NO04G02010, NO04G02010 (gene) Nannochloropsis oceanica

Overview
NameNO04G02010
Unique NameNO04G02010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1947
Alignment locationchr4:583595..585541 +

Link to JBrowse

Properties
Property NameValue
DescriptionWd repeat domain phosphoinositide-interacting protein 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:583595..585541 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR001680WD40_repeat
Homology
BLAST of NO04G02010 vs. NCBI_GenBank
Match: GAX96352.1 (Hypothetical protein PINS_004239 [Pythium insidiosum])

HSP 1 Score: 426.0 bits (1094), Expect = 1.400e-115
Identity = 219/382 (57.33%), Postives = 265/382 (69.37%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCPDNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFALGADG-GMXXXXXXXXXXXXXXXXXXXVRSGSLDNVXXXXXXXXXXEVKNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVRGLEAKTVVAFGAREQTLICVGADGSYMVSNFAKGGEAERVSYKKLV 382
            MSSM L+++Q+NELLFVGFNQD GCFACGTD+GF+I+N +P++ETF R F NGGIGIVEMLFR N+LALVGGGRNPR+PPNKVMIWDDHQ+R IGELSFRSEVKAVKLRRDRVVVVL  KIYVY F+DL L D + T+ NP+GL ALCP ++NTVLAC G+++G+VR+ELYD RK+TLI AHE+ELSQI LNL+GTRLAT+SDKGTLIR+FDT+SG+++QELRRG D                         HIFAL A+G G                      + S              E  N+ S  SFMR  L    P+YFSSEWSFAQ R  E +T+ AFGA + T++ VGADGS+  + F   GE +  SY K +
Sbjct:    1 MSSMLLSREQQNELLFVGFNQDAGCFACGTDSGFKIFNCDPFKETFHRDFSNGGIGIVEMLFRCNILALVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFADLKLVDHIETIANPKGLCALCPSSSNTVLACPGVSRGTVRIELYDLRKTTLITAHEAELSQICLNLEGTRLATSSDKGTLIRVFDTHSGQIMQELRRGADXXXXXXXXXXXXXXXXXXXXXXXXXHIFALTAEGSGTNGTFSTEQSSIAPAPQVHATTTASAAPYSARGGEDDGTE--NSKSSFSFMRGFL----PKYFSSEWSFAQFRVPETRTICAFGAEKNTIVVVGADGSFYKAVFDANGEXQNTSYSKFI 376          
BLAST of NO04G02010 vs. NCBI_GenBank
Match: CCA25003.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 425.2 bits (1092), Expect = 2.400e-115
Identity = 220/382 (57.59%), Postives = 260/382 (68.06%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCPDNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFALG-ADGGMXXXXXXXXXXXXXXXXXXXVRSGSLDNVXXXXXXXXXXEVKNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVRGLEAKTVVAFGAREQTLICVGADGSYMVSNFAKGGEAERVSYKKLV 382
            MSSM+L+++Q+NELLFVGFNQD GCFACGTD GF+IYN +P++ETF R F NGGIGIVEMLFR N+L +VGGGRNPRFPPNKVMIWDDHQN  IGELSFRSEVKAVKLRRDR+VVVL  KIYVY F+DL L D + T+ NPRGL +LCP  +NTVLAC G+++G+VR+ELYD+RK+TLI AHE+ELSQI LNLDGTRLATASDKGTLIR+FDT +G++LQELRRG DR                       VHIFAL  A  G                      S S                +N+ S  SFMR  L    P+YFSSEWSFAQ R  E +T+  FG  + T+I VGADGS+  + F   GE +  SY K +
