NO04G01950, NO04G01950 (gene) Nannochloropsis oceanica

Overview
NameNO04G01950
Unique NameNO04G01950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1644
Alignment locationchr4:573729..575372 +

Link to JBrowse

Properties
Property NameValue
DescriptionMembrane insertion protein, OxaA/YidC
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:573729..575372 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0032977membrane insertase activity
GO:0003674molecular_function
Vocabulary: INTERPRO
TermDefinition
IPR001708Membrane_insert_OXA1/ALB3/YidC
Vocabulary: Biological Process
TermDefinition
GO:0008150biological_process
Homology
BLAST of NO04G01950 vs. NCBI_GenBank
Match: EWM28575.1 (Membrane insertion protein, OxaA/YidC [Nannochloropsis gaditana])

HSP 1 Score: 623.2 bits (1606), Expect = 6.600e-175
Identity = 332/442 (75.11%), Postives = 367/442 (83.03%), Query Frame = 0
Query:   48 MVVATLLFCLDFTMAFVPSASRLARPHGAVVAH----RSSSSGSCSLRMILNPHDVMGHADPAWLSHVFQGVADAAVATLDTTTATVDAVADAAEKEPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFARNPIVIDVDVDPEDLGYDPSTVVMSFEDMMAEAQQNALPSREPKRKRPTPSAAGFTLAAKGSDSRSSISDGFEGREGGNGDEQEGGVGSKIEEREKAGVDA 486
            +++A+LLF  +   AFVP A+R  RP    V+       ++ G+ +LRM+L PHDV+ H DPAWLSHVFQGVADAAV +LD T A VDA  DAA KEPGFFDKFVN VMGAIE VH+ LVSLGVPGAYG AIILFT+GVKLALLPVTYKQ+ESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGP+YGQ RG DWL +NWV+ VP+LGWHDTIA+L+IP ILILTQSISQRLLTPPSDDPK AQTQR+LKYLP+MVGYFSLSVPSGLG+YWITNNLISTAIS++IKEKFA+ PIVIDVDVDPEDLGYDPSTV M FE+MMAEA +NALPS +PKR RPTPS            S    S+     EGG  DE+ G VG   EEREKAGV+A
Sbjct:   65 LLMASLLFTSEVVTAFVPVATR--RPDLLHVSRPPFPSRATPGTRALRMVLQPHDVVTHLDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPEDLGYDPSTVAMGFEEMMAEATRNALPSEQPKRDRPTPS------------SLLKASESVVAEEGGKRDEEAGRVG---EEREKAGVEA 489          
BLAST of NO04G01950 vs. NCBI_GenBank
Match: CEL98483.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 268.5 bits (685), Expect = 4.100e-68
Identity = 144/340 (42.35%), Postives = 220/340 (64.71%), Query Frame = 0
Query:  111 VFQGVADAAVATLDTTTATVDAVADAAEKEPGFFDKFVNVVMGAIESVHAGLV-SLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQ--RGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFARNPIVIDV---DVDPEDLGY-----DPSTVV-MSFEDMMAEAQQNALPSREPKRKRPTPSAAG 439
            V QGVA AA    +     V  V +   KEPG++D +V+ +   I  VH  +    G+P  +G AII+FT  +++ + P+T+ Q++  Q++QAL P  +E+K ++GKN+ +   LTA+LY++A+VNPLA  LPA  QIPIF+ LYRSL NLA +   +E FLW+P+L GP +G    + ++WLT  W  + P LGW  T+ YL++P I +++Q ISQ +LTPP++D ++ + Q +LKYLP ++GYF+LSVPS L +YWI +N++ TAIS ++K+ F  NPI  D+   D+ PE+L       D S ++ MS+ED++ +AQ +A+P R  +R R      G
Sbjct:   87 VLQGVAQAAGEGGEAVGQAVQTVTEEVAKEPGWWDNYVSFLENMIYQVHHVMEDKFGIP-QFGWAIIVFTVLIRIFVFPITWNQMQGTQKIQALNPVVQEIKKRFGKNQQIQTLLTAQLYQEAKVNPLASILPAFVQIPIFLGLYRSLSNLAKDGQLSESFLWIPNLEGPTFGADPAQALNWLTTGWDGSNPPLGWEATLLYLTVPVIYVISQYISQAILTPPAEDEQSKRVQELLKYLPFLIGYFALSVPSALVIYWIASNVLVTAISWSLKQYFKSNPIEYDIKLDDIIPEELKNMLPTPDVSDILNMSWEDLLKDAQTHAVPPRASRRPREDDEILG 425          
BLAST of NO04G01950 vs. NCBI_GenBank
