NO04G02180, NO04G02180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02180 vs. NCBI_GenBank
Match: EWM28560.1 (glycoside hydrolase family 8 [Nannochloropsis gaditana]) HSP 1 Score: 672.2 bits (1733), Expect = 1.700e-189 Identity = 334/519 (64.35%), Postives = 402/519 (77.46%), Query Frame = 0 Query: 167 RLDPR--FHSFRRADPLATSSFTDNGGDDDI------LPFNVES--GQAGGEDAFGLGGHPGFFSKDSYKILPHRREPP-KGWMDNLPPFLNPRKLTRRQQALCLMLTVAVLLFLIGIVISAARRT-GIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIAYPYKAEAMRLIHAMGNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQGPKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAYF 674 RL PR S RR ++ D GG D P VE+ GQAG A+ PG+ K+ ++ + PP K W D LP L+PRK TRRQ A+CL++T L+ +I ++ AARRT +E L PGGD GAA TG+YRNLFTE+M K+ E+D K++ + + F GD E LYVEVEPNMAQIINTES++VTSEGISYGMITCVH+ +QE FNRLWNWARFHMQHTAGT+ +FFAWRVT+GGLL+DAKDV+PAPDAEAYIA ALI AHRKWGS+ AYPYKAEA+RL+ MG ++GFF++DGKATFNPTDWG HSNPSYHLPHFY+AFARF+ NEG+ RA+ FWS +A +SR +FHVA++ KTGL+PDYTTL+GK A DPNL GH+NFQWDAWRAPANVAVDWAWWN DGWQ K+ADR L FFASQGP+Y SQ+T DG++ADNN+GHD GLV+MNAVV LA +D+ L SFV+ELW+ +P GKGRYYPAMLYMMSLLHCSG+F+AYF Sbjct: 218 RLPPRPPKPSGRREAAARLAATYDVGGADYAPSASLDFPSRVEAGQGQAGLGSAYD-SQAPGWAGKELHRGRRRGQPPPRKHWTDALPAVLDPRKYTRRQAAVCLIMTTLALIVMIVVLSMAARRTIEVEGLLPGGDQGAAVTGVYRNLFTELMAKTPAESDVKVQEAYAHLFHGDPETEALYVEVEPNMAQIINTESDMVTSEGISYGMITCVHMDEQEPFNRLWNWARFHMQHTAGTFASFFAWRVTKGGLLVDAKDVIPAPDAEAYIAMALITAHRKWGSTPAYPYKAEALRLLRVMGQWQRGFFSRDGKATFNPTDWGSTHSNPSYHLPHFYEAFARFMANEGESRASGFWSGAARKSRFYFHVASNKKTGLMPDYTTLDGKPAPDPNLGGHTNFQWDAWRAPANVAVDWAWWNADGWQPKFADRILAFFASQGPEYASQYTTDGQVADNNTGHDPGLVAMNAVVVLAARDQALKPSFVRELWDLPIPSGKGRYYPAMLYMMSLLHCSGKFKAYF 735
BLAST of NO04G02180 vs. NCBI_GenBank
Match: XP_005856116.1 (glycoside hydrolase family 8 [Nannochloropsis gaditana CCMP526] >EKU20252.1 glycoside hydrolase family 8 [Nannochloropsis gaditana CCMP526] >EWM25803.1 glycoside hydrolase family 8 [Nannochloropsis gaditana]) HSP 1 Score: 342.0 bits (876), Expect = 4.100e-90 Identity = 175/387 (45.22%), Postives = 236/387 (60.98%), Query Frame = 0 Query: 293 GAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEV-----EPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIAYPYKAEAMRLIHAMGNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAYF 674 GAA G+YRNLF E++ KS E + KL+ W F+GD+ +YV V + ++NTES VTSE +SYGM+ V ++E F+ LW+WA +M+H G Y+ FFAW+ + G +D PAPDAE +IATALI A+ +W S Y Y+ EA+ L+ MG+ ++G FTK G+ T NP + +NPSYHLPHFY+ +ARFL + G + A F+ ++A +SR+ H A D TGL DYT EG G D L GHSNFQWDAWR ANVAVDW+WW D WQQ+ AD F QG Y S + ++G H GLV++NAV +LA D + S+FV ELW +P + RYY ML +SLL SGR+++ + Sbjct: 386 GAAEGGLYRNLFAEMLHKSDAEVEKKLQDTWRFLFEGDVSTEAIYVPVGETPEGDKLGYVLNTESGWVTSEAMSYGMMVAVQYDRRETFDALWSWASRYMRHVTGRYKGFFAWKCSLAGRKLDG---TPAPDAEEWIATALIFANNRWMSQGRYDYEKEAVALLLGMGDPRRGMFTKHGEVTLNPVRPVI--TNPSYHLPHFYEVWARFLNDRGQYQLASFYLQAAERSRRLLHKAVDQHTGLSADYTDYEGVGVKD--LAGHSNFQWDAWRVVANVAVDWSWWRRDAWQQREADTLQAFLIRQGIQDYPSTYALNGTAL--LKSHSVGLVAVNAVASLAATDRNVASAFVAELWNAAIPRNQWRYYNGMLVFLSLLQVSGRYRSLY 763
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_026073703.1 (glycoside hydrolase [Acetivibrio cellulolyticus]) HSP 1 Score: 295.8 bits (756), Expect = 3.400e-76 Identity = 169/422 (40.05%), Postives = 234/422 (55.45%), Query Frame = 0 Query: 259 CLMLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 C++ + + L L + + + A G GA T YRNLF E+ KS E D KL+ +D F GD L+ V + A I++ N V SEG+SYGM+ CV + K++ F+ LW WA+ +M H G ++ FFAW+ + G D PA D E Y AT+L+ A +WG Y Y AEA L+ AM G F + K F PT S+PSYHLP FY+ +A + + + FWS +A SR+FF A + TGL PDY +G GH++F++DAWR +N+AVD+AWW D WQ +ADR GFF +G YG+QFT+ G + +S H GLV+MNAV +LA+ ++ + FV+ELW+ +P GK RYY MLYMM LLHCSG F+ + Sbjct: 4 CILYLLTISLVLTALSFPIGKNSVKAASG-----GAYETNTYRNLFAEI-GKSQSEIDAKLQKAFDQMFYGDDSTQRLFYPVGTDKAYIMDVGDNDVRSEGMSYGMMICVQMDKKKEFDMLWKWAKEYMYHADGQFKGFFAWQCSTSG---SKMDNTPASDGEEYFATSLLFASNRWGDGTGIYNYSAEAKALLDAMLHQSDDGVGVNMFNKTEKKVVFCPTSGADAFSDPSYHLPAFYELWALWGEKDN-----SFWSDAASASRQFFQKATNSTTGLAPDYANFDGSPKDVSWSSGHADFRFDAWRVASNIAVDYAWWGKDSWQVTFADRIQGFFYKEGISSYGNQFTVSG--SKLSSDHSPGLVAMNAVASLASTNKS--NEFVEELWKVSIPSGKWRYYDGMLYMMGLLHCSGNFKIW 407
BLAST of NO04G02180 vs. NCBI_GenBank
Match: CDD73951.1 (endo-1 4-beta-xylanase [Clostridium sp. CAG:62]) HSP 1 Score: 293.1 bits (749), Expect = 2.200e-75 Identity = 164/388 (42.27%), Postives = 223/388 (57.47%), Query Frame = 0 Query: 293 GAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 GA TG YRNLF E + S E D K+E W +F G E+ +Y V +MA I +++ V SEG+SYGM+ CV + KQE FNRLW WA+ +MQH +G YE +FAW++ + G + KD PA D E Y AT+L+ A +WG+ Y Y EA ++ M G F F P S+PSYHLP FY+ +A + + D FW ++A SR+ F A + KTGL PDY+ G + N H++F++DAWR AN+A D+AWW D W +A+R FF QG YG+Q+++DGK N+ H GLV+MNA +LA+ D+K SF+++LW GK RYY LYMM LLHCSG+F+AY Sbjct: 132 GAVSTGKYRNLFKE-LGYSDAEIDKKVESAWQKFFYGTDEER-IYYPVGEDMAYIYTADTDDVRSEGMSYGMMICVQMDKQEEFNRLWKWAKTYMQHKSGQYEGYFAWQMNKDGKI---KDDTPAADGEEYFATSLLFASARWGNGKGIYNYNKEAQEILKTMLHQADDGVGVNMFDRTHKMPVFCPIGNAATFSDPSYHLPAFYEVWAIKAEQDND-----FWREAAEASRQHFKDATNEKTGLGPDYSEYSGTAKHEGN---HADFRFDAWRIAANIACDYAWWAQDSWATTHANRIQSFFYDQGVDSYGNQWSLDGKNL-NSPDHSPGLVAMNATASLASSDKKSW-SFLEDLWNISPTTGKYRYYDGCLYMMGLLHCSGKFRAY 504