Sbjct:    1 MSSMNLSREQQNELLFVGFNQDSGCFACGTDTGFKIYNCDPFKETFHREFTNGGIGIVEMLFRCNILTIVGGGRNPRFPPNKVMIWDDHQNCNIGELSFRSEVKAVKLRRDRIVVVLQNKIYVYNFADLKLVDHIETIVNPRGLCSLCPSPSNTVLACPGVSRGTVRIELYDARKTTLITAHEAELSQICLNLDGTRLATASDKGTLIRVFDTQNGQILQELRRGADRXXXXXXXXXXXXXXXXXXXXXXXVHIFALSEATAGTSILSGDTSSPSSPSLSGGQRFSNSTARTGEEEG------TENSKSSFSFMRGFL----PKYFSSEWSFAQFRVPETRTICTFGTEKNTIIVVGADGSFYKAIFDTNGECQNTSYSKFI 372          
BLAST of NO04G02010 vs. NCBI_GenBank
Match: XP_009519227.1 (hypothetical protein PHYSODRAFT_353896 [Phytophthora sojae] >EGZ23939.1 hypothetical protein PHYSODRAFT_353896 [Phytophthora sojae])

HSP 1 Score: 425.2 bits (1092), Expect = 2.400e-115
Identity = 221/389 (56.81%), Postives = 264/389 (67.87%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCPDNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFALGADGG--------MXXXXXXXXXXXXXXXXXXXVRSGSLDNVXXXXXXXXXXEVKNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVRGLEAKTVVAFGAREQTLICVGADGSYMVSNFAKGGEAERVSYKKLV 382
            MS M+L+++Q+NELLFVGFNQD GCFACGTD+GF+I+N +P++ETF R F NGGIGIVEMLFR N+LA+VGGGRNPR+PPNKVMIWDDHQ+R IGELSFRSEVKAVKLRRDRVVVVL  KIYVY FSDL L D + T+ NP+GL ALCP+ +NTVLAC G+ +G+VR+ELYD RK+TLI AHE+ELSQI LNLDGTRLATASDKGTLIRIFDT SG++ QELRRG D                         H+F+L A+G                              RSG  D              +N+ S LSFMR LL    P+YFSSEWSFAQ R  E +T+ AFG  + T++ VGADGS+  + F   GE +  SY K +
Sbjct:    1 MSVMNLSREQQNELLFVGFNQDSGCFACGTDSGFKIFNCDPFKETFHRDFSNGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLVDHIETIANPKGLCALCPNPSNTVLACPGVTRGTVRIELYDLRKTTLITAHEAELSQICLNLDGTRLATASDKGTLIRIFDTQSGQITQELRRGADXXXXXXXXXXXXXXXXXXXXXXXXXHVFSLTAEGSGHSFSSDPTTMGNVPSQSAPSHFSAGSAPRSGDDDG------------TENSKSSLSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGTEKNTIVVVGADGSFYKAVFDANGECQNTSYSKFI 373          
BLAST of NO04G02010 vs. NCBI_GenBank
Match: XP_024573067.1 (Uncharacterized conserved protein, contains WD40 repeats [Plasmopara halstedii] >CEG36698.1 Uncharacterized conserved protein, contains WD40 repeats [Plasmopara halstedii])

HSP 1 Score: 423.3 bits (1087), Expect = 9.000e-115
Identity = 220/384 (57.29%), Postives = 264/384 (68.75%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCPDNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFALGADGGMXXXXXXXXXXXXXXXXXXXVRSGSLDNVXXXXXXXXXXE---VKNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVRGLEAKTVVAFGAREQTLICVGADGSYMVSNFAKGGEAERVSYKKLV 382
