NO04G02690, NO04G02690 (gene) Nannochloropsis oceanica

Overview
NameNO04G02690
Unique NameNO04G02690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2090
Alignment locationchr4:714616..716705 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:714616..716705 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G02690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009549NSK009549Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02690.1NO04G02690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578833gene_2041Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02690.1NO04G02690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02690 ID=NO04G02690|Name=NO04G02690|organism=Nannochloropsis oceanica|type=gene|length=2090bp
GGGAGTTGAACATCGCAAGAGGAGGTTTTTGATGCCCCCTTCTGTTCCAC
TTCATGCAGATGGATATTTCGCCCTTAGATTGCATGTGAGCACTTCGAAC
GCCTTGAACCGCTCGCAAGGGAACATGGACTGAGGAATGGGAGATGCTTT
GTATCAGTGACAGAGCTGGGAGCAGTTGTACTCTGAAGTCGGAGGGCAGG
GCAGCTGTACCTCCTCGGCCCGGGACGCAATCTTCGTCCTTTTCAGAGCT
TTACTTGTCGAGAGAGAGCAAGCATTTATCTAATATGCGGCATCACGGTC
ACCCTCGCGCTTCGTTTACTCCGAATCATCCTCCTGACCCCCTTCCTTCT
CTCCAACACTTTGTCTCCTCCCCCCCCCTCGTTCACTTTAGCTACTTCAA
GCACATTTACCCTCATACCCTCAGCCTCGTTAGCCATGTCTGACTCCAAG
CTCTCCCGCAAGCTGAGCCGCACCTCCGATGAGCCTTATCTTTACGAGTC
CTACTCCAAGGATAGTGgtatgtggagtggtgggatgggtgggtggggta
gggcaaaaaggatgcgagcctgatggcggcagttattcgttctttttgat
atccaaggcactttgtatatcgcgtgcttgtgagcttgcatgcatcgaag
gcatgtatggcaaacattcatgtatttctgtgccttatgggagcaagaag
cgatttgccatgcgcatgcacccgtcaaaatgaccccctctttccacggt
ccccgaatacttttttcggaaatgtttttaagggccaccggcactccctc
tccctcacttacacccacacatcccaccgaccaccaaaatatagAGGAAG
GAAAATACACTAAGACAGACTGCCTGCGCTTGGCGAAGACCCTGACGGAT
CTGGCCCAGGTCCCCGCCCCATGCAAGGAAGTCGTCCAAAACGAGCAAGC
CATGCGTAAGGCCTTCGAGGGTGCCACTGTCACCGACCGAGCTCGCCACG
CAATTGCCACGCGTAAGGGCACGGTGTCTCACCACCAGCTACAACGGCGC
TTGACATCCACTTCTGAGACTATGGCCCGTTAATTTGGCCTCGTTCTGAC
ACTGTGCGTGTGGGAGTGCTTGTATGTTTGGTGTCTCGGTTGGTAAGGCG
AGAAAGAGAAAAAGAGAGAGACATCAAGAAGAAAATGTAAAACGCAGAGA
CCAGCAGAGTACGTGTGGCTGGTGTCTTCTTCTTTTTATAAATAACGGCA
GCAATGGCGGAAAGCGGAAAGTTACTGGAGGAAGGAATAAGAGCTACTTA
AAAATGCACCAGCACGCACCATGATCATGATCATCGTCGATAAGCATAGG
AGAGTGACGAAGGGCTGTCATGCCTTCCTTCCCCTCCCCCCCCCCCCCCC
CCACAAAACGAAAAAATCATTTTTTTAGAACAATGCAATCAAACAAGCGA
GTAAATGGAAGGCAAGAAACAAGAGATGACAAAAAGAGAGGAACAAGATA
TACAATATTCAAGAATAGGGGTCAGAGATGAAAAAAGCGAAAACAGTTCT
CAATCCAAAAAAAGTGCTTTTGAAAGCAGGTGAGCGTGTATGAGCGTGGC
TTCTTTTGGTGCATGGACAAGCGTAGAGGATCGGAAGGTTCTCGGCCGCC
CCCCTTCCCCCTTTTACCACCTCGCCACATTTTTTCCAGCAGAAATTGGC
CCTTCATACTGTCTCTTAGATTCCTGCTTGTACATGCTGTTACCTAGATA
GAAAGCTACAGGCAGAGGATGGTTTGAAGACGAAGAAGGGAGAGACTTCC
TAAAGCCATTTACCTTAAGAGAAGGGAAAGAGAACAAAGGAGCAAACCAC
AAGAATGCGGCGAAGATAAAAACCAAGAATCAGCAATCTGAGGGAGGAAG
AAAGAGAGGCATGTTTTGTTTGTTTGAGGGTGTGTGTGGTGTTCAGGTGC
ATGCGTGCATGAATATTTGTGTGTGCGTGTATTCAAGGTGGACGTAAAGA
ACCGCACGTCGTCTTTGTCGTAGTGGATCGACAACTTTCAAACGGAGAAG
GATATGAGTGAGGGAAAAGAAATGATAAGAAGACGAATTC
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protein sequence of NO04G02690.1

>NO04G02690.1-protein ID=NO04G02690.1-protein|Name=NO04G02690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=107bp
MSDSKLSRKLSRTSDEPYLYESYSKDSEEGKYTKTDCLRLAKTLTDLAQV
PAPCKEVVQNEQAMRKAFEGATVTDRARHAIATRKGTVSHHQLQRRLTST
SETMAR*
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Synonyms
Publications