NO04G02080, NO04G02080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02080 vs. NCBI_GenBank
Match: EWM28559.1 (hnh endonuclease [Nannochloropsis gaditana]) HSP 1 Score: 448.7 bits (1153), Expect = 1.700e-122 Identity = 219/276 (79.35%), Postives = 229/276 (82.97%), Query Frame = 0 Query: 90 DEGQAQLRASFMKTPDSSATRADFGLSGPGFEMELLPPINPDAGPVTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTDHHLRLLRQTGKYPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFPHESWQTYLGGPPE 366 DEGQAQ A MK P SATRADFGL GP FEMELLPP + +AGP T+ TTDHHLRLLRQTGKYPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDS+IQSTAGPWQLPSV+CLKQYQKGCRERPPPLNRRNIYIRD Y CAYC+QRL A DLTLDHV+PRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELK+IGMVL+NPPRKPKMSELQRQARLYRTAAG FPHESW+TYLGGPPE Sbjct: 190 DEGQAQRHAKHMKKPTDSATRADFGLGGPDFEMELLPPTDKNAGPKTA-----------TSRKGVSGSVGTVGGDEDHTTDHHLRLLRQTGKYPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSYIQSTAGPWQLPSVVCLKQYQKGCRERPPPLNRRNIYIRDRYSCAYCSQRLSAHDLTLDHVMPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKEIGMVLLNPPRKPKMSELQRQARLYRTAAGVFPHESWETYLGGPPE 454
BLAST of NO04G02080 vs. NCBI_GenBank
Match: WP_086463963.1 (HNH endonuclease [Oceanibaculum nanhaiense]) HSP 1 Score: 173.3 bits (438), Expect = 1.400e-39 Identity = 87/188 (46.28%), Postives = 114/188 (60.64%), Query Frame = 0 Query: 182 YPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFPHESWQTYLGGPPEDPEG 370 +P LVLN D +PLSY PLS+ WQ+ +KA+FL+RV +LA+YD ++S +LPSVI LKQY R P R N+++RD + C YC +LT DHV+PRS+GG+ SWDN+VT C CN KG R +DIGM+ + PPR+P ELQ+ R + H SWQ YL E EG Sbjct: 8 WPALVLNADCRPLSYYPLSLWNWQDTVKAVFLDRVNILAHYDQLVRSPTFEMRLPSVISLKQYVPAARR--PAFTRFNVFLRDSFTCQYCGDLFSTQELTFDHVIPRSRGGRTSWDNVVTACGPCNLFKGNRMP---RDIGMLPLEPPRQPTSFELQQNGRGF---PPNHLHRSWQDYLYWDTELEEG 187
BLAST of NO04G02080 vs. NCBI_GenBank
Match: WP_008946022.1 (HNH endonuclease [Oceanibaculum indicum] >EKE68893.1 putative HNH endonuclease [Oceanibaculum indicum P24]) HSP 1 Score: 172.6 bits (436), Expect = 2.400e-39 Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 0 Query: 182 YPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFPHESWQTYLGGPPEDPEG 370 +P LVLN D +PLSY PLS+ WQ+ +KA+FL+RV +LA+YD ++S +LPSVI LKQY R P R N+++RD + C YC + +LT DHV+PRS+GG+ SW+N+VT C CN KG R +DIGM+ + PPR+P ELQ+ R + H SWQ YL E EG Sbjct: 8 WPALVLNADCRPLSYYPLSLWNWQDTVKAVFLDRVNILAHYDQLVRSPTFEMRLPSVISLKQYVPAARR--PAFTRFNVFLRDRFSCQYCGELFSTQELTFDHVIPRSRGGRTSWENVVTACGPCNLFKGNRMP---RDIGMLPLEPPRQPTSFELQQNGRGF---PPNHLHRSWQDYLYWDTELEEG 187
BLAST of NO04G02080 vs. NCBI_GenBank