            MS+M L+++Q+NELLFVGFNQD GCFACGTD GF+I+N +P++ETF R F NGGIGIVEMLFR N+LA+VGGGRNPR+P NKVMIWDDHQ+R IGELSFRSEVKAVKLRRDRVVVVL  KIYVY FSDL L D + TL NP+GL ALCP+ +NTVLAC G+ +G+VR+ELYD RK+TLI AHE+ELSQI LNLDGTRLATASDKGTLIRIFDT SG++ QELRRG D                         H+F+L A+G                     V S ++ +           E    +N+ S LSFMR LL    P+YFSSEWSFAQ R  E +T+ AFG  + T++ VGADGS+  + F   GE +  SY K +
Sbjct:    1 MSAMKLSREQQNELLFVGFNQDSGCFACGTDTGFKIFNCDPFKETFHRDFTNGGIGIVEMLFRCNILAIVGGGRNPRYPTNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLVDHIETLANPKGLCALCPNPSNTVLACPGVTRGTVRIELYDLRKTTLITAHEAELSQICLNLDGTRLATASDKGTLIRIFDTQSGQITQELRRGADXXXXXXXXXXXXXXXXXXXXXXXXXHVFSLTAEGS-------GQSFSSELNSMGNVPSHTMPSHFAAGSAPRNGEEDGTENSKSSLSFMRGLL----PKYFSSEWSFAQFRVPETRTICAFGMEKNTIVVVGADGSFYKAVFDANGECQNTSYSKFI 373          
BLAST of NO04G02010 vs. NCBI_GenBank
Match: XP_009035793.1 (hypothetical protein AURANDRAFT_12574, partial [Aureococcus anophagefferens] >EGB09752.1 hypothetical protein AURANDRAFT_12574, partial [Aureococcus anophagefferens])

HSP 1 Score: 419.9 bits (1078), Expect = 1.000e-113
Identity = 209/333 (62.76%), Postives = 254/333 (76.28%), Query Frame = 0
Query:   28 CGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCPDNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFALGADGGMXXXXXXXXXXXXXXXXXXXVRSGSLDNVXXXXXXXXXXEV-KNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVRGLEAKTVVAFGAREQTLICVGADG 360
            CGT++GFRIYNV+P++ETFRRVF  GG+G+VEMLFR NLLALVGGGR+PR+PPNKVMIWDDHQNRCIGELSFRS+VKAVKLRRDRVVVVL+TK+YVYRFSDL L DQ+NT PNPRGLVALCP  +N VLAC G+N+G VRVELYD+RKST+I AHES+L+++AL+ DG  +ATASDKGTL+R+FDT++G  L+ELRRG+DRA +YS+AF+A + F+ACSS KGTVHIF+LG  GG                     R    D         X  +   N  S LSF+R ++P +   Y  SEWSFAQV GL+A T+ AFGA   T++ VGADG
Sbjct:    1 CGTESGFRIYNVDPFKETFRRVFSGGGVGVVEMLFRCNLLALVGGGRSPRYPPNKVMIWDDHQNRCIGELSFRSDVKAVKLRRDRVVVVLATKVYVYRFSDLKLLDQINTQPNPRGLVALCPHPSNNVLACPGVNRGHVRVELYDARKSTIITAHESDLARLALSGDGALVATASDKGTLLRVFDTHTGAQLRELRRGVDRAAVYSIAFDAEAKFLACSSDKGTVHIFSLGDGGG--------------------ARRVDGDPAPRAAPPAXAADAPANARSNLSFLRRVIPGLASSYLESEWSFAQVHGLDAPTLCAFGAEPGTVVVVGADG 313          
BLAST of NO04G02010 vs. NCBI_GenBank
Match: GAQ85315.1 (WD40 repeat-like superfamily protein [Klebsormidium nitens])

HSP 1 Score: 413.7 bits (1062), Expect = 7.200e-112
Identity = 230/378 (60.85%), Postives = 285/378 (75.40%), Query Frame = 0
