NO04G02590, NO04G02590 (gene) Nannochloropsis oceanica

Overview
NameNO04G02590
Unique NameNO04G02590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1623
Alignment locationchr4:691413..693035 +

Link to JBrowse

Properties
Property NameValue
DescriptionCap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:691413..693035 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0080009mRNA methylation
GO:00063707-methylguanosine mRNA capping
GO:0032259methylation
GO:0080009mRNA methylation
GO:0032259methylation
GO:00063707-methylguanosine mRNA capping
Vocabulary: Molecular Function
TermDefinition
GO:0004483mRNA (nucleoside-2'-O-)-methyltransferase activity
GO:0008168methyltransferase activity
GO:0008168methyltransferase activity
GO:0004483mRNA (nucleoside-2'-O-)-methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR030376Cap_mRNA_MeTrfase_1
IPR002877rRNA_MeTrfase_FtsJ_dom
Homology
BLAST of NO04G02590 vs. NCBI_GenBank
Match: EWM28648.1 (hypothetical protein Naga_100177g20 [Nannochloropsis gaditana])

HSP 1 Score: 395.2 bits (1014), Expect = 3.300e-106
Identity = 232/486 (47.74%), Postives = 281/486 (57.82%), Query Frame = 0
Query:    1 MNQEPPPPRQIHCVLGPADFVQLRSSLILDIDQNGVVWVSLPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPILTSPFSTHAAPSPTEAHTLGLYDRELLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTAL----SPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENCDCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMA----RTLRFCYGQDRRGDLCRPENIQYLRAFLPGRVDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQ-----NKEVALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAWLRIVNNSLMRAQIKACYAIHEKL 474
            M  + P   Q+ C   P+DF+ L     + ID +G +W+S                                       +   +SP      PS        +YDR   CELMDLRSSF+ VPR+R+SAAR  SN YE L     NPFLNRSALKLANI+ I+PL PV L S  +    S  + TF+DLCGGPGGFSEYLLRRQ    EVHGWGMTL +C C WDR KL +WIV+E+                     SKRRK   A+A    R L   YG D  GDLC+P+N+Q+L   +  RVDVVVADGGFA AR RFDQEA MLPLL+SE SAM   L+  G FVCKFFD+TLP TVQL+ LL LLFE V +VKPV SRPASSERY LG+GFRG   E  +      ++  +LL +M A   AGQT G   +  E G +  + TS+   LA GS F AWLR VN+ LMR+Q++ACYAIH +L
Sbjct:    1 MYAKQPTVCQLRCPFTPSDFIALSDFPEIGIDGSGALWIS-------------------------------KLLESASRLAAPSSPGIGAKKPSQASRADDDVYDRNSFCELMDLRSSFNAVPRARFSAARSASNMYEPLGTAAQNPFLNRSALKLANIDAIIPLKPV-LVSQGMDVEDSLPTFTFLDLCGGPGGFSEYLLRRQDLVKEVHGWGMTLCDCKCGWDRGKLGEWIVDENKKNARTFESTPNEDHQSGIFPSKRRKCMSALASLQTRALHLVYGSDGSGDLCQPDNVQFLADSMAVRVDVVVADGGFAGARGRFDQEAAMLPLLISEASAMVQTLQPKGCFVCKFFDMTLPGTVQLVALLALLFERVTVVKPVMSRPASSERYFLGQGFRGFDEEESKEGAVSTRQARVLLNEMLALATAGQTCGTPVDGGEGGGQ-ALITSMRQALARGSPFVAWLRAVNDKLMRSQVEACYAIHARL 453          
BLAST of NO04G02590 vs. NCBI_GenBank