Match: EWM28009.1 (Membrane insertion protein, OxaA/YidC [Nannochloropsis gaditana])

HSP 1 Score: 268.1 bits (684), Expect = 5.400e-68
Identity = 148/278 (53.24%), Postives = 183/278 (65.83%), Query Frame = 0
Query:  107 WLSHVFQGVADAAVATLDTTTATVDA---VADAAEKEPGFFDKFVNVVMGAIES----VHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVY--GQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPS--DDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLIST 374
            WL    QGVADAA AT   T   V+    +             ++   +GAIE     +H  L   G+   YG +II FT  VKL  LP+ YKQ+ES  +MQA+ PK KE++ KY  +  L  Q  A+LY D  VNPLAGCLPAL QIPIFI+LYR+L NLA  ++ NEPFLWLP+L GP Y  G   GM+WL Q W    PSLGWHDTIA+L++P ILI++QSISQ++L P +  DDP A Q+Q ILK+LP MVGYFSL+VPSGLG+YWI NNLI+T
Sbjct:  104 WLLQTLQGVADAAAATAPDTAGAVEGSKEMTXXXXXXXXXXXXWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITT 380          
BLAST of NO04G01950 vs. NCBI_GenBank
Match: CBN75468.1 (Alb3 homolog, thylakoidal inner membrane insertase [Ectocarpus siliculosus])

HSP 1 Score: 267.3 bits (682), Expect = 9.200e-68
Identity = 150/313 (47.92%), Postives = 191/313 (61.02%), Query Frame = 0
Query:   79 AHRSSSSGSCSLRMILNPHDVMGHADPAWLSHVFQGVADAAVATLDTTTATVDAVADAAEKEPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQ--QRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSD-----DPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFA 385
            A R S+SG+  L+ +++P  +M   DPAWL  V  G+AD  VA                            V  GAI  +H  L S+GVP AYG +II FT  VK    P+TY+QL S  +MQ L PK KEL+ +Y  N    NQ   +LY+   VNPLAGCLPALAQIPIFI+LYRSL+NLA  +   E FLW+PSL GP +       M W+ ++W +  P LGWHDTIAY++IP IL++TQSIS R++ P  D     D   A +Q I+K+LPLM+G+FSLSVPS LGLYWI NN ISTA S+ I+ + A
Sbjct:   50 AARPSASGARGLQAMVDP-GMMHGVDPAWLHQVLTGIADGDVAAXXXXXXXXXXXXXFHP-----IQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWI-KDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIA 355          
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005855715.1 (preprotein translocase subunit YidC [Nannochloropsis gaditana CCMP526] >EKU20637.1 preprotein translocase subunit YidC [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 263.8 bits (673), Expect = 1.000e-66
Identity = 147/278 (52.88%), Postives = 181/278 (65.11%), Query Frame = 0
Query:  107 WLSHVFQGVADAAVATLDTTTATVDA---VADAAEKEPGFFDKFVNVVMGAIES----VHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVY--GQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPS--DDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLIST 374
            WL    QGVADAA AT       V+                  ++   +GAIE     +H  L   G+   YG +II FT  VKL  LP+ YKQ+ES  +MQA+ PK KE++ KY  +  L  Q  A+LY D  VNPLAGCLPAL QIPIFI+LYR+L NLA  ++ NEPFLWLP+L GP Y  G   GM+WL Q W    PSLGWHDTIA+L++P ILI++QSISQ++L P +  DDP A Q+Q ILK+LP MVGYFSL+VPSGLG+YWI NNLI+T
Sbjct:   66 WLLQTLQGVADAAAATXXXXXXAVEGSXXXXXXXXXXXXXXXXWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITT 342          