Query:   12 NELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCPDNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFALG-----ADGGMXXXXXXXXXXXXXXXXXXXVRSGSLDNVXXXXXXXXXXEVKNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVR-GLEAKTVVAFGAREQTLICVGADGSYMVSNF--AKGGEAERVSYKKLV 382
            +ELL VGFNQDYGCFACGTD+GFRIYN +P++ETFRR F NGGIG+VEMLFR N+LA+VGGG+NPR+PPNKVMIWDDHQ+RCIGEL+FRSEV+AV+LRRDR+VVVL  KIYVY F+DL L  Q+ T+ NP+GL AL P +N+TVLAC G+++G VRVELYD +K+  I AHES L+  AL LDGT+LATAS KGTL+R+F T  G  LQE RRG DRAEIYSLAF+  + ++A SS KGT+H+FA+G     +  G   XXXXXXXXXXXXXXXXXV  G+  N            V+N+ S L+ ++ +L    P+YFSSEWS AQ     EAK++VAFG ++ TLI VGADGS+   +F    GGE  ++ YKK +
Sbjct:   19 SELLSVGFNQDYGCFACGTDSGFRIYNCDPFKETFRREFNNGGIGLVEMLFRCNILAIVGGGKNPRYPPNKVMIWDDHQSRCIGELAFRSEVRAVRLRRDRIVVVLEHKIYVYNFADLKLLHQIETIANPKGLCALSPASNSTVLACPGLHRGQVRVELYDQKKTRFIAAHESALACFALTLDGTKLATASSKGTLVRLFSTADGSKLQEFRRGADRAEIYSLAFSPDARWLAVSSDKGTIHVFAIGRPDDASADGSAAXXXXXXXXXXXXXXXXXVNGGAQAN----------GPVRNSMSSLALLKGVL----PKYFSSEWSLAQYHLPEEAKSIVAFGPQKHTLIIVGADGSFHKVSFEPTAGGECAQLEYKKFM 382          
BLAST of NO04G02010 vs. NCBI_GenBank
Match: CBJ49288.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 386.0 bits (990), Expect = 1.600e-103
Identity = 183/230 (79.57%), Postives = 210/230 (91.30%), Query Frame = 0
Query:    1 MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCPDNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAE 231
            MSSMSL+ +Q+NELLFVGFNQDYGCFACGTDNGFRIYNV+P+RETFRRVF NGGIGIVEMLFR NLLALVGGGRNPR+PPNKVMIWDDHQ+RCIGELSFRSEVKAV+LRRDRVVVVL+ +IYVYRFSDLHL D++NT+ N +GLVALC D +N VLAC GI++G V VELYD R+STLIPAHESEL+Q+AL++DG  +ATAS +GTL+R+FDT +G LL ELRRGMDRAE
Sbjct:    1 MSSMSLSNNQKNELLFVGFNQDYGCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGISRGHVNVELYDLRRSTLIPAHESELAQLALSMDGKMVATASSRGTLLRVFDTDTGSLLHELRRGMDRAE 230          
BLAST of NO04G02010 vs. NCBI_GenBank
Match: XP_024539213.1 (autophagy-related protein 18d [Selaginella moellendorffii])

HSP 1 Score: 375.9 bits (964), Expect = 1.700e-100
Identity = 198/375 (52.80%), Postives = 256/375 (68.27%), Query Frame = 0
Query:   11 RNELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCP-DNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFALGADGGMXXXXXXXXXXXXXXXXXXXVRSGSLDNVXXXXXXXXXXEVKNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVR-GLEAKTVVAFGAREQTLICVGADGSYMVSNF--AKGGEAERVSYKKLV 382
