NO04G01890, NO04G01890 (gene) Nannochloropsis oceanica

Overview
NameNO04G01890
Unique NameNO04G01890
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3444
Alignment locationchr4:547794..551237 -

Link to JBrowse

Properties
Property NameValue
DescriptionWw domain binding protein 4 (Formin binding protein 21)
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:547794..551237 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0042819vitamin B6 biosynthetic process
GO:0042823pyridoxal phosphate biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004359glutaminase activity
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR029062Class_I_gatase-like
IPR036236Znf_C2H2_sf
IPR000690Znf_C2H2_matrin
IPR013085Znf_U1-C
IPR002161PdxT/SNO
IPR003604Znf_U1
Homology
BLAST of NO04G01890 vs. NCBI_GenBank
Match: XP_005854524.1 (glutamine amidotransferase [Nannochloropsis gaditana CCMP526] >EKU21834.1 glutamine amidotransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 376.7 bits (966), Expect = 1.500e-100
Identity = 190/268 (70.90%), Postives = 210/268 (78.36%), Query Frame = 0
Query:    7 TAPCIGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQKDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDLEGAAAEGSLGAAGPVSAVFIRAPAILEAGPNVHVLARVKATPCAKARTCIEEVY--------------------------XXXXXXXXXXXXXXXXXXXXXXQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSL 249
            + PCIGILALQGAFEEH KI++ELGARTVEVRLP+DL+K+LDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKP+WGTCAGMILLSN+A+MQK GGQPLIGGLDVEVCRN+FGSQ+SSFEV+L LEGAAA GSLG+ GPVSAVFIRAPAILEAGP V VLARVKATPCA+AR C+EEVY                                                +EDG+MEV+VAVQQG LLATAFHPELTPERWWHQYF+S+
Sbjct:    7 SGPCIGILALQGAFEEHRKIVQELGARTVEVRLPDDLDKNLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPIWGTCAGMILLSNRAIMQKAGGQPLIGGLDVEVCRNFFGSQVSSFEVLLQLEGAAAAGSLGSRGPVSAVFIRAPAILEAGPGVEVLARVKATPCAQARHCVEEVYREQQKQREELLQREGRPSAPSPLVPTAASEDGARGRGRSGGEKTCMEREEDGRMEVVVAVQQGHLLATAFHPELTPERWWHQYFMSM 274          
BLAST of NO04G01890 vs. NCBI_GenBank
Match: EWM28536.1 (pyridoxal biosynthesis protein pdx2 [Nannochloropsis gaditana])

HSP 1 Score: 376.3 bits (965), Expect = 2.000e-100
Identity = 190/268 (70.90%), Postives = 209/268 (77.99%), Query Frame = 0
Query:    7 TAPCIGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQKDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDLEGAAAEGSLGAAGPVSAVFIRAPAILEAGPNVHVLARVKATPCAKARTCIEEVY--------------------------XXXXXXXXXXXXXXXXXXXXXXQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSL 249