Match: XP_005856160.1 (cap-specific mrna (nucleoside-2 -o-)-methyltransferase 1, partial [Nannochloropsis gaditana CCMP526] >EKU20199.1 cap-specific mrna (nucleoside-2 -o-)-methyltransferase 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 341.3 bits (874), Expect = 5.600e-90
Identity = 197/402 (49.00%), Postives = 236/402 (58.71%), Query Frame = 0
Query:   10 QIHCVLGPADFVQLRSSLILDIDQNGVVWVSLPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPILTSPFSTHAAPSPTEAHTLGLYDRELLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTAL----SPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENCDCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMA----RTLRFCYGQDRRGDLCRPENIQYLRAFLPGRVDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKEVAL 404
            Q+ C   P+DF+ L     + ID +G +W+S                                       +   +SP      PS        +Y+R   CELMDLRSSF+ VPR+R+SAAR  SN YE L     NPFLNRSALKLANI+ I+PL PV L S  +    S  + TF+DLCGGPGGFSEYLLRRQ    EVHGWGMTL +C C WDR KL +WIV+E+                     SKRRK   A+A    R L   YG D  GDLC+P+N+Q+L   +  RVDVVVADGGFA AR RFDQEA MLPLL+SE SAM   L+  G FVCKFFD+TLP TVQL+ LL LLFE V +VKPV SRPASSERY LG+GFR  G + E++KE A+
Sbjct:    2 QLRCPFTPSDFIALSDFPEIGIDGSGALWIS-------------------------------KLLESASRLAAPSSPGIGAKKPSQASRADNDVYNRNSFCELMDLRSSFNAVPRARFSAARSASNMYEPLGTAAQNPFLNRSALKLANIDAIIPLKPV-LVSQGMDVEDSLPTFTFLDLCGGPGGFSEYLLRRQDLVKEVHGWGMTLCDCKCGWDRGKLGEWIVDENKKNARTFESTPNEDHQSGIFPSKRRKCMSALASLQTRALHLVYGSDGSGDLCQPDNVQFLADSMAVRVDVVVADGGFAGARGRFDQEAAMLPLLISEASAMVQTLQPKGCFVCKFFDMTLPGTVQLVALLALLFERVTVVKPVMSRPASSERYFLGQGFR--GFDEEESKEGAV 369          
BLAST of NO04G02590 vs. NCBI_GenBank
Match: ETL83755.1 (hypothetical protein L917_16348 [Phytophthora parasitica])

HSP 1 Score: 180.6 bits (457), Expect = 1.300e-41
Identity = 124/370 (33.51%), Postives = 186/370 (50.27%), Query Frame = 0
Query:  108 LLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTALSPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENC--DCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMARTLRFCYGQDRRGDLCRPENIQYLRAFLPGR----VDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKEVALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAWLRIVNNSLMRAQIKACYAIHE 472
            LL EL   ++ FD +   ++ +AR  +N +E L K   + FLNRSA+KL  ++ I   T         +    TF D+CGGPGGFSEYLL R   +++ HG+G+TL+    +C W                                      +           CYG+D  GDL    NI   R  + GR    VD+ VADGGF +AR++ +QE+MM  L+++EV AMF +LR GG FVCK F++  PA ++L  +L   FE  A+VKP+TSRPASSERY++ RG R     +   K V +L  ++   VQA   +  + +      +  +   +         F  ++++ N ++ R+QI+AC  I+E
Sbjct:   91 LLQELEKEKNKFDELESPQFRSARAATNAFELLGK---HRFLNRSAMKLVTLDHIFQWTHG-------AGERFTFADICGGPGGFSEYLLWRTQQSSDTHGYGITLKGAANECDW--------------------------------------RLPSRFHDMFTICYGEDGTGDLYSIANIHNFRDVVRGRHPNGVDLAVADGGFLDARSKSNQESMMTRLILAEVLAMFAVLRVGGDFVCKTFELVTPAMLELCWILHQCFERFAVVKPITSRPASSERYIVARGLR---AGHPTTKLVEILEGRL---VQANNNENSNSQLHFLQEQTPLCEDVD--------FLQYMKVTNEAIARSQIEACRRINE 398          