            ++ LL VG+NQDYGCFACGT+ GFRIYN EP++ETFRR F +GGI IVEMLFR N+LALVGGG NP++ PNKVMIWDDHQ+RCIGELSFRS+V+A++LRRDRVVVVL  KIYVY FSDL L  Q+ T+ NPRGL AL P  +N+ VLAC G++KG VRVE Y  RK+  I AH+S L+ +AL  DG  LATAS KGTLIR+++T  G  LQE+RRG DRA+IYS+AF+ ++ ++  SS KGT+H+F+L                         V + + +               N  S LSFMR +L    P+YFSSEWSFAQ R  +E++++VAFG ++ T++ V ++GS+   +F    GGE  +  Y K V
Sbjct:   37 KHGLLSVGYNQDYGCFACGTETGFRIYNCEPFKETFRREFSHGGIAIVEMLFRCNILALVGGGANPKYLPNKVMIWDDHQSRCIGELSFRSDVRAIRLRRDRVVVVLEHKIYVYNFSDLKLLHQVETIGNPRGLCALSPASSNSVVLACPGLHKGQVRVEQYGLRKTKFISAHDSHLACLALTFDGRLLATASIKGTLIRVYNTLDGTQLQEVRRGADRADIYSIAFSTTAQWLVVSSDKGTIHVFSLKVPA-----------EADAAESTTAVAAATANQDAGSPESPIKFASGNPGSTLSFMRGVL----PKYFSSEWSFAQFRLPVESRSIVAFGPQKNTVLIVSSEGSFYRCSFDPVNGGEMIQQEYAKFV 396          
BLAST of NO04G02010 vs. NCBI_GenBank
Match: XP_024531029.1 (autophagy-related protein 18d [Selaginella moellendorffii])

HSP 1 Score: 375.2 bits (962), Expect = 2.800e-100
Identity = 198/375 (52.80%), Postives = 255/375 (68.00%), Query Frame = 0
Query:   11 RNELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCP-DNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFALGADGGMXXXXXXXXXXXXXXXXXXXVRSGSLDNVXXXXXXXXXXEVKNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVR-GLEAKTVVAFGAREQTLICVGADGSYMVSNF--AKGGEAERVSYKKLV 382
            ++ LL VG+NQDYGCFACGT+ GFRIYN EP++ETFRR F +GGI IVEMLFR N+LALVGGG NP++ PNKVMIWDDHQ+RCIGELSFRS+V+A++LRRDRVVVVL  KIYVY FSDL L  Q+ T+ NPRGL AL P  +N+ VLAC G++KG VRVE Y  RK+  I AH+S L+ +AL  DG  LATAS KGTLIR+++T  G  LQE+RRG DRA+IYS+AF+ ++ ++  SS KGT+H+F+L                         V +   +               N  S LSFMR +L    P+YFSSEWSFAQ R  +E++++VAFG ++ T++ V ++GS+   +F    GGE  +  Y K V
Sbjct:   37 KHGLLSVGYNQDYGCFACGTETGFRIYNCEPFKETFRREFSHGGIAIVEMLFRCNILALVGGGANPKYLPNKVMIWDDHQSRCIGELSFRSDVRAIRLRRDRVVVVLEHKIYVYNFSDLKLLHQVETIGNPRGLCALSPASSNSVVLACPGLHKGQVRVEQYGLRKTKFISAHDSHLACLALTFDGRLLATASIKGTLIRVYNTLDGTQLQEVRRGADRADIYSIAFSTTAQWLVVSSDKGTIHVFSLKVPA-----------EADAAESTSAVAAAPANQDAGSPESPIKFASGNPGSTLSFMRGVL----PKYFSSEWSFAQFRLPVESRSIVAFGPQKNTVLIVSSEGSFYRCSFDPVNGGEMIQQEYAKFV 396          
BLAST of NO04G02010 vs. NCBI_GenBank
Match: ABR18228.1 (unknown [Picea sitchensis])

HSP 1 Score: 371.7 bits (953), Expect = 3.100e-99
Identity = 196/376 (52.13%), Postives = 254/376 (67.55%), Query Frame = 0
Query:    9 DQRNELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVFPNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCPDNNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLATASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKGTVHIFALGADGGMXXXXXXXXXXXXXXXXXXXVRSGSLDNVXXXXXXXXXXEVKNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVRGLEA-KTVVAFGAREQTLICVGADGSYMVSNF--AKGGEAERVSYKKLV 382