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_009034706.1 (hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens] >EGB11161.1 hypothetical protein AURANDRAFT_22501 [Aureococcus anophagefferens])

HSP 1 Score: 263.5 bits (672), Expect = 1.300e-66
Identity = 135/280 (48.21%), Postives = 189/280 (67.50%), Query Frame = 0
Query:  170 AYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSD--DPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFARNPIVIDVDVDPEDLGYDPST----VVMSFEDMMAEAQQNALPSREPKRKRPTPSAAGFTLAA 444
            ++G +IILFT+ ++  + P+ +   ES +R +AL P   ++KD+YG+++  +N  TAKLYE  E NPLAGCLPA+AQIP+FIALYRS++NLA +    E F ++P+L GP Y   RG+ WLT NWV+ VPSLGWHDT+A+L++P  L++TQSIS R+LTPP D  D  A    R+LKYLPLM+G+FS +VPSGLGLYW+T+N+ S A SL  K     NP  +DV++   +LG D  +    +  + E+ + EA+ NA P R P R+   P     T+ A
Sbjct:   67 SWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKDRYGEDQQAVNLATAKLYEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFFFVPNLEGPTYDNGRGIQWLTDNWVDGVPSLGWHDTLAFLALPVALVITQSISMRVLTPPPDPNDKSAQNANRVLKYLPLMIGWFSANVPSGLGLYWMTSNVFSVAGSLGAKAYLKANPPKLDVEL--RELGLDDESAGVKLPATLEEALVEARVNARPDRTPLRRGVQPIPVFLTVDA 344          
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005854940.1 (preprotein translocase subunit YidC, partial [Nannochloropsis gaditana CCMP526] >EKU21428.1 preprotein translocase subunit YidC, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 257.3 bits (656), Expect = 9.500e-65
Identity = 131/227 (57.71%), Postives = 165/227 (72.69%), Query Frame = 0
Query:  158 VHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVY--GQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPS--DDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIK 381
            +H  L   G+   YG +II FT  VKL  LP+ YKQ+ES  +MQA+ PK KE++ KY  +  L  Q  A+LY D  VNPLAGCLPAL QIPIFI+LYR+L NLA  ++ NEPFLWLP+L GP Y  G   GM+WL Q W    PSLGWHDTIA+L++P ILI++QSISQ++L P +  DDP A Q+Q ILK+LP MVGYFSL+VPSGLG+YWI NNLI+T  ++ ++
Sbjct:    1 MHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 226          
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005756386.1 (hypothetical protein EMIHUDRAFT_417253 [Emiliania huxleyi CCMP1516] >EOD03957.1 hypothetical protein EMIHUDRAFT_417253 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 256.9 bits (655), Expect = 1.200e-64
Identity = 132/242 (54.55%), Postives = 168/242 (69.42%), Query Frame = 0
Query:  140 EPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKY-GKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIK 381
            + G+FD  V      I      +  L     YG AII+FT G+KL L P+T +Q+ES Q+MQA+ P AK L++KY  ++ A LN    KLY+D EVNPLAGCLPA AQIP+FI LYRSL+ LA      +PFLWLPSL GPV   Q+G+ WLT+ WV   P  GW DT AYL +P +L+L+Q  S  LLTP SDDP  AQ+Q ILK+LPLM+G+FSL+VPSGLGLYW+TNN+++TA +L I+
Sbjct:   89 QEGWFDLIV------IRPFEYAIEQLASVAGYGPAIIIFTLGIKLLLFPLTKQQIESTQKMQAIGPAAKALQEKYRDRDPARLNVELQKLYQDNEVNPLAGCLPAFAQIPLFIGLYRSLLLLAKEDKLEQPFLWLPSLEGPVADYQQGIGWLTE-WVNGAPKFGWADTAAYLVLPVLLVLSQYASMELLTPKSDDPAQAQSQAILKFLPLMIGWFSLNVPSGLGLYWLTNNIVTTASTLAIR 323          