            + PCIGILALQGAFEEH KI++ELGARTVEVRLP+DL+KDLDGLIIPGGESTAMAIVG RHGIFPKLKAFVQGGKP+WGTCAGMILLSN+A+MQK GGQPLIGGLDVEVCRN+FGSQ+SSFEV+L LEGAAA GSLG+ GPVSAVFIRAPAILEAGP V VLARVKATPCA+AR C+EEVY                                                +EDG+MEV+VAVQQG LLATAFHPELTPERWWHQYF+S+
Sbjct:    7 SGPCIGILALQGAFEEHRKIVQELGARTVEVRLPDDLDKDLDGLIIPGGESTAMAIVGARHGIFPKLKAFVQGGKPIWGTCAGMILLSNRAIMQKAGGQPLIGGLDVEVCRNFFGSQVSSFEVLLQLEGAAAAGSLGSRGPVSAVFIRAPAILEAGPGVEVLARVKATPCAQARHCVEEVYREQQKQREELLQREGRPSAPPPSVPTAASEDGARGRGRSGGEKTCMEREEDGRMEVVVAVQQGHLLATAFHPELTPERWWHQYFMSM 274          
BLAST of NO04G01890 vs. NCBI_GenBank
Match: EWM28611.1 (ww domain binding protein 4 (formin binding protein 21) [Nannochloropsis gaditana])

HSP 1 Score: 303.9 bits (777), Expect = 1.200e-78
Identity = 220/416 (52.88%), Postives = 258/416 (62.02%), Query Frame = 0
Query:  267 MSEYWRSTPKYCCKFCNVWMDDNTTSRRLHDGGARHKQAVEDFFKAKREAKRQGSLDDGEVSKELRAIEKAAQAQADLDAAMF-----------------------GIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPEGRYSVDGVFYLEGKHFPEKLVTGTRCEVWAEGEDEWREGRVARVHVTAVPNTTLVLRKFAVAFVKRKMAXXXXXXXXXXXXXXXXXXXXXXXXXXXEDITPDRIRMVEA-HLLGTVQRPLXXXXXXXXXXMDTGLGGWQTVSVRTFDEEAEKKASLKAIKAETKKRKKEDAEKRSKMIEEAMEGEDALSSYDPHNRGMYKGIDLNAAARGEGGREGE-VLLGEVGGATVDIDLGGDKDGPVAFK 658
            M++YW+STPK+CCKFCNVWMDDN TSRRLH+GGARHKQAVE+FFKA+REAKRQGS+ DGE+SKELR IEKAAQAQA+ DAAMF                          XXXXXXXXXXXXXXXXXXXXXXX                                     E EGRY+VDGV +LEGK    +LV GT C+VW E +D WRE  V+RV VTAVPNT+L LRKF+V    R+                             E +  DRIR+VE  H +G V   LXXXXXXXXXX  TGLGGWQTVSVR  DEEAE+KAS  A++A            R++M+ EAMEGEDA+SSYDPH RG+YKG+DL       GG EG   ++GEVGGA +++DLGGD+ GPVAF+
Sbjct:    1 MADYWKSTPKHCCKFCNVWMDDNKTSRRLHEGGARHKQAVEEFFKAQREAKRQGSIGDGELSKELREIEKAAQAQAEKDAAMFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSHRVRGDVDGWRDVKKEEREVNGGSEDVTGGSAAAEVEGRYTVDGVTFLEGKAVETRLVRGTPCQVWVEKDDAWREAIVSRVEVTAVPNTSLTLRKFSVILGARR----PDGGKEAREGQAAVTQGEEEAKEVEEGVLSDRIRLVEGEHSMGGVD-TLXXXXXXXXXXXXTGLGGWQTVSVRMVDEEAERKASEAAVRAXXXXXXXXXXXXRARMLAEAMEGEDAMSSYDPHGRGIYKGMDLKV-----GGTEGSGAIVGEVGGAALEVDLGGDQAGPVAFR 406          
BLAST of NO04G01890 vs. NCBI_GenBank
Match: CBJ32119.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 230.7 bits (587), Expect = 1.300e-56
Identity = 149/270 (55.19%), Postives = 185/270 (68.52%), Query Frame = 0
Query:   11 IGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQKDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDLEGAAAEGSLGA-------AGPVSAVFIRAPAILEAGPNVHVLARVKATPCAKARTCIE-------------------------EVYXXXXXXXXXXXXXXXXXXXXXXQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSL 249