            ++++ LL+V FNQD+GCFACGT+ GF++YN +P+RETFRR F NGGIG+VEMLFR N+LALVGGG NP++PPNKVMIWDDHQ+RCIGELSFRSEV+AVKLRRDR+VVVL  KIYVY F DL L  Q+ T+ NP+GL  +    N+ VLAC G+++G +RVE Y  +++  I AH+S ++  AL LDG+ LAT+S KGTLIRIF+T     LQE+RRG DRAEIYSLAF+++  ++A SS KGT+HIF      G+                     +GS  N+             N  S LSFMR +L    PRYFSS+WSFAQ    E  + +VAFG ++ T++ VG DGS+    F    GGE E+  Y + +
Sbjct:   36 NEKSSLLYVSFNQDFGCFACGTEQGFQVYNCDPFRETFRRDFNNGGIGVVEMLFRCNILALVGGGSNPQYPPNKVMIWDDHQSRCIGELSFRSEVRAVKLRRDRIVVVLEHKIYVYNFVDLKLLHQIETMANPKGLCCVSHAPNSFVLACPGLHRGQMRVEHYGLKRTKFITAHDSRIACFALTLDGSLLATSSTKGTLIRIFNTLDATRLQEVRRGADRAEIYSLAFSSNHQWLAVSSDKGTIHIF------GLNVPRTGEDSRSVDATQSLPGTNGSGGNLVIPSPGG------NPGSSLSFMRGVL----PRYFSSQWSFAQFHLPEGLQFLVAFGHQKNTIVIVGLDGSFYRCAFDPVNGGEMEQKEYARFL 395          
The following BLAST results are available for this feature:
BLAST of NO04G02010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX96352.11.400e-11557.33Hypothetical protein PINS_004239 [Pythium insidios... [more]
CCA25003.12.400e-11557.59conserved hypothetical protein [Albugo laibachii N... [more]
XP_009519227.12.400e-11556.81hypothetical protein PHYSODRAFT_353896 [Phytophtho... [more]
XP_024573067.19.000e-11557.29Uncharacterized conserved protein, contains WD40 r... [more]
XP_009035793.11.000e-11362.76hypothetical protein AURANDRAFT_12574, partial [Au... [more]
GAQ85315.17.200e-11260.85WD40 repeat-like superfamily protein [Klebsormidiu... [more]
CBJ49288.11.600e-10379.57conserved unknown protein [Ectocarpus siliculosus][more]
XP_024539213.11.700e-10052.80autophagy-related protein 18d [Selaginella moellen... [more]
XP_024531029.12.800e-10052.80autophagy-related protein 18d [Selaginella moellen... [more]
ABR18228.13.100e-9952.13unknown [Picea sitchensis][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009601NSK009601Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02010.1NO04G02010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100009g91gene1981Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02010.1NO04G02010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02010 ID=NO04G02010|Name=NO04G02010|organism=Nannochloropsis oceanica|type=gene|length=1947bp
ACAGGGAGTACTCCTGCTGGTGCTTCCAGTCTTCGCCCGCTGTCTTCCCT
ACGCAAGCGGAAGCCCAACCAAGGAAGCTTCTCCTCTCAACCCTCTTACT
TTCTTCGCAGTCGGCCTGATCGTTGCGTCTGCCTGTATACCTGAATTCCT
CGAACAAAAAAGACGGACTTCTAACAAGGTACCGAGCAAGCCGCATCAAC