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_012235665.1 (endo-1,4-beta-xylanase [Sorangium cellulosum] >CAN93193.1 Endo-1,4-beta-xylanase [Sorangium cellulosum So ce56]) HSP 1 Score: 286.6 bits (732), Expect = 2.000e-73 Identity = 165/408 (40.44%), Postives = 230/408 (56.37%), Query Frame = 0 Query: 294 AAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPN----MAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYET--FFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGNSKK---------GFFTKDGKATFNPTDWGLR-------------HSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQGPKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 A TG+YRNLF E ++ E + K+ WD+ FKGD + +Y E E N +AQI + S V SEG+SYGM+ V Q F+ LWNWA+ +M H T+ +F+W++ G +D +PAPD E Y ATAL A +WG+ Y Y+AEA RL+ M N + T G FN + +R H++PSYHLP FY+ +A++ G FWS++A SR +FH+AA P+TGL PDY +G + +F++DAWR N +VDWAWW D QQ+ +DR FF +QG +YG+QFT+DG+ ++ H +GLV+MNA +LA KD + + FV+ LW+ D P G+ RYY MLY M+LLH G+FQAY Sbjct: 68 AVDTGVYRNLFVE-NGRTQDEVNAKITAAWDHLFKGDPAQEAVYFEQEENDNGPLAQIRDIASEDVRSEGMSYGMMIAVQTDHQAEFDALWNWAKTYMFHADETHPAYGYFSWQMNFDGTPLDE---MPAPDGEEYFATALYFASGRWGNGEGIYNYRAEADRLLDLMKNRPEITGESFGNGETRTTTGSTLFNTENHQIRFTPDTGNFETNGDHTDPSYHLPAFYEIWAKY----GPEADRAFWSEAAEVSRGYFHLAAHPETGLTPDYANFDGTPKAASWKPESVDFRFDAWRTAMNWSVDWAWWAKDERQQELSDRIQAFFEAQGAEYGNQFTLDGEAL--SADHSSGLVAMNAAASLAAKDPR-SADFVQALWDLDPPSGQYRYYDGMLYFMALLHVGGQFQAY 464
BLAST of NO04G02180 vs. NCBI_GenBank
Match: OLA00465.1 (hypothetical protein BHW11_10790 [Clostridium sp. CAG:62_40_43]) HSP 1 Score: 282.0 bits (720), Expect = 5.000e-72 Identity = 161/388 (41.49%), Postives = 221/388 (56.96%), Query Frame = 0 Query: 293 GAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 GA T YRNLF E + S E D K+E W F G+ E+ +Y V +MA I +++ V SEG+SYGM+ CV + KQE FNRLW WA+ +MQHT+G ++ +FAW++ G I PA D E Y AT+L+ A +WG+ Y Y EA ++ M G F F P +S+PSYHLP FY+ +A + + D FWS++A SR+ F A + KTGL PDY+ G ++ N H +F++DAWR AN+A D+AWW D W +A+R FF QG YG+Q+++DGK + H GLV+MNA +LA+ D+K SF+++LW GK RYY LYMM LLHCSG+F+AY Sbjct: 404 GAVYTEKYRNLFKE-LGYSDAEIDEKVESAWKKLFYGNDEER-IYYPVGEDMAYIYTADTDDVRSEGMSYGMMICVQMDKQEEFNRLWKWAKTYMQHTSGEFKGYFAWQMKTDGSKISG---TPASDGEEYFATSLLFASARWGNGEGIYNYNKEAQEILTTMLHQADDGQGVNMFDKTHKMPVFCPIGNAATYSDPSYHLPAFYEVWAIKAEQDND-----FWSEAAEASRQHFKDATNEKTGLGPDYSEYTGAAKNEGN---HGDFRFDAWRIAANIACDYAWWAKDTWATTHANRIQSFFYDQGVDSYGNQWSLDGK--NLGPDHSPGLVAMNATASLASSDKKSW-SFLEDLWNISPTTGKYRYYDGCLYMMGLLHCSGKFRAY 775
BLAST of NO04G02180 vs. NCBI_GenBank