            IGILALQGAF EH  ++ +LGA   EVRLP + E  LDG+++PGGESTAMA++GER G+FP+LK +V  G+PVWGTCAGMILLS+ A+MQK GGQ L+GGL+VE+CRNYFG+Q SSFEV LD   A   GS+G          P  AVFIRAPA+LEAGP V VL +V++ PC KA T ++                            XXXXXXXXXXXXXXXXXXXXXX      EV+VA+++G ++ TAFHPELT +  WH+YF+ +
Sbjct:   23 IGILALQGAFAEHSSLLSKLGADVREVRLPHEFE-GLDGIVLPGGESTAMALIGERWGVFPRLKQWVSEGRPVWGTCAGMILLSDHALMQKKGGQSLVGGLNVEICRNYFGAQTSSFEVPLD-TSALETGSVGKKDGGSANKNPYPAVFIRAPAVLEAGPGVDVLCKVRSRPCNKAVTVMKAQLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEVIVAIRKGNIVGTAFHPELTNDSRWHEYFVRI 290          
BLAST of NO04G01890 vs. NCBI_GenBank
Match: XP_010253632.1 (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX2 [Nelumbo nucifera])

HSP 1 Score: 214.2 bits (544), Expect = 1.300e-51
Identity = 126/245 (51.43%), Postives = 157/245 (64.08%), Query Frame = 0
Query:   11 IGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQKDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDL-EGAAAEGSLGAAGPVSA--VFIRAPAILEAGPNVHVLARV----KATPCAKARTCIEEVYXXXXXXXXXXXXXXXXXXXXXXQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSL 249
            +G+LALQG+F EH  ++R +G + +E+R PE L+ ++  LIIPGGEST MA + E H +FP L+ FV+ GKPVWGTCAG+I L+NKAV QK+GGQ LIGGLD  V RN+FGSQI SFE  L + E AA EG     GP S+  VFIRAPAILEAGP V VLA      K    +K+ T  +EV                       +   K +V+VAV+QG LLATAFHPELT +  WH YFL +
Sbjct:    3 VGVLALQGSFNEHIAVLRRIGVKGIEIRKPEQLQ-NVHALIIPGGESTTMAKLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKAVGQKEGGQELIGGLDCTVHRNFFGSQIQSFEAELSVPELAAKEG-----GPQSSRGVFIRAPAILEAGPEVEVLADYPIPSKKLTDSKSVTGNQEV-----------------------KIGSKDKVIVAVRQGNLLATAFHPELTADTRWHSYFLKM 218          
BLAST of NO04G01890 vs. NCBI_GenBank
Match: XP_010264707.1 (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX2 [Nelumbo nucifera])

HSP 1 Score: 210.7 bits (535), Expect = 1.400e-50
Identity = 120/238 (50.42%), Postives = 146/238 (61.34%), Query Frame = 0
Query:   11 IGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQKDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDLEGAAAEGSLGAAGPVSAVFIRAPAILEAGPNVHVLARVKATPCAKARTCIEEVYXXXXXXXXXXXXXXXXXXXXXXQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSL 249
            +G+LALQG+F EH   +R +G + VE+R PE L+ ++D LIIPGGEST MA + E H +FP LK FV+ GKPVWGTCAG+I L+NKA+ QK+GGQ LIGGLD  V RN+FGSQI SFE  L +   AA+   G       VFIRAPAILEAGP V VLA       AK  T                              + K +V+VAV+QG LL TAFHPELT +  WH YFL +
Sbjct:    3 VGVLALQGSFNEHIAALRRIGVKGVEIRKPEQLQ-NVDALIIPGGESTTMAKLAEYHNLFPALKEFVKMGKPVWGTCAGLIFLANKAIGQKEGGQELIGGLDCTVHRNFFGSQIQSFEAELPVPELAAKE--GGHESFRGVFIRAPAILEAGPEVEVLADYPVP--AKKLT-----------------DSKFAAGNQQETTESKGKVIVAVRQGNLLGTAFHPELTADTRWHSYFLKM 218          