CTCAGCTTTTCACCTGCACGTGCACTTGCGTCGAAAAAATGTCGTCCATG
TCGCTGGCGCAAGACCAGCGGAACGAACTGCTTTTCGTGGGGTTCAATCA
GGACTATGGATGCTTTGCTTGCGGGACTGACAATGGCTTTCGgtacgtgt
caaacgcaatggaaagagaaagagaaatgttatgcatttgcggacaattg
ggtttgcggctcgctcgcttttgatagtatggaacatgagattacatccc
atttcctctgcacttcttccgtcctcttactgtttgcctcgccggcacat
gcagcttctttgcagcgtccgaaaattgtgtcgttacgctgtccagtagc
gtcattcatcggccgcatgcccggccatcacgccaccagttcctcctcta
cacccaaagtccactcacatactcttccacccgaccaacccctcccatca
ctttcactttcacgcagCATCTACAACGTCGAACCATACCGCGAGACCTT
CCGCCGTGTTTTTCCCAATGGTGGAATCGGCATCGTCGAAATGCTTTTCC
GGACCAACCTTCTTGCCCTCGTTGGCGGTGGCCGCAATCCCCGCTTTCCC
CCCAACAAAGTCATGATCTGGGATGATCATCAGAACAGATGCATCGGCGA
ACTGAGCTTCCGCAGTGAAGTCAAAGCAGTCAAGCTCCGTCGGGACCGAG
TTGTCGTCGTGTTGTCAACCAAAATTTATGTCTACCGCTTTTCGGACCTG
CATTTGCAAGATCAGATGAACACCTTGCCCAACCCCCGAGGCCTCGTGGC
CCTCTGCCCGGACAACAACAACACAGTCCTCGCCTGCCTTGGGATTAATA
AAGGATCAGTCCGTGTTGAGCTGTATGACAGCAGGAAGAGCACGCTAATC
CCGGCGCATGAATCGGAGCTGTCGCAGATCGCCTTGAACTTAGATGGGAC
CCGCTTGGCGACTGCCTCGGATAAGGGGACATTGATTCGGATTTTCGACA
CGTACTCCGGGGAGTTATTGCAAGAATTGAGAAGGGGCATGGATAGAGCT
GAGATTTATTCCCTGGCGTTCAATGCCTCGTCGACATTTGTGGCGTGTTC
GTCGTGTAAAGGCACGGTACATATTTTTGCGTTAGGCGCCGATGGAGGGA
TGAATAGTAGTAGTGGTTCTGGAGGAGGGGGAGGAGGAGGAGGGAGGCAA
GGAGGAGTGGTCCGTTCGGGGTCTTTAGATAATGTCGGGGTTGGGGGAGG
AGGGGTGGGAGGGGATGAGGTGAAGAACACAACATCAGGGCTTTCTTTCA
TGCGCAATTTGTTGCCGCAGATGACTCCAAGGTATTTTTCCTCGGAATGG
AGTTTCGCTCAGGTGCGAGGGTTGGAAGCCAAGACAGTCGTGGCGTTCGG
TGCTCGAGAGCAGACGTTGATTTGTGTGGGGGCAGATGGCTCGTACATGG
TGTCGAATTTTGCTAAGGGAGGGGAGGCAGAGCGGGTTTCGTACAAGAAA
CTCGTCAAATCTGCAGAGGAGGAAGATGAGGATCACTTTGCGACTACTCC
TTCGTCTTCGTCAGGTGGGGGATTGCCTCCTCCTCCATCGTCAACGTCGT
TACCGCCGCCGAGGGGGAATATGGGTACGGCTAATGTGAATGGCAGCGAT
GCAGGGCCGTTGCAAGCAATATCATGAAGTGAAAGAGAAGAAATAATCGC
CTGTTGAAGTGTCTTGTTATTGGCATGTATTTGGTAGTAATATGGGG
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protein sequence of NO04G02010.1

>NO04G02010.1-protein ID=NO04G02010.1-protein|Name=NO04G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=438bp
MSSMSLAQDQRNELLFVGFNQDYGCFACGTDNGFRIYNVEPYRETFRRVF
PNGGIGIVEMLFRTNLLALVGGGRNPRFPPNKVMIWDDHQNRCIGELSFR
SEVKAVKLRRDRVVVVLSTKIYVYRFSDLHLQDQMNTLPNPRGLVALCPD
NNNTVLACLGINKGSVRVELYDSRKSTLIPAHESELSQIALNLDGTRLAT
ASDKGTLIRIFDTYSGELLQELRRGMDRAEIYSLAFNASSTFVACSSCKG
TVHIFALGADGGMNSSSGSGGGGGGGGRQGGVVRSGSLDNVGVGGGGVGG
DEVKNTTSGLSFMRNLLPQMTPRYFSSEWSFAQVRGLEAKTVVAFGAREQ
TLICVGADGSYMVSNFAKGGEAERVSYKKLVKSAEEEDEDHFATTPSSSS
GGGLPPPPSSTSLPPPRGNMGTANVNGSDAGPLQAIS*
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Synonyms
Publications