BLAST of NO04G02590 vs. NCBI_GenBank
Match: ETP34818.1 (hypothetical protein F442_16954 [Phytophthora parasitica P10297])

HSP 1 Score: 180.3 bits (456), Expect = 1.600e-41
Identity = 124/370 (33.51%), Postives = 179/370 (48.38%), Query Frame = 0
Query:  108 LLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTALSPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENC--DCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMARTLRFCYGQDRRGDLCRPENIQYLRAFLPGR----VDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKEVALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAWLRIVNNSLMRAQIKACYAIHE 472
            LL EL   ++ FD +   ++ +AR  +N +E L K   + FLNRSA+KL  ++ I   T         +    TF D+CGGPGGFSEYLL R   +++ HG+G+TL+    +C W                                      +           CYG+D  GDL    NI   R  + GR    VD+ VADGGF +AR++ +QE+MM  L+++EV AMF +LR GG FVCK F++  PA ++L  +L   FE  A+VKP+TSRPASSERY++ RG R              L+E +  R+       +     E  N           L     F  ++++ N  + R+QI+AC  I+E
Sbjct:   92 LLQELEKEKNKFDELESPQFRSARAATNAFELLGK---HRFLNRSAMKLVTLDHIFQWTHG-------AGERFTFADICGGPGGFSEYLLWRTQQSSDTHGYGITLKGAANECDW--------------------------------------RLPSRFHDMFTICYGEDGTGDLYSIANIHNFRDVVRGRHPNGVDLAVADGGFLDARSKSNQESMMTRLILAEVLAMFAVLRVGGDFVCKTFELVTPAMLELCWILHQCFERFAVVKPITSRPASSERYIVARGLRA-------GHPTTKLVEVLEGRL-------VQANNNENSNSQLHFLQEQTPLCEDVDFLQYMKVTNEVIARSQIEACSRINE 399          
BLAST of NO04G02590 vs. NCBI_GenBank
Match: ETK77101.1 (hypothetical protein L915_16622 [Phytophthora parasitica] >ETL30535.1 hypothetical protein L916_16526 [Phytophthora parasitica])

HSP 1 Score: 179.5 bits (454), Expect = 2.800e-41
Identity = 126/370 (34.05%), Postives = 183/370 (49.46%), Query Frame = 0
Query:  108 LLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTALSPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENC--DCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMARTLRFCYGQDRRGDLCRPENIQYLRAFLPGR----VDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKEVALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAWLRIVNNSLMRAQIKACYAIHE 472
            LL EL   ++ FD +   ++ +AR  +N +E L K   + FLNRSA+KL  ++ I   T         +    TF D+CGGPGGFSEYLL R   +++ HG+G+TL+    +C W                                      +           CYG+D  GDL    NI   R  + GR    VD+ +ADGGF +AR++ +QE+MM  L+++EV AMF +LR GG FVCK F++  PA ++L  +L   FE  A+VKP+TSRPASSERY++ RG R     +   K V +L  ++   VQA   +       E  N           L     F  ++++ N  + R+QI+AC  I+E
Sbjct:   91 LLQELEKEKNKFDELESPQFRSARAATNAFELLGK---HRFLNRSAMKLVTLDHIFQWTHG-------AGERFTFADICGGPGGFSEYLLWRTQQSSDTHGYGITLKGAANECDW--------------------------------------RLPSRFHDMFTICYGEDGTGDLYSIANIHNFRDVVRGRHPNGVDLALADGGFLDARSKSNQESMMTRLILAEVLAMFAVLRVGGDFVCKTFELVTPAMLELCWILHQCFERFAVVKPITSRPASSERYIVARGLR---AGHPTTKLVEILEGRL---VQANNNN-------ENSNSQLHFLQEQTPLCEDVDFLQYMKVTNEVIARSQIEACRRINE 399          