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005768666.1 (hypothetical protein EMIHUDRAFT_416100 [Emiliania huxleyi CCMP1516] >EOD16237.1 hypothetical protein EMIHUDRAFT_416100 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 256.9 bits (655), Expect = 1.200e-64
Identity = 132/242 (54.55%), Postives = 168/242 (69.42%), Query Frame = 0
Query:  140 EPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKY-GKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIK 381
            + G+FD  V      I      +  L     YG AII+FT G+KL L P+T +Q+ES Q+MQA+ P AK L++KY  ++ A LN    KLY+D EVNPLAGCLPA AQIP+FI LYRSL+ LA      +PFLWLPSL GPV   Q+G+ WLT+ WV   P  GW DT AYL +P +L+L+Q  S  LLTP SDDP  AQ+Q ILK+LPLM+G+FSL+VPSGLGLYW+TNN+++TA +L I+
Sbjct:   89 QEGWFDLIV------IRPFEYAIEQLASVAGYGPAIIIFTLGIKLLLFPLTKQQIESTQKMQAIGPAAKALQEKYRDRDPARLNVELQKLYQDNEVNPLAGCLPAFAQIPLFIGLYRSLLLLAKEDKLEQPFLWLPSLEGPVADYQQGIGWLTE-WVNGAPKFGWADTAAYLVLPVLLVLSQYASMELLTPKSDDPAQAQSQAILKFLPLMIGWFSLNVPSGLGLYWLTNNIVTTASTLAIR 323          
BLAST of NO04G01950 vs. NCBI_GenBank
Match: XP_005539121.1 (chloroplast membrane protein ALBINO3 or ARTEMIS [Cyanidioschyzon merolae strain 10D] >BAM83085.1 chloroplast membrane protein ALBINO3 or ARTEMIS [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 255.4 bits (651), Expect = 3.600e-64
Identity = 138/303 (45.54%), Postives = 191/303 (63.04%), Query Frame = 0
Query:  139 KEPGFFDKFVNVVMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPSLGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMVGYFSLSVPSGLGLYWITNNLISTAISLTIKEKFARN-------PIVIDVDVD----PEDLGYDPSTVVMSFEDMMAEAQQNALPSREPKRK 431
            ++ G ++ FV+++   I      L +LGVPG+YG AII  T  VK    P+ YKQ++S   MQALAPK +EL+ +Y  N  LLN  TA+LY++A+VNPL GCLP   Q+P++IALYR+L+NLA ++  ++ F WLPSL GPV   Q    WL   +    P +GWHD IAYL +PC+L+++QSISQ++L PP  DP+  Q   IL++LP MVG+FSL+VPSGLGLYW+TNN++ST  ++ IK   A         P  +D  VD    PE +G+ P T      +   +A     PS + KRK
Sbjct:  185 QKAGLWNGFVHLIETIITGTGDTLAALGVPGSYGFAIIFLTIIVKAITFPLNYKQMKSTMAMQALAPKVRELQARYRDNPQLLNLETARLYQEAKVNPLTGCLPVFVQLPVWIALYRALMNLAADNRLDQGFFWLPSLEGPVRQGQGLSSWLFP-FQNGAPPIGWHDAIAYLVLPCLLVVSQSISQKILQPPVQDPQQQQANAILRFLPFMVGWFSLNVPSGLGLYWVTNNIVSTIQTIGIKRYLASKQPERVGAPRTLDGAVDERLNPEAMGFTPRT-----SETNGDAVDTEDPSTKSKRK 481          
The following BLAST results are available for this feature:
BLAST of NO04G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28575.16.600e-17575.11Membrane insertion protein, OxaA/YidC [Nannochloro... [more]
CEL98483.14.100e-6842.35unnamed protein product [Vitrella brassicaformis C... [more]
EWM28009.15.400e-6853.24Membrane insertion protein, OxaA/YidC [Nannochloro... [more]
CBN75468.19.200e-6847.92Alb3 homolog, thylakoidal inner membrane insertase... [more]
XP_005855715.11.000e-6652.88preprotein translocase subunit YidC [Nannochlorops... [more]
XP_009034706.11.300e-6648.21hypothetical protein AURANDRAFT_22501 [Aureococcus... [more]
XP_005854940.19.500e-6557.71preprotein translocase subunit YidC, partial [Nann... [more]
XP_005756386.11.200e-6454.55hypothetical protein EMIHUDRAFT_417253 [Emiliania ... [more]
XP_005768666.11.200e-6454.55hypothetical protein EMIHUDRAFT_416100 [Emiliania ... [more]