BLAST of NO04G01890 vs. NCBI_GenBank
Match: XP_004251122.1 (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX2 [Solanum lycopersicum])

HSP 1 Score: 209.9 bits (533), Expect = 2.500e-50
Identity = 120/240 (50.00%), Postives = 148/240 (61.67%), Query Frame = 0
Query:   11 IGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQKDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDLEGAAAEGSLGAAGPVSAVFIRAPAILEAGPNVHVLARV--KATPCAKARTCIEEVYXXXXXXXXXXXXXXXXXXXXXXQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSL 249
            +G+LALQG+F EH  +++ LG + VEVR PE L  ++  LIIPGGEST MA + E H +FP L+ FVQ GKPVWGTCAG+I L+NKA  QK GGQ LIGGLD  V RN+FGSQI SFE  L +    AE   G      AVFIRAPAIL+ GP+V VL+ +   A     +   I++                         E GK +V+VAV+QG LLATAFHPELT +  WH YFL +
Sbjct:    3 VGVLALQGSFNEHIAVLKRLGVKGVEVRKPEQL-LNVSSLIIPGGESTTMAKLAELHNLFPALREFVQMGKPVWGTCAGLIFLANKATGQKTGGQKLIGGLDCTVHRNFFGSQIQSFETELPIPQVVAED--GGPPSFRAVFIRAPAILDVGPDVEVLSDIPLSAIETLNSNPAIQK--------------------EEESTESGK-KVIVAVKQGNLLATAFHPELTADTRWHSYFLKM 218          
BLAST of NO04G01890 vs. NCBI_GenBank
Match: XP_006340154.1 (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX2 [Solanum tuberosum])

HSP 1 Score: 209.9 bits (533), Expect = 2.500e-50
Identity = 122/240 (50.83%), Postives = 149/240 (62.08%), Query Frame = 0
Query:   11 IGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQKDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDLEGAAAEGSLGAAGPVS--AVFIRAPAILEAGPNVHVLARVKATPCAKARTCIEEVYXXXXXXXXXXXXXXXXXXXXXXQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSL 249
            +G+LALQG+F EH  +++ LG + VEVR PE L  ++  LIIPGGEST MA + E H +FP L+ FVQ GKPVWGTCAG+I L+N+A  QK GGQ LIGGLD  V RN+FGSQI SFE  L +    AE      GP S  AVFIRAPAIL+ GP+V VLA +         + IE +                        E GK +V+VAV+QG LLATAFHPELT +  WH YFL +
Sbjct:    3 VGVLALQGSFNEHIAVLKRLGVKGVEVRKPEQL-LNVSSLIIPGGESTTMAKLAELHNLFPALREFVQMGKPVWGTCAGLIFLANRATGQKTGGQKLIGGLDCTVHRNFFGSQIQSFETELPIPQVVAE----EGGPPSFRAVFIRAPAILDVGPDVEVLADIPL-------SAIETI-----------NSNPAIPKEEDSTESGK-KVIVAVKQGNLLATAFHPELTADTRWHSYFLKM 218          
BLAST of NO04G01890 vs. NCBI_GenBank
Match: XP_015058190.1 (PREDICTED: probable pyridoxal 5'-phosphate synthase subunit PDX2 [Solanum pennellii])

HSP 1 Score: 209.5 bits (532), Expect = 3.200e-50
Identity = 120/240 (50.00%), Postives = 147/240 (61.25%), Query Frame = 0