BLAST of NO04G02590 vs. NCBI_GenBank
Match: ETM36952.1 (hypothetical protein L914_16455 [Phytophthora parasitica])

HSP 1 Score: 179.5 bits (454), Expect = 2.800e-41
Identity = 126/370 (34.05%), Postives = 183/370 (49.46%), Query Frame = 0
Query:  108 LLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTALSPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENC--DCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMARTLRFCYGQDRRGDLCRPENIQYLRAFLPGR----VDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKEVALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAWLRIVNNSLMRAQIKACYAIHE 472
            LL EL   ++ FD +   ++ +AR  +N +E L K   + FLNRSA+KL  ++ I   T         +    TF D+CGGPGGFSEYLL R   +++ HG+G+TL+    +C W                                      +           CYG+D  GDL    NI   R  + GR    VD+ +ADGGF +AR++ +QE+MM  L+++EV AMF +LR GG FVCK F++  PA ++L  +L   FE  A+VKP+TSRPASSERY++ RG R     +   K V +L  ++   VQA   +       E  N           L     F  ++++ N  + R+QI+AC  I+E
Sbjct:   91 LLQELEKEKNKFDELESPQFRSARAATNAFELLGK---HRFLNRSAMKLVTLDHIFQWTHG-------AGERFTFADICGGPGGFSEYLLWRTQQSSDTHGYGITLKGAANECDW--------------------------------------RLPSRFHDMFTICYGEDGTGDLYSIANIHNFRDVVRGRHPNGVDLALADGGFLDARSKSNQESMMTRLILAEVLAMFAVLRVGGDFVCKTFELVTPAMLELCWILHQCFERFAVVKPITSRPASSERYIVARGLR---AGHPTTKLVEILEGRL---VQANNNN-------ENSNSQLHFLQEQTPLCEDVDFLQYMKVTNEVIARSQIEACRRINE 399          
BLAST of NO04G02590 vs. NCBI_GenBank
Match: ETO65582.1 (hypothetical protein F444_17126 [Phytophthora parasitica P1976])

HSP 1 Score: 179.5 bits (454), Expect = 2.800e-41
Identity = 123/370 (33.24%), Postives = 186/370 (50.27%), Query Frame = 0
Query:  108 LLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTALSPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENC--DCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMARTLRFCYGQDRRGDLCRPENIQYLRAFLPGR----VDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKEVALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAWLRIVNNSLMRAQIKACYAIHE 472
            LL EL   ++ FD +   ++ +AR  +N +E L K   + FLNRSA+KL  ++ I   T         +    TF D+CGGPGGFSEYLL R   +++ HG+G+TL+    +C W                                      +           CYG+D  GDL    NI   R  + GR    VD+ +ADGGF +AR++ +QE+MM  L+++EV AMF +LR GG FVCK F++  PA ++L  +L   FE  A+VKP+TSRPASSERY++ RG R     +   K V +L  ++   VQA   +  + +      +  +   +         F  ++++ N ++ R+QI+AC  I+E
Sbjct:   91 LLQELEKEKNKFDELESPQFRSARAATNAFELLGK---HRFLNRSAMKLVTLDHIFQWTHG-------AGERFTFADICGGPGGFSEYLLWRTQQSSDTHGYGITLKGAANECDW--------------------------------------RLPSRFHDMFTICYGEDGTGDLYSIANIHNFRDVVRGRHPNGVDLALADGGFLDARSKSNQESMMTRLILAEVLAMFAVLRVGGDFVCKTFELVTPAMLELCWILHQCFERFAVVKPITSRPASSERYIVARGLR---AGHPTTKLVEILEGRL---VQANNNENSNSQLHFLQEQTPLCEDVD--------FLQYMKVTNEAIARSQIEACRRINE 398          