XP_005539121.13.600e-6445.54chloroplast membrane protein ALBINO3 or ARTEMIS [C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009610NSK009610Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01950.1NO04G01950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578658gene_1985Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Alb3gene1987Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01950.1NO04G01950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01950 ID=NO04G01950|Name=NO04G01950|organism=Nannochloropsis oceanica|type=gene|length=1644bp
ATGGAGGGAGCAAAAAGCGAGCAGGGGGATATCAAGTCATCAAGTTGCTG
TGCGCCTGGCGGGTTACTTATGGAAGCAAGgtattgttcacggccctgtt
tcataggcggcatgcttctgcccgtgtccacatgcggctgtagcactggc
ctacacgacaattgatgaagtccgatcccgcattgcacacaaccctccct
catttccacttctctttttcatttcttatcatacgtacaacacactcgat
gcatcacataatacagAAGGATGATCATGAAGCAGCAGCAGGAGGGAATG
AGAAGAAGGGGATCAGGAGCAGTATGGATGGTGGTGGCGACGCTTCTGTT
TTGCCTCGACTTCACCATGGCATTTGTGCCCTCTGCTAGCCGCCTTGCCC
GCCCGCATGGCGCCGTCGTCGCCCATCGTAGCAGCAGCAGCGGCAGCTGC
AGCTTGCGGATGATCCTAAACCCGCACGACGTTATGGGGCACGCGGATCC
GGCCTGGCTCTCACATGTCTTCCAAGGTGTGGCGGACGCAGCAGTAGCGA
CCTTAGACACAACGACAGCCACCGTCGATGCTGTAGCCGACGCTGCTGAA
AAAGAACCGGGTTTTTTTGACAAGTTTGTTAATGTTGTCATGGGTGCCAT
TGAAAGCGTGCATGCTGGCTTGGTCTCGTTGGGCGTCCCAGGAGCGTATG
GAACGGCTATCATCTTATTCACCTCTGGGGTCAAGCTCGCCTTGCTGCCC
GTCACGTACAAGCAATTGGAGTCAGCCCAAAGAATGCAAGCCCTTGCGCC
AAAGGCCAAGGAGCTCAAAGACAAGTATGGTAAGAACAAGGCGTTGCTCA
ACCAGCTCACAGCCAAGCTGTACGAGGACGCGGAGGTGAACCCTCTGGCC
GGGTGCTTGCCTGCCCTCGCTCAAATCCCCATTTTTATCGCCCTGTACCG
ATCGTTGATCAACCTGGCGGGGAACAGTGATTTTAACGAGCCTTTCCTAT
GGTTGCCTAGTCTGGCAGGGCCCGTGTACGGCCAGCAAAGGGGAATGGAC
TGGTTGACGCAAAATTGGGTGGAAAACGTGCCCTCGCTGGGGTGGCATGA
CACAATTGCTTACCTGTCGATCCCATGTATTTTAATTTTGACGCAATCCA
TCTCCCAGCGGCTGTTGACACCTCCGAGCGACGACCCCAAGGCAGCGCAA
ACGCAAAGGATTTTGAAGTATTTGCCGTTAATGGTCGGTTATTTCTCGTT
AAGTGTTCCTTCGGGTTTGGGCTTGTACTGGATCACGAATAATTTGATTT
CGACAGCGATTTCTCTGACCATCAAAGAGAAATTTGCAAGGAATCCGATC
GTTATTGACGTGGATGTAGATCCGGAGGATTTGGGCTATGATCCCTCTAC
GGTGGTGATGTCGTTTGAAGACATGATGGCAGAGGCTCAACAGAATGCAT
TGCCCTCCCGAGAGCCGAAGCGGAAGAGGCCGACGCCTTCTGCAGCTGGG
TTTACGCTAGCGGCAAAGGGCAGTGATAGCCGTAGCAGTATAAGTGATGG
GTTTGAGGGGAGGGAGGGAGGAAATGGGGACGAGCAGGAGGGTGGGGTAG
GGTCCAAGATAGAGGAGAGAGAGAAAGCGGGAGTGGACGCATGA
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protein sequence of NO04G01950.1

>NO04G01950.1-protein ID=NO04G01950.1-protein|Name=NO04G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp
MEGAKSEQGDIKSSSCCAPGGLLMEARRMIMKQQQEGMRRRGSGAVWMVV
ATLLFCLDFTMAFVPSASRLARPHGAVVAHRSSSSGSCSLRMILNPHDVM
GHADPAWLSHVFQGVADAAVATLDTTTATVDAVADAAEKEPGFFDKFVNV
VMGAIESVHAGLVSLGVPGAYGTAIILFTSGVKLALLPVTYKQLESAQRM
QALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIF
IALYRSLINLAGNSDFNEPFLWLPSLAGPVYGQQRGMDWLTQNWVENVPS
LGWHDTIAYLSIPCILILTQSISQRLLTPPSDDPKAAQTQRILKYLPLMV
GYFSLSVPSGLGLYWITNNLISTAISLTIKEKFARNPIVIDVDVDPEDLG
YDPSTVVMSFEDMMAEAQQNALPSREPKRKRPTPSAAGFTLAAKGSDSRS
SISDGFEGREGGNGDEQEGGVGSKIEEREKAGVDA*
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Synonyms
Publications