NO04G02530, NO04G02530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02530 vs. NCBI_GenBank
Match: EWM28629.1 (fkbp-type peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 275.0 bits (702), Expect = 2.100e-70 Identity = 148/209 (70.81%), Postives = 163/209 (77.99%), Query Frame = 0 Query: 24 LCFTLLCCSVLPSMAYLMPFMKA--PSCNPSSSGKNTIARRDAVAGTGMMAALILAVGGGTATAFGLPLGASAEE-PVKVRKVNPNKIRETANGVKYFDVKVGEGASPREGNYVIITYIGQLSDGTIFDGLHGPGKKPLAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCTDKGECLVPPNSNVKYDMTLKRVAVSPI 230 LC LL + + AY++P M S + K RR+AV TGM+ A+ LA GG TAT PL AEE PVKVRKVNPNKIRET NGVKY DVKVGEG SPR G+YVIITYIGQLSDGTIFDGLHGPGKKPLAFK+GAKQVIPGLEEALL MQ GGERQ LVPA+LAFGEKGVCT+KGECLVPPN+NVKY++ LKRVAVSPI Sbjct: 9 LCSNLLLLVI--TTAYVVPSMTTTPTSWARYAKEKGVAVRREAVGFTGMLGAVALATGGSTATTLAWPLQVLAEESPVKVRKVNPNKIRETPNGVKYVDVKVGEGESPRGGDYVIITYIGQLSDGTIFDGLHGPGKKPLAFKIGAKQVIPGLEEALLSMQAGGERQLLVPADLAFGEKGVCTEKGECLVPPNTNVKYNVILKRVAVSPI 215
BLAST of NO04G02530 vs. NCBI_GenBank
Match: XP_005539439.1 (similar to FKBP-type peptidyl-prolyl cis-trans isomerase [Cyanidioschyzon merolae strain 10D] >BAM83403.1 similar to FKBP-type peptidyl-prolyl cis-trans isomerase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 143.7 bits (361), Expect = 7.300e-31 Identity = 67/138 (48.55%), Postives = 94/138 (68.12%), Query Frame = 0 Query: 91 GASAEEPVKVRKVNPNKIRETANGVKYFDVKVGEGASPREGNYVIITYIGQLSDGTIFDGLHGPGKKPLAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCTDKGECLVPPNSNVKYDMTLKRVAVSP 229 GA A +K++ +K +GV Y D K G GASP++G+ V+I YIG LSDGTIFD G+KPLAF G KQ++PG+E+ + M+ GG+R+ +VP+EL FGE+GVC + CLVPPN + YD+ L RV+++P Sbjct: 86 GARAAGTTTPQKLDLSKFVRDPSGVLYRDYKEGTGASPKDGDLVVINYIGYLSDGTIFDNTTAKGRKPLAFIFGKKQMVPGVEKGIETMKTGGKRRIIVPSELGFGERGVCIEGQGCLVPPNETLTYDVELMRVSIAP 223
BLAST of NO04G02530 vs. NCBI_GenBank
Match: CBJ48478.1 (FK506-binding protein 1 [Ectocarpus siliculosus]) HSP 1 Score: 133.7 bits (335), Expect = 7.500e-28 Identity = 79/186 (42.47%), Postives = 106/186 (56.99%), Query Frame = 0 Query: 44 MKAPSCNPSSSGKNTIARRDAVAGTGMMAALILAVGGGTATAFGLPLGASAEEPVKVRKVNPN-KIRETANGVKYFDVKVGEGASPREGNYVIITYIGQLSDGTIFDGLHGPGKKPLAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCTDKGECLVPPNSNVKYDMTLKRVAVSP 229 M A S P G RRD + AV G A+A LP GA A K PN ++ T GVK+ +K G G R+G++ ++ + G L DG +FD + PG+KP+AF+LG +QVI G EE L M G E Q +VPA +AFG+KG+C D G+CLV P +V+YD+ LKRVA +P Sbjct: 1 MAASSPRPGLDG----TRRDVIQTAS------AAVAGLLASAV-LPAGALA-----AAKAEPNRRVFTTDGGVKFIVLKEGTGPVARDGDFCVVEFTGFLPDGAVFDASNAPGRKPIAFQLGKRQVIKGWEEVLRLMNAGAEVQMVVPANMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAPTP 170
BLAST of NO04G02530 vs. NCBI_GenBank
