NO04G01680, NO04G01680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01680 vs. NCBI_GenBank
Match: EWM28563.1 (phox domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 183.0 bits (463), Expect = 2.200e-42 Identity = 157/483 (32.51%), Postives = 213/483 (44.10%), Query Frame = 0 Query: 3 SNASTLHLPQPQHHPHDDGRHKDLPPLQNTPSTADISAGSGLLLDEGDIKHHMFSLDVTSSSPS-------GAGEHQGRSQQDL--SAGGYGWYDNEESMGSMSPYGGGEDDNDSRGSGWGA--VRVLSRMETFREDMMERTAAVG---------EEDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADESNKNSSNGIRNMGINGRHRDHRPADKEILFHLLKTDFSVMTRQFLDANDVDEFLRRSRSNRERMHRYQCQXXXXXXXXXXXXXXXXXNQPVYAALGVGGLRICQTACGGQHAEFLVCLCLNQRTFVAWKRFSAFVQLYHDGHVAH--GAGRLPATRRAWDTMESRRKWWRCLEIRYLAQKLKFLESFLGAFLTEVSSPILLMKFASSDVTPEEFGNGHKFSCFSGMAPGTHGTGGDCGWRNVVVCNIRSQEEVLR-EKVLQGGAVSGSDSEGEDDEEGAREER 463 S + H P + H++ + K L + TA D K H+ SL S++PS G G + + S GGYGWY+ + ++SP G++ + G G VRVLSRMET R D+++ + G E G S ++++G R R HR + EILFHL +++FSVMTRQFL+ H + + + VYAALG+GG RICQT G QHAE+LVCLC+NQ+TF+AW+R+SAF + + D + A P TR AW +E RRKWWRCL + YLA KL LESFL A L EV P LLM FAS +P +SC GT G G + +I S EE+L +KV + G G +S + AREE+ Sbjct: 5 SRTPSPHPPLGEPRQHNESKEKVKSTLSHVRLTA-------------DAKSHVLSLPALSTAPSPVGGKDIEGGPMHGTTPDGMLHSVGGYGWYEED----NVSPANSGDEHGEEDGGGGDIKHVRVLSRMETLRVDVLDASMPGGTGHGGLQIDEAGGVTDECERLLPRVPICRHDSVNEEGSLGRSKSTRMDADTTTMSYSHAADGTR------RQHWHRQREGEILFHLPQSNFSVMTRQFLEEAAALSGTVGGGPPGRATHCFHHRHPRVLQLHSHRSHSKRQPEVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRLYRDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFASP--SPSTTICDGLWSCPCVREMDDQGTWGANG-----ITHISSNEEMLLCQKVQEAGQFRGIES---GCDTVAREEK 454
BLAST of NO04G01680 vs. NCBI_GenBank
Match: XP_005854074.1 (hypothetical protein NGA_2005800, partial [Nannochloropsis gaditana CCMP526] >EKU22285.1 hypothetical protein NGA_2005800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 181.4 bits (459), Expect = 6.400e-42 Identity = 157/483 (32.51%), Postives = 213/483 (44.10%), Query Frame = 0 Query: 3 SNASTLHLPQPQHHPHDDGRHKDLPPLQNTPSTADISAGSGLLLDEGDIKHHMFSLDVTSSSPS-------GAGEHQGRSQQDL--SAGGYGWYDNEESMGSMSPYGGGEDDNDSRGSGWGA--VRVLSRMETFREDMMERTAAVG---------EEDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIADESNKNSSNGIRNMGINGRHRDHRPADKEILFHLLKTDFSVMTRQFLDANDVDEFLRRSRSNRERMHRYQCQXXXXXXXXXXXXXXXXXNQPVYAALGVGGLRICQTACGGQHAEFLVCLCLNQRTFVAWKRFSAFVQLYHDGH--VAHGAGRLPATRRAWDTMESRRKWWRCLEIRYLAQKLKFLESFLGAFLTEVSSPILLMKFASSDVTPEEFGNGHKFSCFSGMAPGTHGTGGDCGWRNVVVCNIRSQEEVLR-EKVLQGGAVSGSDSEGEDDEEGAREER 463 S + H P + H++ + K L + TA D K H+ SL S++PS G G + + S GGYGWY+ + ++SP G++ + G G VRVLSRMET R D+++ + G E G S ++++G R R HR + EILFHL +++FSVMTRQFL+ H + + + VYAALG+GG RICQT G QHAE+LVCLC+NQ+TF+AW+R+SAF + + D + A PATR AW +E RKWWRCL + YLA KL LESFL A L EV P LLM FAS +P +SC GT G G + +I S EE+L +KV + G G +S + AREE+ Sbjct: 34 SRTPSPHPPLGEPRQHNEPKEKVKSTLSHVRLTA-------------DAKSHVLSLPALSTAPSPVGGKDIEGGPMHGTTPDGMFHSVGGYGWYEED----NVSPANSGDEHGEEDGGGGDIKHVRVLSRMETLRVDVLDASMPGGTGHGGLQIDEAGGVTDECERLLPRVPICRHDSVNEEGSLGRSKSTRMDADTTTMSYSHAADGTR------RQHWHRQREGEILFHLPQSNFSVMTRQFLEEAAALSGTVGGGPPGRATHCFHHRHPRVLQLHSHRSHSKRQPEVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRVYRNAADMFPATRGAWKALERGRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFASP--SPSTTICDGLWSCPCVREMDDQGTWGANG-----ITHISSNEEMLLCQKVQEAGQFRGIES---GCDTVAREEK 483
BLAST of NO04G01680 vs. NCBI_GenBank
Match: CBJ28523.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 71.2 bits (173), Expect = 9.300e-9 Identity = 40/117 (34.19%), Postives = 60/117 (51.28%), Query Frame = 0 Query: 271 QPVYAALGVGGLRICQTACGGQHAEFLVCLCLNQRTFVAWKRFSAFVQLYHDGHVAHGAGRLPATRRAWDTMESRRKWWRCLEIRYLAQKLKFLESFLGAFLTEVSSPILLMKFASS 388 QP A+ +G R+ + + HAE+ V + + +WKR+S F L ++ L T +AW ++ ++W+RCLE YL K LE FL FL EV +P LLM F + Sbjct: 193 QPEPYAVSIGSTRVRRLSPFAVHAEYQVLVSTKDQVHKSWKRYSDFKLLAEYAKISD----LRDTVKAWAHIQQTQRWFRCLEANYLKTKCSLLERFLAQFLFEVPTPSLLMNFVGA 305 The following BLAST results are available for this feature:
BLAST of NO04G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3 Position : 0 Zoom : x 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01680 ID=NO04G01680|Name=NO04G01680|organism=Nannochloropsis oceanica|type=gene|length=1729bpback to top protein sequence of NO04G01680.1 >NO04G01680.1-protein ID=NO04G01680.1-protein|Name=NO04G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bpback to top Synonyms
Publications
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