BLAST of NO04G02590 vs. NCBI_GenBank
Match: ETP06690.1 (hypothetical protein F441_16956 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 179.1 bits (453), Expect = 3.700e-41
Identity = 123/370 (33.24%), Postives = 179/370 (48.38%), Query Frame = 0
Query:  108 LLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTALSPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENC--DCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMARTLRFCYGQDRRGDLCRPENIQYLRAFLPGR----VDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKEVALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAWLRIVNNSLMRAQIKACYAIHE 472
            LL EL   ++ FD +   ++ +AR  +N +E L K   + FLNRSA+KL  ++ I   T         +    TF D+CGGPGGFSEYLL R   +++ HG+G+TL+    +C W                                      +           CYG+D  GDL    NI   R  + GR    VD+ +ADGGF +AR++ +QE+MM  L+++EV AMF +LR GG FVCK F++  PA ++L  +L   FE  A+VKP+TSRPASSERY++ RG R              L+E +  R+       +     E  N           L     F  ++++ N  + R+QI+AC  I+E
Sbjct:   91 LLQELEKEKNKFDELESPQFRSARAATNAFELLGK---HRFLNRSAMKLVTLDHIFQWTHG-------AGERFTFADICGGPGGFSEYLLWRTQQSSDTHGYGITLKGAANECDW--------------------------------------RLPSRFHDMFTICYGEDGTGDLYSIANIHNFRDVVRGRHPNGVDLALADGGFLDARSKSNQESMMTRLILAEVLAMFAVLRVGGDFVCKTFELVTPAMLELCWILHQCFERFAVVKPITSRPASSERYIVARGLRA-------GHPTTKLVEVLEGRL-------VQANNNENSNSQLHFLQEQTPLCEDVDFLQYMKVTNEVIARSQIEACRRINE 398          
BLAST of NO04G02590 vs. NCBI_GenBank
Match: ETI36838.1 (hypothetical protein F443_17096 [Phytophthora parasitica P1569])

HSP 1 Score: 178.3 bits (451), Expect = 6.300e-41
Identity = 126/370 (34.05%), Postives = 182/370 (49.19%), Query Frame = 0
Query:  108 LLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTALSPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENC--DCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMARTLRFCYGQDRRGDLCRPENIQYLRAFLPGR----VDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKEVALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAWLRIVNNSLMRAQIKACYAIHE 472
            LL EL   ++ FD +   ++ +AR  +N +E L K   + FLNRSA+KL  ++ I   T         +    TF D+CGGPGGFSEYLL R   + + HG+G+TL+    +C W                                      +           CYG+D  GDL    NI   R  + GR    VD+ +ADGGF +AR++ +QE+MM  L+++EV AMF +LR GG FVCK F++  PA ++L  +L   FE  A+VKP+TSRPASSERY++ RG R     +   K V +L  ++   VQA   +       E  N           L     F  ++++ N  + R+QI+AC  I+E
Sbjct:   91 LLQELEKEKNKFDELESPQFRSARAATNAFELLGK---HRFLNRSAMKLVTLDHIFQWTHG-------AGERFTFADICGGPGGFSEYLLWRTQQSNDTHGYGITLKGAANECDW--------------------------------------RLPSRFHDMFTICYGEDGTGDLYSIANIHNFRDVVRGRHPNGVDLALADGGFLDARSKSNQESMMTRLILAEVLAMFAVLRVGGDFVCKTFELVTPAMLELCWILHQCFERFAVVKPITSRPASSERYIVARGLR---AGHPTTKLVEILEGRL---VQANNNN-------ENSNSQLHFLQEQTPLCEDVDFLQYMKVTNEVIARSQIEACRRINE 399          
