NO04G01950, NO04G01950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01950 vs. NCBI_GenBank
Match: EWM28575.1 (Membrane insertion protein, OxaA/YidC [Nannochloropsis gaditana]) HSP 1 Score: 623.2 bits (1606), Expect = 6.600e-175 Identity = 332/442 (75.11%), Postives = 367/442 (83.03%), Query Frame = 0 Query: 48 MVVATLLFCLDFTMAFVPSASRLARPHGAVVAH----RSSSSGSCSLRMILNPHDVMGHADPAWLSHVFQGVADAAVATLDTTTATVDAVADAAEKEPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFARNPIVIDVDVDPEDLGYDPSTVVMSFEDMMAEAQQNALPSREPKRKRPTPSAAGFTLAAKGSDSRSSISDGFEGREGGNGDEQEGGVGSKIEEREKAGVDA 486 +++A+LLF + AFVP A+R RP V+ ++ G+ +LRM+L PHDV+ H DPAWLSHVFQGVADAAV +LD T A VDA DAA KEPGFFDKFVN VMGAIE VH+ LVSLGVPGAYG AIILFT+GVKLALLPVTYKQ+ESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGP+YGQ RG DWL +NWV+ VP+LGWHDTIA+L+IP ILILTQSISQRLLTPPSDDPK AQTQR+LKYLP+MVGYFSLSVPSGLG+YWITNNLISTAIS++IKEKFA+ PIVIDVDVDPEDLGYDPSTV M FE+MMAEA +NALPS +PKR RPTPS S S+ EGG DE+ G VG EEREKAGV+A Sbjct: 65 LLMASLLFTSEVVTAFVPVATR--RPDLLHVSRPPFPSRATPGTRALRMVLQPHDVVTHLDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPEDLGYDPSTVAMGFEEMMAEATRNALPSEQPKRDRPTPS------------SLLKASESVVAEEGGKRDEEAGRVG---EEREKAGVEA 489
BLAST of NO04G01950 vs. NCBI_GenBank
Match: CEL98483.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 268.5 bits (685), Expect = 4.100e-68 Identity = 144/340 (42.35%), Postives = 220/340 (64.71%), Query Frame = 0 Query: 111 VFQGVADAAVATLDTTTATVDAVADAAEKEPGFFDKFVNVVMGAIESVHAGLV-SLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQ--RGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFARNPIVIDV---DVDPEDLGY-----DPSTVV-MSFEDMMAEAQQNALPSREPKRKRPTPSAAG 439 V QGVA AA + V V + KEPG++D +V+ + I VH + G+P +G AII+FT +++ + P+T+ Q++ Q++QAL P +E+K ++GKN+ + LTA+LY++A+VNPLA LPA QIPIF+ LYRSL NLA + +E FLW+P+L GP +G + ++WLT W + P LGW T+ YL++P I +++Q ISQ +LTPP++D ++ + Q +LKYLP ++GYF+LSVPS L +YWI +N++ TAIS ++K+ F NPI D+ D+ PE+L D S ++ MS+ED++ +AQ +A+P R +R R G Sbjct: 87 VLQGVAQAAGEGGEAVGQAVQTVTEEVAKEPGWWDNYVSFLENMIYQVHHVMEDKFGIP-QFGWAIIVFTVLIRIFVFPITWNQMQGTQKIQALNPVVQEIKKRFGKNQQIQTLLTAQLYQEAKVNPLASILPAFVQIPIFLGLYRSLSNLAKDGQLSESFLWIPNLEGPTFGADPAQALNWLTTGWDGSNPPLGWEATLLYLTVPVIYVISQYISQAILTPPAEDEQSKRVQELLKYLPFLIGYFALSVPSALVIYWIASNVLVTAISWSLKQYFKSNPIEYDIKLDDIIPEELKNMLPTPDVSDILNMSWEDLLKDAQTHAVPPRASRRPREDDEILG 425
BLAST of NO04G01950 vs. NCBI_GenBank
Match: EWM28009.1 (Membrane insertion protein, OxaA/YidC [Nannochloropsis gaditana]) HSP 1 Score: 268.1 bits (684), Expect = 5.400e-68 Identity = 148/278 (53.24%), Postives = 183/278 (65.83%), Query Frame = 0 Query: 107 WLSHVFQGVADAAVATLDTTTATVDA---VADAAEKEPGFFDKFVNVVMGAIES----VHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVY--GQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPS--DDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLIST 374 WL QGVADAA AT T V+ + ++ +GAIE +H L G+ YG +II FT VKL LP+ YKQ+ES +MQA+ PK KE++ KY + L Q A+LY D VNPLAGCLPAL QIPIFI+LYR+L NLA ++ NEPFLWLP+L GP Y G GM+WL Q W PSLGWHDTIA+L++P ILI++QSISQ++L P + DDP A Q+Q ILK+LP MVGYFSL+VPSGLG+YWI NNLI+T Sbjct: 104 WLLQTLQGVADAAAATAPDTAGAVEGSKEMTXXXXXXXXXXXXWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITT 380
BLAST of NO04G01950 vs. NCBI_GenBank