Query:   11 IGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQKDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDLEGAAAEGSLGAAGPVSAVFIRAPAILEAGPNVHVLARV--KATPCAKARTCIEEVYXXXXXXXXXXXXXXXXXXXXXXQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSL 249
            +G+LALQG+F EH  +++ LG + VEVR PE L  ++  LIIPGGEST MA + E H +FP L+ FVQ GKPVWGTCAG+I L+NKA  QK GGQ LIGGLD  V RN+FGSQI SFE  L +    AE   G      AVFIRAPAIL+ GP+V VL+ +   A     +   I+                          E GK +V+VAV+QG LLATAFHPELT +  WH YFL +
Sbjct:    3 VGVLALQGSFNEHIAVLKRLGVKGVEVRKPEQL-LNVSSLIIPGGESTTMAKLAELHNLFPALREFVQMGKPVWGTCAGLIFLANKATGQKTGGQKLIGGLDCTVHRNFFGSQIQSFETELPIPQVVAED--GGPPSFRAVFIRAPAILDVGPDVEVLSDIPLSAIETLNSNPAIQN--------------------EEESTESGK-KVIVAVKQGNLLATAFHPELTADTRWHSYFLKM 218          
BLAST of NO04G01890 vs. NCBI_GenBank
Match: PHT26825.1 (putative pyridoxal 5'-phosphate synthase subunit PDX2 [Capsicum baccatum])

HSP 1 Score: 209.1 bits (531), Expect = 4.200e-50
Identity = 118/241 (48.96%), Postives = 150/241 (62.24%), Query Frame = 0
Query:   11 IGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGLIIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQKDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDL-EGAAAEGSLGAAGPVS--AVFIRAPAILEAGPNVHVLARVKATPCAKARTCIEEVYXXXXXXXXXXXXXXXXXXXXXXQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSL 249
            +G+LALQG+F EH  +++ LG + V++R PE L+ ++  LIIPGGEST MA + E H +FP L+ FV+ GKPVWGTCAG+I L+NKA  QK+GGQ L GGLD  V RN+FGSQI SFE  L + E AA EG     GP S  AVFIRAPAI+E GP+V VLA +  +    A +                                + +V+VAV+QG LLATAFHPELT +  WH YFL +
Sbjct:    3 VGVLALQGSFNEHIAVLKRLGVKNVQIRKPEQLQ-NVTSLIIPGGESTTMAKLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKATGQKNGGQELTGGLDCTVHRNFFGSQIQSFETELPIPEIAAKEG-----GPPSCRAVFIRAPAIIEVGPDVKVLADIPVSSAVTANS-------------------SPAIQSEEELTKSEKKVIVAVKQGNLLATAFHPELTADTRWHSYFLKM 218          
The following BLAST results are available for this feature:
BLAST of NO04G01890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854524.11.500e-10070.90glutamine amidotransferase [Nannochloropsis gadita... [more]
EWM28536.12.000e-10070.90pyridoxal biosynthesis protein pdx2 [Nannochlorops... [more]
EWM28611.11.200e-7852.88ww domain binding protein 4 (formin binding protei... [more]
CBJ32119.11.300e-5655.19conserved unknown protein [Ectocarpus siliculosus][more]
XP_010253632.11.300e-5151.43PREDICTED: probable pyridoxal 5'-phosphate synthas... [more]
XP_010264707.11.400e-5050.42PREDICTED: probable pyridoxal 5'-phosphate synthas... [more]
XP_004251122.12.500e-5050.00PREDICTED: probable pyridoxal 5'-phosphate synthas... [more]
XP_006340154.12.500e-5050.83PREDICTED: probable pyridoxal 5'-phosphate synthas... [more]