Match: OGC02117.1 (hypothetical protein A2V82_00785 [candidate division KSB1 bacterium RBG_16_48_16]) HSP 1 Score: 281.6 bits (719), Expect = 6.500e-72 Identity = 156/393 (39.69%), Postives = 228/393 (58.02%), Query Frame = 0 Query: 293 GAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGNSKKG----------FFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDG-KLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 GA +G+Y NLF E++ S + K++ W+ F GD + +Y VEP+MA I +T N + SEG+SYGM+ V L K+ F+RLW WA+ +MQH +G + +FAW++ G ++D A D E +I AL A +WG+ Y Y++EA ++ AM N ++ F K+ + F P S+PSYHLPHFY+ +AR+ E +FW +A SR+F AA PKTGL+PDY +G DP G +F++DAWR N+AVD+ W+ D W + ++ L FF QG YG+ FT+DG KL+D+ H GLV+MNAV +LA+ ++ + FV+ELW +P G GRYY +LYM+++L SG F+ Y Sbjct: 47 GAYYSGVYPNLFQELLGISESQVHAKIDSAWNQLFYGDDQTQRVYYPVEPDMAYIEDTWHNDIRSEGMSYGMMIAVQLNKRAEFDRLWKWAKTYMQHKSGARKNYFAWQLHTNGAMMDHNS---ASDGEEWIVMALFFASARWGNGTGIYNYQSEAQAILDAMLNKEETSDNDTTITNMFNKKEKQIVFVPVGNADDFSDPSYHLPHFYELWARWADKEN-----QFWCDAASASRRFLKKAAHPKTGLLPDYAHFDGT-PIDPWNGGSDDFRFDAWRVAMNLAVDYTWFAKDDWAVEQSNIMLRFFHDQGVGTYGNLFTLDGVKLSDD---HSTGLVAMNAVASLASTND-FRTDFVRELWNASIPSGAGRYYDGLLYMLAMLQVSGNFRIY 426
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_080065161.1 (glycoside hydrolase [[Clostridium] hungatei] >OPX43360.1 reducing end xylose-releasing exo-oligoxylanase [[Clostridium] hungatei]) HSP 1 Score: 269.6 bits (688), Expect = 2.600e-68 Identity = 158/421 (37.53%), Postives = 227/421 (53.92%), Query Frame = 0 Query: 261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 M V L ++ IV +A + + A G TG YRN+F E ++ + KL ++D +FKGD L+ E + A I +T +N V SEG+SY M+ CV + K++ F+ LW W+R HM ++G Y+ FFAW+ G ++ D PA D + Y A AL+ A R+WG+ Y Y+AEA ++ AM G F + F P ++PSYHLP FY+ +A + KN+ D WSK A SR+FF + + TGL PDY +G GH++F++DAWR +NV VD+AWW D W +A + FF +G +GS +T+ G + NS H GLV+MNAV A+A+ D FV ELW +P G+ RYY MLYM+ +LH SG F+ + Sbjct: 1 MKRVLAYLLVLVIVFTALPISFVNA----ATGGYYSTGTYRNIFVET-GRTEAQVQDKLNTMFDKFFKGDTNNQRLFYESGTDEAYIRDTGNNDVRSEGMSYAMMICVQMDKKKEFDMLWKWSRNHMYQSSGQYKGFFAWQCNYSGGIM---DTTPASDGDEYFAMALLFAARRWGNGTGIYNYEAEAQVILDAMLHQADDGVGVNMFDKTQNQVVFCPNGGSATFTDPSYHLPAFYELWALWAKNQNDRTT---WSKIAATSREFFKKSTNSTTGLNPDYANFDGTPKDVSWSSGHADFRYDAWRVASNVCVDYAWWQKDAWASTTFAPKIQSFFKKEGVSTHGSNYTLAG--SKLNSDHSPGLVAMNAVTAMAS-DAATAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHLSGNFKIW 407
BLAST of NO04G02180 vs. NCBI_GenBank