Match: CBN75468.1 (Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus]) HSP 1 Score: 267.3 bits (682), Expect = 9.200e-68 Identity = 150/313 (47.92%), Postives = 191/313 (61.02%), Query Frame = 0 Query: 79 AHRSSSSGSCSLRMILNPHDVMGHADPAWLSHVFQGVADAAVATLDTTTATVDAVADAAEKEPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQ--QRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSD-----DPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFA 385 A R S+SG+ L+ +++P +M DPAWL V G+AD VA V GAI +H L S+GVP AYG +II FT VK P+TY+QL S +MQ L PK KEL+ +Y N NQ +LY+ VNPLAGCLPALAQIPIFI+LYRSL+NLA + E FLW+PSL GP + M W+ ++W + P LGWHDTIAY++IP IL++TQSIS R++ P D D A +Q I+K+LPLM+G+FSLSVPS LGLYWI NN ISTA S+ I+ + A Sbjct: 50 AARPSASGARGLQAMVDP-GMMHGVDPAWLHQVLTGIADGDVAAXXXXXXXXXXXXXFHP-----IQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIA 355
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005855715.1 (preprotein translocase subunit YidC [Nannochloropsis gaditana CCMP526] >EKU20637.1 preprotein translocase subunit YidC [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 263.8 bits (673), Expect = 1.000e-66 Identity = 147/278 (52.88%), Postives = 181/278 (65.11%), Query Frame = 0 Query: 107 WLSHVFQGVADAAVATLDTTTATVDA---VADAAEKEPGFFDKFVNVVMGAIES----VHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVY--GQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPS--DDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLIST 374 WL QGVADAA AT V+ ++ +GAIE +H L G+ YG +II FT VKL LP+ YKQ+ES +MQA+ PK KE++ KY + L Q A+LY D VNPLAGCLPAL QIPIFI+LYR+L NLA ++ NEPFLWLP+L GP Y G GM+WL Q W PSLGWHDTIA+L++P ILI++QSISQ++L P + DDP A Q+Q ILK+LP MVGYFSL+VPSGLG+YWI NNLI+T Sbjct: 66 WLLQTLQGVADAAAATXXXXXXAVEGSXXXXXXXXXXXXXXXXWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITT 342
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_009034706.1 (hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens] >EGB11161.1 hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens]) HSP 1 Score: 263.5 bits (672), Expect = 1.300e-66 Identity = 135/280 (48.21%), Postives = 189/280 (67.50%), Query Frame = 0 Query: 170 AYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSD--DPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFARNPIVIDVDVDPEDLGYDPST----VVMSFEDMMAEAQQNALPSREPKRKRPTPSAAGFTLAA 444 ++G +IILFT+ ++ + P+ + ES +R +AL P ++KD+YG+++ +N TAKLYE E NPLAGCLPA+AQIP+FIALYRS++NLA + E F ++P+L GP Y RG+ WLT NWV+ VPSLGWHDT+A+L++P L++TQSIS R+LTPP D D A R+LKYLPLM+G+FS +VPSGLGLYW+T+N+ S A SL K NP +DV++ +LG D + + + E+ + EA+ NA P R P R+ P T+ A Sbjct: 67 SWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKDRYGEDQQAVNLATAKLYEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFFFVPNLEGPTYDNGRGIQWLTDNWVDGVPSLGWHDTLAFLALPVALVITQSISMRVLTPPPDPNDKSAQNANRVLKYLPLMIGWFSANVPSGLGLYWMTSNVFSVAGSLGAKAYLKANPPKLDVEL--RELGLDDESAGVKLPATLEEALVEARVNARPDRTPLRRGVQPIPVFLTVDA 344
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005854940.1 (preprotein translocase subunit YidC, partial [Nannochloropsis gaditana CCMP526] >EKU21428.1 preprotein translocase subunit YidC, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 257.3 bits (656), Expect = 9.500e-65 Identity = 131/227 (57.71%), Postives = 165/227 (72.69%), Query Frame = 0 Query: 158 VHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVY--GQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPS--DDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIK 381 +H L G+ YG +II FT VKL LP+ YKQ+ES +MQA+ PK KE++ KY + L Q A+LY D VNPLAGCLPAL QIPIFI+LYR+L NLA ++ NEPFLWLP+L GP Y G GM+WL Q W PSLGWHDTIA+L++P ILI++QSISQ++L P + DDP A Q+Q ILK+LP MVGYFSL+VPSGLG+YWI NNLI+T ++ ++ Sbjct: 1 MHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 226