BLAST of NO04G02590 vs. NCBI_GenBank
Match: XP_008912415.1 (hypothetical protein PPTG_16593 [Phytophthora parasitica INRA-310] >ETN02378.1 hypothetical protein PPTG_16593 [Phytophthora parasitica INRA-310])

HSP 1 Score: 177.2 bits (448), Expect = 1.400e-40
Identity = 122/370 (32.97%), Postives = 185/370 (50.00%), Query Frame = 0
Query:  108 LLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLNRSALKLANINMIMPLTPVSLPSTALSPVSMTFVDLCGGPGGFSEYLLRRQGPAAEVHGWGMTLENC--DCPWDRHKLADWIVEEDXXXXXXXXXXXXXXXXXXAPASKRRKTAPAMARTLRFCYGQDRRGDLCRPENIQYLRAFLPGR----VDVVVADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLPATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKEVALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAWLRIVNNSLMRAQIKACYAIHE 472
            LL EL   ++ FD +   ++ +AR  +N +E L K   + FLNRSA+KL  ++ I   T         +    TF D+CGGPGGFSEYLL R   +++ HG+G+TL+    +C W                                      +           CYG+D  GDL    NI   R  + GR    VD+ +ADGGF +AR++ +QE+MM  L+++EV AMF +LR GG FVCK F++  P+ ++L  +L   FE  A+VKP+TSRPASSERY++ RG R     +   K V +L  ++   VQA   +  + +      +  +   +         F  ++++ N  + R+QI+AC  I+E
Sbjct:   91 LLQELEKEKNKFDELESPQFRSARAATNAFELLGK---HRFLNRSAMKLVTLDHIFQWTHG-------AGERFTFADICGGPGGFSEYLLWRTQQSSDTHGYGITLKGAANECDW--------------------------------------RLPSRFHDMFTICYGEDGTGDLYSIANIHNFRDVVRGRHPNGVDLALADGGFLDARSKSNQESMMTRLILAEVLAMFAVLRVGGDFVCKTFELVTPSMLELCWILHQCFERFAVVKPITSRPASSERYIVARGLR---AGHPTTKLVEILEGRL---VQANNNENSNSQLHFLQEQTPLCEDVD--------FLQYMKVTNEVIARSQIEACRRINE 398          
The following BLAST results are available for this feature:
BLAST of NO04G02590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28648.13.300e-10647.74hypothetical protein Naga_100177g20 [Nannochlorops... [more]
XP_005856160.15.600e-9049.00cap-specific mrna (nucleoside-2 -o-)-methyltransfe... [more]
ETL83755.11.300e-4133.51hypothetical protein L917_16348 [Phytophthora para... [more]
ETP34818.11.600e-4133.51hypothetical protein F442_16954 [Phytophthora para... [more]
ETK77101.12.800e-4134.05hypothetical protein L915_16622 [Phytophthora para... [more]
ETM36952.12.800e-4134.05hypothetical protein L914_16455 [Phytophthora para... [more]
ETO65582.12.800e-4133.24hypothetical protein F444_17126 [Phytophthora para... [more]
ETP06690.13.700e-4133.24hypothetical protein F441_16956 [Phytophthora para... [more]
ETI36838.16.300e-4134.05hypothetical protein F443_17096 [Phytophthora para... [more]
