NO04G02060, NO04G02060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02060 vs. NCBI_GenBank
Match: EWM28527.1 (Transcription factor IIS [Nannochloropsis gaditana]) HSP 1 Score: 462.2 bits (1188), Expect = 2.600e-126 Identity = 325/660 (49.24%), Postives = 383/660 (58.03%), Query Frame = 0 Query: 5 LVRLTRDPVRQEVLEAAHPALDNWKAENAKKCWEP-----------VSGSSNSSK--------KATMQRGLIETFRRIVHLEGTGVYAQEKTKRDLFDTFVSVESRTDHRPALPSPGSSTAAVAVGGAAATSQKWSIVDYLGWNPLAGPPPESLSDPFDPEGRKRLSKHRVLALGLELMLLVELSGLVRDH-VGQQQKRRXXXXXXXXXVGEEEVF----GFYEKEEGDKTEALKGGGDLERMRRQHRALSAECRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNKLQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLAATRALLVREFNGFGPLPLEVVDMLLAWQKEDADPLPPTGSSNSSGTNRGSVELPLKEEDGSVVFLQPDGKMDSRVKLLGRVVTKFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKADQAQAARIVKLGKEIERAKEEREWGLVLEGLRGVEQERMTLVMLSATSIGRVVNKLKKVEDGAVADLGRKLVKEWKALVE 641 +VRLTRDPVRQEVLEAAH L+ WK ENA++ W P +GS + KAT Q+ LI RRI LE TG+YAQE++KR L FVSV ++ + P P AA WSI DYLGWNPL PPP SL DPFDP G RLS+ RVLAL +E M+++ELSGLV D G++ + XXXXXXXXX E G E+G A +E Q AL+ E R+VHVLKWLP VRP+ GP V+ YRDQV LATSVV ALSRGGELRIPALLLPHEYFFLREHLAVQLL RDVL VG++IDALRVLGSH+ENPM+RAGM++L+ QA+AGNW ++T A + + + TLAATRALLVREFNGFGPLPLEV+D+LLAWQKEDADPLP +LP + EDGS VFL PDG D RVK L R+VTK K XXXXXXXXXXXXX ADQA AR+ +LG++IE AK +++W V E L +E E M+L +L+ATSIGRVVNKLKK ED VA LG+ LVK+WKALVE Sbjct: 124 MVRLTRDPVRQEVLEAAHLPLEKWKVENAQEQWGPSQVRQGNGSGGAAGSLEGGRCAHQEDIGKATTQQTLIVAVRRIFSLERTGMYAQEESKRALLKAFVSVREGSERASSSPVP-----------EAAHRSTWSIEDYLGWNPLHAPPPASLRDPFDPTG-PRLSQQRVLALSVEWMMVLELSGLVADRSEGEEGRXXXXXXXXXXXXXXXEXXXXDNGAVAVEDGG--AASPKAATMEESEPQTAALAEEGRLVHVLKWLPCVRPYRGPAQVEAAVYRDQVCLATSVVWALSRGGELRIPALLLPHEYFFLREHLAVQLLQRDVLSVGRTIDALRVLGSHEENPMIRAGMTYLMRNQAQAGNWPAATTGAPVTEEEDR----------NARLGGYGGRGTGRDRFVAPTLAATRALLVREFNGFGPLPLEVLDLLLAWQKEDADPLPG--------------DLPPQGEDGSSVFLLPDGTWDRRVKDLERIVTKIK----------KQFKKRQAGAAAVRAASATPSAASTPAPMVPASGALRMADTAHPLAAQGSQEAAXXXXXXXXXXXXXXXADQAGVARVNELGRQIEGAKAKQDWTRVREALLTLEAEPMSLTILTATSIGRVVNKLKKAEDAGVALLGKGLVKKWKALVE 735
BLAST of NO04G02060 vs. NCBI_GenBank
Match: XP_009033911.1 (hypothetical protein AURANDRAFT_70922 [Aureococcus anophagefferens] >EGB11555.1 hypothetical protein AURANDRAFT_70922 [Aureococcus anophagefferens]) HSP 1 Score: 97.1 bits (240), Expect = 2.200e-16 Identity = 61/192 (31.77%), Postives = 90/192 (46.88%), Query Frame = 0 Query: 234 CRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNKLQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLAATRALLVREFNGFGPLPLEVVDMLLAWQKED 426 C VL L T+RP+ GP + + Y DQ L T VV L+ GEL + LLPHE+ F++EH+ + + RDV LVG+ ++ LR G+ D + ++ G++FLL AQ +A + A T+ A++ALL F G+GP L VD+L W+ D Sbjct: 364 CAYAEVLAHLRTLRPYRGPADLPWDAYVDQCYLVTHVVFTLNNWGELALEPDLLPHEHAFIKEHIGIAIRERDVHLVGEYVECLRCFGATDADASVQLGITFLLNAQDQATHRWDVDMDA--------------------------------YTSYHATMVASQALLAHSFRGYGPGLLGAVDVLDKWRAAD 523
BLAST of NO04G02060 vs. NCBI_GenBank