XP_015058190.13.200e-5050.00PREDICTED: probable pyridoxal 5'-phosphate synthas... [more]
PHT26825.14.200e-5048.96putative pyridoxal 5'-phosphate synthase subunit P... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009618NSK009618Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01890.1NO04G01890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628147gene_1976Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100009g76gene1994Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01890.1NO04G01890.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01890 ID=NO04G01890|Name=NO04G01890|organism=Nannochloropsis oceanica|type=gene|length=3444bp
ATGGAGAGAGTACACCCGACAGCGCCGTGCATCGGTATTCTGGCCTTGCA
AGGCGCATTCGAGGAGCATGGGAAAATCATTAGGGAGCTTGGTGCGAGGA
CAGTTGAGgtgagtggtgacgcaggaaaggcaggcacaaggcccacattg
ctctagctggaggtcgtaaggtatcgcacggactgaagaggctggcggag
agttgtgccatagtgctgtctagaggcggacgggggagatgggcagaacg
atgggcagctttcttatcctcccccgccataaaaccgccatggaacaaac
ccatctcggcccactcacgcctaccccacctatccaattcaaaattacgc
agGTGCGGCTACCCGAGGACCTGGAAAAGGATTTGGATGGGCTCATCATT
CCTGGCGGCGAAAGTACCGCCATGGCTATCGTGGGAGAGCGTCATGGTAT
CTTTCCCAAGCTTAAGGCCTTCGTGCAAGGAGGCAAGCCAGTGTGGGGGA
CATGTGCAGGCATGATCCTGTTATCGAACAAGGCGGTGATGCAAAAAGAT
GGTGGACAACCTTTGATCGGTGGGTTGGACGTGGAAGTGTGCCGAAATTA
TTTTGGGAGCCAGgtaataaatgagagagaaggaggagatggaggagagt
gagaaccttgcagggtgacctctcgttggccacatgaagaaacagaagtg
aaaagcgctgcgtctctgattcttacgcgtacatatatacacatacacgt
gcaaatgtatatacatgaatattatatacaaatatatgcgtccacagATC
TCGAGCTTTGAAGTCGTATTAGATTTGGAAGGGGCCGCGGCCGAGGGCAG
TCTGGGCGCGGCCGGTCCGGTTTCAGCAGTCTTCATTCGCGCGCCTGCCA
TTCTCGAGgtatgctcaacgtccatagagaggagttaaaaaataaactga
agggattattgaaaatgctggccgcattctacatcacttcattctcttcc
ctccctctctccctccctccctccctccctccctcagGCTGGTCCCAATG
TCCACGTCCTCGCGAGGGTCAAGGCCACCCCCTGTGCCAAGGCCAGGACC
TGTATCGAAGAGGTCTACCAGCAGCAGCAGCAGCAGCAGCAGCAAGAACA
ATCGCAAAAGCAAAGAACGACGAGGATGACGAGGCAGGAGGATGGGAAGA
TGGAAGTGATGGTGGCCGTGCAGCAAGGCCAGCTACTCGCCACTGCCTTC
CATCCAGAGCTCACACCCGAGCGGTGGTGGCACCAATACTTTTTGTCCTT
ATgtcagtagcagctgcagcagtagcagcagatgcagacctagaaggagg
agaaagaggaagagggtgatgaggaggacggatgaggaagtgggggaaga
ggtcgtcagcagcagctgcagcagtagcagcaagagaaggtggaaaaacg
tggaaaggatcaatatggacagtagggatgactgtgaaagccataagata
ttttgacagtcaaaaaggcacaatgagactgcccaaaagattgaagtgag
aggcgtgcatgtattgtgtgttgctttacacaggatgtacgattttgatg
agaacgagagcagagtaaagaagataacaaagaggtcataccctagacta
caccacatgtgcatgggaccttgaaatgacggatagaaagaagaaaagaa
caatctggttattgtgaggaatcgaatcaaaatgtcatcaccgaccgccc
tctctccaccctccccatccatcctcccccgcacaggggacataaatcca
tcgatctctcctcctctcaacaagagagcgtcagcagccagtggctaatt
tccatcacaaaggggaaaccgcggaggtgagcggccacgcacaacgctac