Match: OSX68862.1 (hypothetical protein BU14_2157s0001, partial [Porphyra umbilicalis]) HSP 1 Score: 127.5 bits (319), Expect = 5.400e-26 Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = 0 Query: 130 EGNYVIITYIGQLSDGTIFDGLHGPGKKPLAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCT-DKG-ECLVPPNSNVKYDMTLKRVAVSPI 230 EG+ VI+ YIG L+DG +FD PG+KPLA ++G VIPGLEEA+LGMQ GG+R +VP L +GE+GVC D G +CLVPPNS ++YD+TL+RV+ SPI Sbjct: 1 EGDLVIVDYIGYLADGRVFDSSSSPGRKPLAIQIGKNTVIPGLEEAVLGMQQGGQRIVIVPPALGYGERGVCLGDAGSDCLVPPNSVIEYDLTLRRVSPSPI 102
BLAST of NO04G02530 vs. NCBI_GenBank
Match: XP_005716850.1 (unnamed protein product [Chondrus crispus] >CDF37031.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 122.5 bits (306), Expect = 1.700e-24 Identity = 73/185 (39.46%), Postives = 103/185 (55.68%), Query Frame = 0 Query: 48 SCNPSSSGKNTIARRDAVAGTGMMAALILAVGGGTATAFGLPLG---ASAEEPVKVRKVNPNKIRETANGVKYFDVKVGEGASPREGNYVIITYIGQLSDGTIFDGLHGPGKKPLAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCT-DKGECLVPPNSNVKYDMTLKRVAVSP 229 SC PS + T +RR LA+G AT P G A+A P ++ +G+ Y+DVK G GA P G++V+I Y LS+G IFD +K F++G +QVIPGLE A+ M+PGGER+ ++P LA+G++GVC + ECLVPP + Y + L+RVA+SP Sbjct: 177 SCPPSMNSAPTFSRRQVSR---------LALGALLATTVLEPTGRALAAARRPEYIK---------DESGISYYDVKGGSGAGPINGDFVVIDYQAFLSNGKIFD-----NRKGFVFQMGQRQVIPGLETAVSTMKPGGERKVVIPPTLAYGDRGVCIGESKECLVPPGETLGYSVNLQRVAISP 338
BLAST of NO04G02530 vs. NCBI_GenBank
Match: OEU13338.1 (FKBP-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 115.2 bits (287), Expect = 2.800e-22 Identity = 63/147 (42.86%), Postives = 86/147 (58.50%), Query Frame = 0 Query: 84 TAFGLPLGASAEEPVKVRKVNPNKIRETANGVKYFDVK-VGEGASPREGNYVIITYIGQLSDGTIFDGLHGPGKKP-LAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCTDKGECLVPPNSNVKYDMTLKRVAVSP 229 +A L S + VK P I +NGVKY K V +G+ P+EG+ I Y G LS+G IFD HG GKK L FKLG+ V G+ + M+ G + Q ++P ELAFG+KG+C D GECLV P + + YD+ LK+ ++ P Sbjct: 7 SAGALVTAVSLQPTVKADAAAPT-IYNLSNGVKYAITKDVAKGSFPQEGDICAIEYTGYLSNGAIFDATHGEGKKSVLLFKLGSSVVNAGINSMVGEMKVGQKVQAIIPPELAFGDKGICLDDGECLVKPGATLVYDILLKKASIPP 152
BLAST of NO04G02530 vs. NCBI_GenBank
Match: XP_005827601.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Guillardia theta CCMP2712] >EKX40621.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Guillardia theta CCMP2712]) HSP 1 Score: 113.6 bits (283), Expect = 8.100e-22 Identity = 55/122 (45.08%), Postives = 78/122 (63.93%), Query Frame = 0 Query: 114 GVKYFDVKVGEG------ASPREGNYVIITYIGQLSDGTIFDGLHGPGKKPLAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCTDKGECLVPPNSNVKYDMTLKRVAVSPI 230 G+ Y D K +G A EG++V+I YI L DGTIFD G KP+AF++G KQV+PGL++ ++GM+ G RQ + +E +G +GVC + CLVPPN+++ YD+TL V SPI Sbjct: 88 GLSYVDKKKNDGILSGLTAGVNEGDFVVIDYIAYLRDGTIFDNTRKRG-KPVAFQVGKKQVVPGLDQGIIGMKAGEARQIFMKSEFGYGARGVCLEDKGCLVPPNTDLVYDVTLISVGPSPI 208
BLAST of NO04G02530 vs. NCBI_GenBank
