = 87/165 (52.73%), Postives = 116/165 (70.30%), Query Frame = 0 Query: 6 RLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHAMGEEGETTLPRGDMKTGE 171 R+ +E+ +L +DPP GV+AW D+ L R A I GPE +PY GLF LE+++ RYPFEPPKVRFLTP++HPN+DD GRICLD+LK QP+GSW PS++I TLLTT+RLL+A PNADDGL P+ +++ + F A + T QHA + T + D+K E Sbjct: 4 RMRKEIAMLESDPPFGVSAWPKDD-QLDRLEAQIMGPEGSPYERGLFNLEIDIPERYPFEPPKVRFLTPIYHPNIDDGGRICLDTLKMQPKGSWLPSVNICTLLTTIRLLMAEPNADDGLMPDIADIFKHNRELFNSNASEMTLQHACNLQAST--EKDDLKENE 165
BLAST of NO04G02710 vs. NCBI_GenBank
Match: OWZ09299.1 (Ubiquitin-conjugating enzyme E2 [Phytophthora megakarya]) HSP 1 Score: 183.3 bits (464), Expect = 1.200e-42 Identity = 84/174 (48.28%), Postives = 121/174 (69.54%), Query Frame = 0 Query: 6 RLARELELLRTDPPPGVAAWLVDEADLSRFHASIQGPESTPYAAGLFRLELEVSARYPFEPPKVRFLTPVFHPNVDDCGRICLDSLKPQPQGSWTPSLSIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFERRARDHTAQHAMGEEG-------ETTLPRGDMKTGEGK 173 R+ +E+ +L +DPP GV+AW D+ + R A I GP+ +PY G+F L++E+ RYPFEPPKV F+TP++HPN+DD GRICLD+LK QP+GSW PS++I TLLTT+RLL+A PNADDGL PE +++ + F ++A + T QHA + +TT G++K +G+ Sbjct: 7 RMRKEIAMLESDPPFGVSAWPKDD-QIDRLQAQILGPDGSPYEKGVFHLDIEIPERYPFEPPKVHFVTPIYHPNIDDAGRICLDTLKMQPKGSWLPSVNISTLLTTIRLLMAEPNADDGLMPEIADVFKHNRELFNKKATELTIQHAQDTKAHQRKSATDTTAGSGNLKDDDGE 179 The following BLAST results are available for this feature:
BLAST of NO04G02710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02710 ID=NO04G02710|Name=NO04G02710|organism=Nannochloropsis oceanica|type=gene|length=3459bpback to top protein sequence of NO04G02710.1 >NO04G02710.1-protein ID=NO04G02710.1-protein|Name=NO04G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=344bpback to top Synonyms
Publications
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