ctacttgcttcgataagACTTTGCGGCACCACACCAAAGAGAAGCAGGAG
ACTACCCCGCCTTCGGCATCATGAGCGAATACTGGAGATCAACGgtacgt
ccaagggagtcttgggtgtggacaagcaagccgtcagcccctttcgcctt
acttcccaccgcccctcttgaatttctctgcaagcataaaagtggataaa
cccacacctcacacctctccatcccctccctccatccctgccagCCGAAA
TACTGCTGCAAATTTTGCAATGTCTGGATGGACGACAATACGACCTCCCG
TCGTCTGCACGATGGTGGAGCCAGGCATAAACAGGCAGTGGAGGATTTCT
TTAAGGCGAAGCGTGAGGCAAAACGGCAAGGCTCTCTCGATGACGGGGAG
GTAAGCAAAGAGCTGCGAGCCATCGAGAAGGCGGCCCAAGCACAAGCTGA
CCTGGATGCTGCCATGTTTGGCATTGGGGGAGGCATGCCTCCTCCTCCTC
CTCCTCCTGCTTCTCGCATTCCTCCTCCACCCCCACCACGTGAGAATCTG
TTGCGACCGCCACCGCCGCCACCCCCTCAACGAAGGGAAGGGGAAGGGGG
ATATCGCAAGGACGAGGAAAGGGAGGAGGAAGGGAAGGAGGGCGAGGAGG
AGGCTGTGGAGCCAGAAGGGAGATATAGTGTAGATGGGGTGTTCTACTTG
GAAGGAAAACACTTTCCGGAGAAGCTGGTGACGGGGACGAGGTGCGAGGT
CTGGGCGGAGGGGGAGGATGAATGGAGGGAGGGGAGGGTGGCGCGGGTAC
ACGTGACGGCAGTCCCCAACACCACGCTAGTCTTGCGAAAATTCGCAGTA
GCCTTTGTGAAGAGGAAAATGGCTGAGGAGGAGGAGGCAGCGGAGGAGAG
AGGGAAGGAGAAAGAGGGGGCGGGGGGGAAGGAGGGGGAGGAGGAAGAGA
TAGAAGAAGACATCACTCCTGATCGAATTCGCATGGTGGAGGCCCACCTC
CTCGGCACCGTTCAACGTCCCCTTCCTTCTCCTCCCCCTCCTCCTCCTAT
CAACATGGATACCGGGCTGGGGGGCTGGCAGACTGTGTCAGTTCGTACGT
TTGATGAGGAGGCAGAGAAAAAAGCGAGCTTGAAGGCGATCAAAGCCGAG
ACAAAAAAGAGGAAGAAGGAAGATGCGGAAAAACGTTCTAAAATGATCGA
GGAAGCAATGGAAGGCGAGGATGCCCTCTCTTCCTACGATCCTCACAACC
GAGGGATGTACAAGGGAATTGACTTAAACGCGGCGGCAAGGGGGGAGGGA
GGGAGAGAGGGAGAAGTGCTGCTTGGGGAGGTGGGGGGAGCGACGGTGGA
CATCGATCTGGGGGGGGATAAAGACGGGCCGGTGGCGTTCAAGAAGAAGA
AAAAGGCGGGCGGGGAAGGAGCAGGTACAAAGTTTAGGAGGAGGAGGACG
AGTGGTGATGACGATGACTAACGAAGAGGAGAGAGTGACAATGAAGAGGC
GTGGACCGGGGAAGGAAACAAAACAGAGCTCATGCATAAGACAC
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protein sequence of NO04G01890.1

>NO04G01890.1-protein ID=NO04G01890.1-protein|Name=NO04G01890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=683bp
MERVHPTAPCIGILALQGAFEEHGKIIRELGARTVEVRLPEDLEKDLDGL
IIPGGESTAMAIVGERHGIFPKLKAFVQGGKPVWGTCAGMILLSNKAVMQ
KDGGQPLIGGLDVEVCRNYFGSQISSFEVVLDLEGAAAEGSLGAAGPVSA
VFIRAPAILEAGPNVHVLARVKATPCAKARTCIEEVYQQQQQQQQQEQSQ
KQRTTRMTRQEDGKMEVMVAVQQGQLLATAFHPELTPERWWHQYFLSLYF
AAPHQREAGDYPAFGIMSEYWRSTPKYCCKFCNVWMDDNTTSRRLHDGGA
RHKQAVEDFFKAKREAKRQGSLDDGEVSKELRAIEKAAQAQADLDAAMFG
IGGGMPPPPPPPASRIPPPPPPRENLLRPPPPPPPQRREGEGGYRKDEER
EEEGKEGEEEAVEPEGRYSVDGVFYLEGKHFPEKLVTGTRCEVWAEGEDE
WREGRVARVHVTAVPNTTLVLRKFAVAFVKRKMAEEEEAAEERGKEKEGA
GGKEGEEEEIEEDITPDRIRMVEAHLLGTVQRPLPSPPPPPPINMDTGLG
GWQTVSVRTFDEEAEKKASLKAIKAETKKRKKEDAEKRSKMIEEAMEGED
ALSSYDPHNRGMYKGIDLNAAARGEGGREGEVLLGEVGGATVDIDLGGDK
DGPVAFKKKKKAGGEGAGTKFRRRRTSGDDDD*
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Synonyms
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