Match: OAO14119.1 (Prenyltransferase [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 94.4 bits (233), Expect = 1.400e-15 Identity = 59/196 (30.10%), Postives = 91/196 (46.43%), Query Frame = 0 Query: 230 LSAECRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNKLQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLAATRALLVREFNGFGPLPLEVVDMLLAWQKED 426 + EC L+WLP++RP+ + + + D+ L T VV LS+ G+LR+ LPHEY FLREHL + L +DV LVG+ ++ LR+ G + ++ GM FLL Q G+W NK ++ T+ A +AL+ EF+GFG + ++ W E+ Sbjct: 187 IELECDYDDYLRWLPSLRPYKSSNELPWKEFVDECYLITHVVFTLSQWGQLRLQIQQLPHEYLFLREHLPLLLQKQDVHLVGEFVECLRIFGVAENASLILEGMHFLLEEQNADGSW--------DNKRKEM-------------------NVDEAYVAYHATMVAIQALIPSEFSGFGCMNESTETIVSRWYGEE 355
BLAST of NO04G02060 vs. NCBI_GenBank
Match: XP_014527735.1 (hypothetical protein JH06_3471 [Blastocystis sp. subtype 4] >KNB44292.1 hypothetical protein JH06_3471 [Blastocystis sp. subtype 4]) HSP 1 Score: 92.4 bits (228), Expect = 5.400e-15 Identity = 63/233 (27.04%), Postives = 101/233 (43.35%), Query Frame = 0 Query: 230 LSAECRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNKLQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLAATRALLVREFNGFGPLPLEVVDMLLAWQKED---ADPLP-PTGSSNSSGTNRGSVELPLKEEDGSVVF 459 + EC L+WLP +RP+ + + + DQ L T V+ LS+ G+LR+ LPHEY FL+EHL + + +DV LVG+ I LR+ G + N + G+ FLL Q G+W N++ T+ A +AL+ F GFG + +++ W + +P+P P S N + L E++ ++F Sbjct: 189 IDLECSYDDFLRWLPFLRPYKSSLELPWKEFVDQCYLITHVIFTLSQWGQLRLQIQQLPHEYLFLQEHLPLMIQKKDVHLVGEFIQCLRIFGVEENNSSILDGLQFLLEEQNADGSW--------DNQMMD------------------GFHVDLAYVAYHATMVAIQALIPPMFTGFGCMSESTEEIVSRWYSTEFLRCEPIPSPLPSENIENDFMKDMRLASMEDNLDLIF 395
BLAST of NO04G02060 vs. NCBI_GenBank
Match: ETI56840.1 (hypothetical protein F443_00774 [Phytophthora parasitica P1569] >ETM56301.1 hypothetical protein L914_00707 [Phytophthora parasitica] >ETO85574.1 hypothetical protein F444_00775 [Phytophthora parasitica P1976] >ETP54618.1 hypothetical protein F442_00722 [Phytophthora parasitica P10297]) HSP 1 Score: 91.3 bits (225), Expect = 1.200e-14 Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 195 GEEEVFGFYEKEEGDKTEALKGGGDLERM--------RRQHRALSAECRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNK 358 G +E+ G+ E + + G E++ +S + H+L+ L V P+ GP + + Y DQV L T++V L+ G LR LLPHEYFFLR H+ L +D L+G+S+ ALR MR GM++LL Q G+W++ + + + N+ Sbjct: 214 GAKELLGWNPAESSPPIDNMNGSSIYEQLTSALVLWHHSNALGISIGFTLPHLLQHLLLVYPYKGPGDLSPQEYEDQVHLVTTLVFVLTNHGRLRCETNLLPHEYFFLRHHIVYHLTQQDAALLGESLRALRCFEGSANLVQMRRGMAYLLLTQREDGSWVNESLQNDPNQ 384
BLAST of NO04G02060 vs. NCBI_GenBank
Match: ETI56841.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETM56302.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO85575.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP54619.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 91.3 bits (225), Expect = 1.200e-14 Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 195 GEEEVFGFYEKEEGDKTEALKGGGDLERM--------RRQHRALSAECRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNK 358 G +E+ G+ E + + G E++ +S + H+L+ L V P+ GP + + Y DQV L T++V L+ G LR LLPHEYFFLR H+ L +D L+G+S+ ALR MR GM++LL Q G+W++ + + + N+ Sbjct: 214 GAKELLGWNPAESSPPIDNMNGSSIYEQLTSALVLWHHSNALGISIGFTLPHLLQHLLLVYPYKGPGDLSPQEYEDQVHLVTTLVFVLTNHGRLRCETNLLPHEYFFLRHHIVYHLTQQDAALLGESLRALRCFEGSANLVQMRRGMAYLLLTQREDGSWVNESLQNDPNQ 384
BLAST of NO04G02060 vs. NCBI_GenBank