Match: ABB71891.1 (xylanase [uncultured bacterium]) HSP 1 Score: 268.5 bits (685), Expect = 5.700e-68 Identity = 160/404 (39.60%), Postives = 221/404 (54.70%), Query Frame = 0 Query: 291 DDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPN----MAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYET--FFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGN-------------SKKGFFTKDGK-ATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 D GA TG YRNLF E S +E K+ ++ F GD +Y N M + + S V SEG+SYGM+ CV L K++ F+ LWNWA+ +M H+ + +FAW ++ G KD +PAPD E Y A AL A +WG+ Y YKA+A RL+ M + S F+ + K F P H++PSYHLP FY+ +A + G + + FW ++A SR FF ++A+PKTGL PDY +G P +NFQ+DAWR N +VDWAWW D Q++ +DR FF S+G YG+ FT+DG H GLV+MNA +LA +E+ FV+ELW +P+G+ RYY MLY+M+LLHCSG F+ + Sbjct: 3 DRGAFYTGKYRNLFLEA-GYSQIEVTEKISRAFEQLFYGDRNSQTVYYPAGENDNGEMGYLSDVNSGDVRSEGMSYGMMICVQLDKKKEFDALWNWAKTYMYHSNPAHPAYGYFAWSLSTEG---RHKDQMPAPDGEEYFAMALYFAANRWGNGEGIYNYKAQADRLVSDMKDRNIITGQVGEQIQSAGNIFSLEYKMIRFTPDIANSEHTDPSYHLPAFYELWALW----GPEKDSDFWKEAAKVSRDFFFISANPKTGLTPDYANFDGTPWVCPWNPNAANFQYDAWRTVMNWSVDWAWWEKDERQRELSDRLQAFFESRGISDYGATFTLDG--VPIGGDHSQGLVAMNATASLAATNER-AHRFVRELWNASIPDGQYRYYDGMLYLMALLHCSGDFKIW 395
BLAST of NO04G02180 vs. NCBI_GenBank
Match: AQQ75022.1 (GH8 Xylanase [uncultured bacterium]) HSP 1 Score: 266.5 bits (680), Expect = 2.200e-67 Identity = 164/433 (37.88%), Postives = 233/433 (53.81%), Query Frame = 0 Query: 253 RRQQALCLMLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGNSKKG----------FFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAYF 674 R ++A L V V++ L+ V AA GA TG Y+NLF ++ KS E + KL + F G+ +Y V +MA I + S V +EG+SYGM+ V L K+E F+RLW WA+ +MQH +G E +FAW G ++D+ A D E + TAL+ A +WG+ Y YK EA+ +++AM + F T+ + F P ++PSYHLPHFY+ +A + D + FW ++A SR F P+TGL PDY T +GK DP GH NFQ+DAWR NVA+D+ W+ D W ++R L FF+SQG Y +T+DGK + + GL +MNAV ALA + + SFV++LW+ +P G+GRYY MLY++ LL SG F+ YF Sbjct: 25 RCEEAAMKRLCVVVMMALMFCVGRAAHA-----------KGAYYTGNYQNLFVSLLGKSNEEVNEKLYRAFTQLFYGNDTTERVYYPVGNDMAYIEDILSRDVRTEGMSYGMMIAVQLNKKEEFDRLWKWAKTYMQHKSGQREHYFAWHCNTDGTVLDSNS---ASDGEEWFVTALLFASHRWGNGEGIYNYKQEALTILNAMLSKADSSDDPHVVTTMFNTRYKQVVFVPAGEADDFTDPSYHLPHFYELWALW-----DESHSTFWKEAATASRNFLKKVIHPETGLAPDYATFDGK-PIDPWNGGHKNFQYDAWRVAMNVALDYEWFAKDRWAVLQSNRLLSFFSSQGIDSYVGLYTLDGKKL--SDFQNPGLTAMNAVAALAATVD-VRKSFVQKLWDMPIPSGEGRYYDGMLYILGLLQVSGNFRIYF 434 The following BLAST results are available for this feature:
BLAST of NO04G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02180 ID=NO04G02180|Name=NO04G02180|organism=Nannochloropsis oceanica|type=gene|length=3683bpback to top protein sequence of NO04G02180.1 >NO04G02180.1-protein ID=NO04G02180.1-protein|Name=NO04G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=674bpback to top Synonyms
Publications
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