Match: OYW04346.1 (hypothetical protein B7Z61_09935 [Acidobacteria bacterium 37-71-11]) HSP 1 Score: 107.8 bits (268), Expect = 4.400e-20 Identity = 60/171 (35.09%), Postives = 92/171 (53.80%), Query Frame = 0 Query: 51 PSSSGKNTIARRDAVAGTGMMAALILAVGGGTATAFGLPLGASAEEPVKVRKVNPNKIRETANGVKYFDVKVGEGASPREGNYVIITYIGQLSDGTIFDGLHGPGKKPLAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCTDKGECLVPPNSNVKYDMTL 222 P+ K G++ +LA G LP A EP K KV+ K+ TA+G++Y DVKVG GA + G V + Y G+ DG +FD GK+P F LGA +VI G +E + GM+ GG+R+ ++P +LA+G++G ++PPN+ + +D+ L Sbjct: 2 PARGTKGVATMAKCTVRFGVLWGAVLAAG----ITLALPAAARGAEPAKAGKVD-EKVITTASGLQYVDVKVGTGAEAKAGQTVTVNYTGRFEDGKVFDS--SVGKRPFEFPLGAGRVIKGWDEGVAGMKVGGQRKLIIPGKLAYGDRGY-----PGVIPPNATLLFDVEL 160
BLAST of NO04G02530 vs. NCBI_GenBank
Match: XP_005706116.1 (peptidylprolyl isomerase [Galdieria sulphuraria] >EME29596.1 peptidylprolyl isomerase [Galdieria sulphuraria]) HSP 1 Score: 107.1 bits (266), Expect = 7.500e-20 Identity = 62/176 (35.23%), Postives = 95/176 (53.98%), Query Frame = 0 Query: 57 NTIARRDAVAGTGMMAALILAVGGGTATAFGLPL-GASAEEPVKVRKVNP-NKIR--ETANGVKYFDVKVGEGASPREGNYVIITYIGQLSDGTIFDGLHGPGKKPLAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCTDKGECLVPPNSNVKYDMTLKRVAVSP 229 NT+ RR V LA+ + +F L + +A E ++ K++P N +R G+K ++ G G P G+ ++ Y G LS+G +FD G+KP+AF G QVIPG E L M+PGG R ++ LA+GE+GVC + C +PP + +D++L R+A SP Sbjct: 39 NTMQRRQFVR---------LALVAFASVSFPLKIQSLAATEQLEALKLSPFNNLRFVTLEPGLKVAEISQGSGPQPLPGDICVVEYTGYLSNGQVFDSTSAKGRKPIAFLYGKGQVIPGWEIGLRDMRPGGRRVLVISPSLAYGEQGVCLEGYGCYIPPKETLVFDVSLVRIAPSP 205
BLAST of NO04G02530 vs. NCBI_GenBank
Match: PSP18867.1 (peptidylprolyl isomerase [Cyanobacteria bacterium QS_8_64_29]) HSP 1 Score: 107.1 bits (266), Expect = 7.500e-20 Identity = 60/180 (33.33%), Postives = 92/180 (51.11%), Query Frame = 0 Query: 62 RDAVAGTGMMAALILAVGGGTATAFGLPLGASAEEP-------------VKVRKVNPNKIRETANGVKYFDVKVGEGASPREGNYVIITYIGQLSDGTIFDGLHGPGKKPLAFKLGAKQVIPGLEEALLGMQPGGERQCLVPAELAFGEKGVCTDKGECLVPPNSNVKYDMTLKRVAVSP 229 R + G +AA +L + G G +AE P V ++P+ + T +G+KY D++ G+G SP G V++ Y G LSDGT FD P +FKLGA QV+PG EE + M+ GG R+ ++P EL +GE G + ++PPN+ + +D+ L + P Sbjct: 2 RGILISLGALAACLLVLLGAQLANSGSDRALAAESPPTNTPGFEDLPTIVNSSNLDPDAVVTTDSGLKYVDIRQGDGPSPEPGQTVVVHYTGTLSDGTQFDSSR-ERNNPFSFKLGANQVVPGWEEGVATMRVGGRRELIIPPELGYGESGASS-----IIPPNATLIFDVELLEIKGKP 175 The following BLAST results are available for this feature:
BLAST of NO04G02530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02530 ID=NO04G02530|Name=NO04G02530|organism=Nannochloropsis oceanica|type=gene|length=1162bpback to top protein sequence of NO04G02530.1 >NO04G02530.1-protein ID=NO04G02530.1-protein|Name=NO04G02530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=230bpback to top Synonyms
Publications
|