Match: AMS30859.1 (MFS transporter [Hyphomonadaceae bacterium UKL13-1]) HSP 1 Score: 169.5 bits (428), Expect = 2.000e-38 Identity = 87/183 (47.54%), Postives = 118/183 (64.48%), Query Frame = 0 Query: 182 YPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFP----HESWQTYL 361 +P LVLN D +PLSY PLS+ WQ+A+KA++++RV V+A YD +QS + +LPSVI LK+Y + ++R P R N+++RD + CAYC DLT DHV+PRSKGGK +W+N+VT C CN RKG R+ L+++GM PPR+P M ELQ R FP HESW +L Sbjct: 10 FPALVLNADYRPLSYYPLSVWSWQDAVKAVYMDRVEVVAEYDQAVQSPSFEMRLPSVISLKEYVQ--QDRAPAFTRFNLFLRDGFKCAYCH---ATDDLTFDHVVPRSKGGKTTWENIVTACSPCNLRKGGRS---LREVGMTPRKPPRRPTMHELQAMGR-------KFPPHHLHESWVDWL 177
BLAST of NO04G02080 vs. NCBI_GenBank
Match: XP_005718133.1 (unnamed protein product [Chondrus crispus] >CDF38248.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 168.7 bits (426), Expect = 3.400e-38 Identity = 86/178 (48.31%), Postives = 116/178 (65.17%), Query Frame = 0 Query: 183 PVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFPHESWQTYL 361 P LVLN D PLSY+PLS+ WQ+AIKA+FL+RVTV+A YD ++S + LPSVI LKQYQ R+R P +R N+++RD + C YC +R +LT DHV+PR GGK +W N+VT C CN KG+ + ELK M L+ P +P +LQ +ARL+ + HESW+ Y+ Sbjct: 95 PALVLNADFSPLSYMPLSLWPWQDAIKAVFLDRVTVVATYDIGVRSPGMIFPLPSVISLKQYQPRARKR-PAFSRFNVFMRDAFSCQYCGRRFPTQELTFDHVIPRCAGGKTNWQNVVTACIGCNHSKGRYLLHELKH--MKLLRMPHEPTNGQLQARARLF---PPRYLHESWRDYV 266
BLAST of NO04G02080 vs. NCBI_GenBank
Match: WP_019016054.1 (HNH endonuclease [Elioraea tepidiphila]) HSP 1 Score: 167.5 bits (423), Expect = 7.600e-38 Identity = 82/179 (45.81%), Postives = 114/179 (63.69%), Query Frame = 0 Query: 182 YPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFPHESWQTYL 361 YP LVLN D +PLSY PLS+ WQ+A+KA+F++RV VL+ Y++ ++S + +LPSVI LK+Y R P R N+++RD + C YC + DLT DHV+PRSKGG+ +W+N+VT C CN RKG R +E + M NPPR+P ELQ R + + HESW+ +L Sbjct: 8 YPALVLNADFRPLSYFPLSLWAWQDAVKAVFMDRVAVLSEYETEVRSPSVSMKLPSVIALKEYVPSARR--PAFTRFNVFLRDCFACQYCGESFPTHDLTFDHVVPRSKGGRTTWENVVTACSCCNLRKGNRLPRECR---MWPRNPPRQPTSWELQENGRAF---PPNYLHESWRDFL 178
BLAST of NO04G02080 vs. NCBI_GenBank
Match: OFX13347.1 (MFS transporter [Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8]) HSP 1 Score: 167.5 bits (423), Expect = 7.600e-38 Identity = 84/176 (47.73%), Postives = 113/176 (64.20%), Query Frame = 0 Query: 185 LVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFPHESWQTYL 361 LVLN D +PLSY PLS+ WQ+AIKA+FL+RV+V+A YD + S + +LPSVI LK Y R P R N+++RD + C YC QRL A DLT DHVLPRS+GG+ +W+N+V C CN KG R+ L+ GM L++PP +P +LQ R + + HESW+ +L Sbjct: 10 LVLNADFRPLSYFPLSLWSWQDAIKAVFLDRVSVVAEYDRVVHSPSWQMRLPSVIALKDYI--TPSRTPAFTRFNVFLRDGFTCQYCGQRLPAHDLTFDHVLPRSRGGRTTWENVVAACAPCNLTKGHRS---LQASGMTLIHPPFRPSSQKLQHSGRAF---PPNYLHESWRDFL 177
BLAST of NO04G02080 vs. NCBI_GenBank