XP_008912415.11.400e-4032.97hypothetical protein PPTG_16593 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009559NSK009559Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02590.1NO04G02590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100177g20gene1949Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02590.1NO04G02590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02590 ID=NO04G02590|Name=NO04G02590|organism=Nannochloropsis oceanica|type=gene|length=1623bp
ATGAATCAAGAGCCACCACCACCCCGCCAGATTCATTGCGTTCTGGGCCC
CGCCGATTTTGTGCAATTGCGCTCGTCGCTCATCCTCGACATCGATCAAA
ACGGCGTGGTCTGGGTGTCCTTGCCGTCACCAGCAGCAGCAGCAGCAGCA
GCAAAAACAGCAGCAGCAGTGGCAGCAACAACATCTACAAAGCCAACTAC
TACTACTTCTTCCACATCTACTACCATATCAACGACAATACCCATATTGA
CCTCCCCATTCTCGACACATGCTGCTCCATCTCCGACAGAGGCACACACA
TTAGGGTTGTACGACAGAGAATTGCTGTGTGAATTGATGGATCTGCGCTC
CTCCTTTGACGTAGTACCTCGCTCTCGCTACTCGGCTGCCCGCTGGGAAA
GCAACCAGTACGAATGCCTCAGCAAGCCAGGTTGTAACCCATTTTTGAAT
CGCTCTGCCCTAAAGCTTGCCAATATAAATATGATTATGCCTTTGACACC
GGTCTCACTCCCTTCGACCGCTTTGTCACCTGTATCAATGACCTTTGTAG
ACTTATGTGGTGGACCTGGTGGCTTTTCCGAGTACTTATTACGACGCCAG
GGTCCTGCAGCAGAGGTGCATGGCTGGGGCATGACCTTAGAAAACTGCGA
CTGTCCATGGGATCGACATAAATTGGCAGATTGGATCGTGGAAGAGGATG
AGGAGGGCGAAAGCGAGAAGGACGAGGATAAGGACGAGAATGGCGACAAC
CATGCACCTGCTAGCAAACGGCGGAAGACAGCGCCGGCAATGGCACGGAC
TTTGCGCTTCTGCTATGGCCAAGACAGGCGAGGCGATCTCTGTCGGCCCG
AGAACATCCAGTATCTTCGTGCTTTCCTGCCGGGGAGGGTCGACGTGGTT
GTAGCCGACGGGGGATTCGCGGAAGCCCGGGCTCGCTTTGATCAAGAAGC
GATGATGTTGCCTTTATTGGTTAGTGAGGTCTCTGCCATGTTCTATATTC
TGAGAAAAGGCGGGTTATTTGTGTGTAAATTCTTTGATGTGACCTTGCCA
GCGACTGTGCAGTTGATTGGACTGTTGGGATTATTGTTTGAGAGCGTGGC
GATCGTGAAGCCGGTGACAAGCCGACCAGCGAGTTCGGAGAGGTACGTTT
TGGGGCGAGGATTCAGAGGAGAAGGAGGAGAAAACGAGCAAAACAAAGAG
GTTGCGCTGCTGCTTGAGAAGATGTTTGCACGGGTGCAGGCAGGGCAGAC
GGATGGGTTGTCGGAGGAGGAGGAGGAGGAAGGGAATGAGGGAGGGGTGG
CGACGTCCTTGGGGAACTTATTGGCCCCTGGGTCGGCTTTCGCTGCTTGG
CTGCGGATTGTAAATAATAGCTTAATGCGTGCACAGATTAAGGCTTGTTA
TGCTATTCACGAGAAATTAAACACGAAGGATGAGGAAGAGGAGGAGGAAG
TGCAACGAGAAGGAGATGTAGTTGTGGGGTGTCAAGAAAAGGAGGAGCAG
AAGCAGGAGCAGGAGCAGAAGGAGCAGGAAACGGAAAAAGAGACAAAGAA
GAGAGAGAAGGAAAAGGAGACAATGGACATGGAGGCATATCGACGGTTGT
GGGACTTGGACAGAATTCTCTAA
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protein sequence of NO04G02590.1

>NO04G02590.1-protein ID=NO04G02590.1-protein|Name=NO04G02590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=541bp
MNQEPPPPRQIHCVLGPADFVQLRSSLILDIDQNGVVWVSLPSPAAAAAA
AKTAAAVAATTSTKPTTTTSSTSTTISTTIPILTSPFSTHAAPSPTEAHT
LGLYDRELLCELMDLRSSFDVVPRSRYSAARWESNQYECLSKPGCNPFLN
RSALKLANINMIMPLTPVSLPSTALSPVSMTFVDLCGGPGGFSEYLLRRQ
GPAAEVHGWGMTLENCDCPWDRHKLADWIVEEDEEGESEKDEDKDENGDN
HAPASKRRKTAPAMARTLRFCYGQDRRGDLCRPENIQYLRAFLPGRVDVV
VADGGFAEARARFDQEAMMLPLLVSEVSAMFYILRKGGLFVCKFFDVTLP
ATVQLIGLLGLLFESVAIVKPVTSRPASSERYVLGRGFRGEGGENEQNKE
VALLLEKMFARVQAGQTDGLSEEEEEEGNEGGVATSLGNLLAPGSAFAAW
LRIVNNSLMRAQIKACYAIHEKLNTKDEEEEEEVQREGDVVVGCQEKEEQ
KQEQEQKEQETEKETKKREKEKETMDMEAYRRLWDLDRIL*
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Synonyms
Publications