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005756386.1 (hypothetical protein EMIHUDRAFT_417253 [Emiliania huxleyi CCMP1516] >EOD03957.1 hypothetical protein EMIHUDRAFT_417253 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 256.9 bits (655), Expect = 1.200e-64 Identity = 132/242 (54.55%), Postives = 168/242 (69.42%), Query Frame = 0 Query: 140 EPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKY-GKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIK 381 + G+FD V I + L YG AII+FT G+KL L P+T +Q+ES Q+MQA+ P AK L++KY ++ A LN KLY+D EVNPLAGCLPA AQIP+FI LYRSL+ LA +PFLWLPSL GPV Q+G+ WLT+ WV P GW DT AYL +P +L+L+Q S LLTP SDDP AQ+Q ILK+LPLM+G+FSL+VPSGLGLYW+TNN+++TA +L I+ Sbjct: 89 QEGWFDLIV------IRPFEYAIEQLASVAGYGPAIIIFTLGIKLLLFPLTKQQIESTQKMQAIGPAAKALQEKYRDRDPARLNVELQKLYQDNEVNPLAGCLPAFAQIPLFIGLYRSLLLLAKEDKLEQPFLWLPSLEGPVADYQQGIGWLTE-WVNGAPKFGWADTAAYLVLPVLLVLSQYASMELLTPKSDDPAQAQSQAILKFLPLMIGWFSLNVPSGLGLYWLTNNIVTTASTLAIR 323
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005768666.1 (hypothetical protein EMIHUDRAFT_416100 [Emiliania huxleyi CCMP1516] >EOD16237.1 hypothetical protein EMIHUDRAFT_416100 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 256.9 bits (655), Expect = 1.200e-64 Identity = 132/242 (54.55%), Postives = 168/242 (69.42%), Query Frame = 0 Query: 140 EPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKY-GKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIK 381 + G+FD V I + L YG AII+FT G+KL L P+T +Q+ES Q+MQA+ P AK L++KY ++ A LN KLY+D EVNPLAGCLPA AQIP+FI LYRSL+ LA +PFLWLPSL GPV Q+G+ WLT+ WV P GW DT AYL +P +L+L+Q S LLTP SDDP AQ+Q ILK+LPLM+G+FSL+VPSGLGLYW+TNN+++TA +L I+ Sbjct: 89 QEGWFDLIV------IRPFEYAIEQLASVAGYGPAIIIFTLGIKLLLFPLTKQQIESTQKMQAIGPAAKALQEKYRDRDPARLNVELQKLYQDNEVNPLAGCLPAFAQIPLFIGLYRSLLLLAKEDKLEQPFLWLPSLEGPVADYQQGIGWLTE-WVNGAPKFGWADTAAYLVLPVLLVLSQYASMELLTPKSDDPAQAQSQAILKFLPLMIGWFSLNVPSGLGLYWLTNNIVTTASTLAIR 323
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005539121.1 (chloroplast membrane protein ALBINO3 or ARTEMIS [Cyanidioschyzon merolae strain 10D] >BAM83085.1 chloroplast membrane protein ALBINO3 or ARTEMIS [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 255.4 bits (651), Expect = 3.600e-64 Identity = 138/303 (45.54%), Postives = 191/303 (63.04%), Query Frame = 0 Query: 139 KEPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFARN-------PIVIDVDVD----PEDLGYDPSTVVMSFEDMMAEAQQNALPSREPKRK 431 ++ G ++ FV+++ I L +LGVPG+YG AII T VK P+ YKQ++S MQALAPK +EL+ +Y N LLN TA+LY++A+VNPL GCLP Q+P++IALYR+L+NLA ++ ++ F WLPSL GPV Q WL + P +GWHD IAYL +PC+L+++QSISQ++L PP DP+ Q IL++LP MVG+FSL+VPSGLGLYW+TNN++ST ++ IK A P +D VD PE +G+ P T + +A PS + KRK Sbjct: 185 QKAGLWNGFVHLIETIITGTGDTLAALGVPGSYGFAIIFLTIIVKAITFPLNYKQMKSTMAMQALAPKVRELQARYRDNPQLLNLETARLYQEAKVNPLTGCLPVFVQLPVWIALYRALMNLAADNRLDQGFFWLPSLEGPVRQGQGLSSWLFP-FQNGAPPIGWHDAIAYLVLPCLLVVSQSISQKILQPPVQDPQQQQANAILRFLPFMVGWFSLNVPSGLGLYWVTNNIVSTIQTIGIKRYLASKQPERVGAPRTLDGAVDERLNPEAMGFTPRT-----SETNGDAVDTEDPSTKSKRK 481 The following BLAST results are available for this feature:
BLAST of NO04G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01950 ID=NO04G01950|Name=NO04G01950|organism=Nannochloropsis oceanica|type=gene|length=1644bpback to top protein sequence of NO04G01950.1 >NO04G01950.1-protein ID=NO04G01950.1-protein|Name=NO04G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=486bpback to top Synonyms
Publications
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