Match: ETK96618.1 (hypothetical protein L915_00720 [Phytophthora parasitica] >ETL49981.1 hypothetical protein L916_00714 [Phytophthora parasitica] >ETP26622.1 hypothetical protein F441_00762 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 89.4 bits (220), Expect = 4.500e-14 Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 195 GEEEVFGFYEKEEGDKTEALKGGGDLERM--------RRQHRALSAECRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNK 358 G +E+ G+ E + + G E++ +S + H+L+ L V P+ GP + + Y DQV L T++V L+ G LR LLPHEYFFLR H+ L ++ L+G+S+ ALR MR GM++LL Q G+W++ + + + N+ Sbjct: 214 GAKELLGWNPAESSPPIDNMNGSSIYEQLTSALVLWHHSNALGISIGFTLPHLLQHLLLVYPYKGPGDLSPQEYEDQVHLVTTLVFVLTNHGRLRCETNLLPHEYFFLRHHIVYHLTQQNAALLGESLRALRCFEGSANLVQMRRGMAYLLLTQREDGSWVNESLQNDPNQ 384
BLAST of NO04G02060 vs. NCBI_GenBank
Match: XP_008890330.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETK96619.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL49982.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN24242.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETP26623.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 89.4 bits (220), Expect = 4.500e-14 Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 195 GEEEVFGFYEKEEGDKTEALKGGGDLERM--------RRQHRALSAECRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNK 358 G +E+ G+ E + + G E++ +S + H+L+ L V P+ GP + + Y DQV L T++V L+ G LR LLPHEYFFLR H+ L ++ L+G+S+ ALR MR GM++LL Q G+W++ + + + N+ Sbjct: 214 GAKELLGWNPAESSPPIDNMNGSSIYEQLTSALVLWHHSNALGISIGFTLPHLLQHLLLVYPYKGPGDLSPQEYEDQVHLVTTLVFVLTNHGRLRCETNLLPHEYFFLRHHIVYHLTQQNAALLGESLRALRCFEGSANLVQMRRGMAYLLLTQREDGSWVNESLQNDPNQ 384
BLAST of NO04G02060 vs. NCBI_GenBank
Match: ETM03054.1 (hypothetical protein L917_00677 [Phytophthora parasitica]) HSP 1 Score: 89.4 bits (220), Expect = 4.500e-14 Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 195 GEEEVFGFYEKEEGDKTEALKGGGDLERM--------RRQHRALSAECRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNK 358 G +E+ G+ E + + G E++ +S + H+L+ L V P+ GP + + Y DQV L T++V L+ G LR LLPHEYFFLR H+ L ++ L+G+S+ ALR MR GM++LL Q G+W++ + + + N+ Sbjct: 214 GAKELLGWNPAESSPPIDNMNGSSIYEQLTSALVLWHHSNALGISIGFTLPHLLQHLLLVYPYKGPGDLSPQEYEDQVHLVTTLVFVLTNHGRLRCETNLLPHEYFFLRHHIVYHLTQQNAALLGESLRALRCFEGSANLVQMRRGMAYLLLTQREDGSWVNESLQNDPNQ 384
BLAST of NO04G02060 vs. NCBI_GenBank
Match: ETM03055.1 (hypothetical protein, variant 1 [Phytophthora parasitica]) HSP 1 Score: 89.4 bits (220), Expect = 4.500e-14 Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 0 Query: 195 GEEEVFGFYEKEEGDKTEALKGGGDLERM--------RRQHRALSAECRVVHVLKWLPTVRPFLGPTLVDTERYRDQVLLATSVVGALSRGGELRIPALLLPHEYFFLREHLAVQLLNRDVLLVGKSIDALRVLGSHDENPMMRAGMSFLLGAQARAGNWLSSTFRAEGNK 358 G +E+ G+ E + + G E++ +S + H+L+ L V P+ GP + + Y DQV L T++V L+ G LR LLPHEYFFLR H+ L ++ L+G+S+ ALR MR GM++LL Q G+W++ + + + N+ Sbjct: 214 GAKELLGWNPAESSPPIDNMNGSSIYEQLTSALVLWHHSNALGISIGFTLPHLLQHLLLVYPYKGPGDLSPQEYEDQVHLVTTLVFVLTNHGRLRCETNLLPHEYFFLRHHIVYHLTQQNAALLGESLRALRCFEGSANLVQMRRGMAYLLLTQREDGSWVNESLQNDPNQ 384 The following BLAST results are available for this feature:
BLAST of NO04G02060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02060 ID=NO04G02060|Name=NO04G02060|organism=Nannochloropsis oceanica|type=gene|length=2047bpback to top protein sequence of NO04G02060.1 >NO04G02060.1-protein ID=NO04G02060.1-protein|Name=NO04G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=643bpback to top Synonyms
Publications
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