Match: OUX74332.1 (HNH endonuclease [Alphaproteobacteria bacterium TMED89]) HSP 1 Score: 167.5 bits (423), Expect = 7.600e-38 Identity = 86/179 (48.04%), Postives = 111/179 (62.01%), Query Frame = 0 Query: 182 YPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFPHESWQTYL 361 YP LVLN D +PLSYLPLS+ WQ+++KA F RV V+A Y+ I+S + LPSVI LK Y R P R N+++RDH+ C YC+ R LT DHV+PRSKGG SW+N+VT C++CN RKG R V +D GM L+ P +P +LQ R + F HESW+ YL Sbjct: 9 YPALVLNADFRPLSYLPLSLWGWQDSVKACFQGRVNVVAEYEHVIRSPSFEMLLPSVIALKDYVP--MNRSPAFTRFNVFLRDHFRCQYCSTRFPVQSLTFDHVIPRSKGGGTSWENVVTACQKCNLRKGNRYV---RDSGMRLIKEPLRPTAYQLQDVGRAF---PPNFLHESWEDYL 179
BLAST of NO04G02080 vs. NCBI_GenBank
Match: PHS24105.1 (HNH endonuclease [Robiginitomaculum sp.]) HSP 1 Score: 167.5 bits (423), Expect = 7.600e-38 Identity = 87/179 (48.60%), Postives = 108/179 (60.34%), Query Frame = 0 Query: 182 YPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFPHESWQTYL 361 +P L+LN D QPLSY PLS++ W+EAIKA+FLERV ++A YD + S LPSV+ LK Y + R P R N+++RD + C YC DLT DH++PRSKGG WDN+VT C CN RKG R K GMV +PPR+P ELQ Q R + F HESW YL Sbjct: 14 WPCLILNADYQPLSYHPLSLLPWKEAIKAVFLERVNIVAQYDHRVHSPTQSMALPSVVALKDYV--TQNRVPAFTRFNVFLRDGFSCVYCG---SGNDLTFDHLIPRSKGGTTKWDNIVTACSPCNLRKGGRMPKH---AGMVPAHPPRRPSSFELQAQGRRFPPG---FLHESWLDYL 181
BLAST of NO04G02080 vs. NCBI_GenBank
Match: WP_012227485.1 (HNH endonuclease [Gluconacetobacter diazotrophicus] >CAP57071.1 putative endonuclease protein [Gluconacetobacter diazotrophicus PA1 5] >ACI52969.1 HNH endonuclease [Gluconacetobacter diazotrophicus PA1 5]) HSP 1 Score: 167.2 bits (422), Expect = 9.900e-38 Identity = 86/186 (46.24%), Postives = 113/186 (60.75%), Query Frame = 0 Query: 175 LLRQTGKYPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSFIQSTAGPWQLPSVICLKQYQKGCRERPPPLNRRNIYIRDHYLCAYCTQRLKATDLTLDHVLPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKDIGMVLMNPPRKPKMSELQRQARLYRTAAGTFPHESWQTYL 361 +L + YP LVLN D +PLSY PLS+ WQ+AIKA+FL+RV+VL+ YD ++S + +LPSVI LK Y R P R N+++RD++ C YC RL DLT DHV+PR KGG+ +W+N+VT C CN KG R ELK M P +P ELQ R + + HESW+ YL Sbjct: 1 MLAGSPHYPALVLNADFRPLSYFPLSLWSWQDAIKAVFLDRVSVLSEYDEEVRSPSRSLRLPSVIALKDYIPTARR--PAFTRFNVFLRDNFSCQYCLDRLPTHDLTFDHVIPRCKGGRTTWENVVTACSPCNLMKGSRMPHELK---MYPRRTPSQPSTWELQENGRSF---PPNYLHESWRDYL 178 The following BLAST results are available for this feature:
BLAST of NO04G02080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02080 ID=NO04G02080|Name=NO04G02080|organism=Nannochloropsis oceanica|type=gene|length=1648bpback to top protein sequence of NO04G02080.1 >NO04G02080.1-protein ID=NO04G02080.1-protein|Name=NO04G02080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bpback to top Synonyms
Publications
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