NO04G01640, NO04G01640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01640 vs. NCBI_GenBank
Match: EWM28598.1 (tpr domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 447.6 bits (1150), Expect = 9.300e-122 Identity = 235/314 (74.84%), Postives = 272/314 (86.62%), Query Frame = 0 Query: 577 MRQRLRLLHTMSSVSSLDEAATLLNKAMLSTASGKYEEALRLLDDVLGVAGAEYATMVEADMQARAAKVKGTILQEMGLMKEASVWYELSVRAGHLLLRQVPISEDIGEYFAPLRYVHNQLTQFYLSVHAYNLVLEHFEQLLALTDNAAERRLILREFERLSLEHDFWQDVTPGMLDQELEQGKGWYREGKLEEATLQFRRVVQLARLASFSSASGGRRLMEARALGNYATVLKDLHKCDDAILSYRLCCRILQELDEGQMERRMLNGLSLCLMERERWMDAKEVCGKLLGVTEREDNMTLVRARMEEIEEQLR 891 MRQRLRLLHTMSSVSS+ EAATLLN+AML+TA G++E+AL LLDDVLG+A AE ++ EA MQARAAKVKGT+LQEMGLMKEASVWYELSVRAG LL+Q P+SED+ +YF LRYVHNQL QFYLSV A+ LVLEHFEQL+ALTD+A RRL+LREFERLSLEHDFWQDVTPGMLDQELEQG+ WYRE EEA LQFRRVVQLARLASFSS G R++EARALGNYATVLKDL +CD++IL+YRLCCR+L+EL+E QMERRMLNGLSL L+E R+ DA VC +LL +TER+DN+ LV+ R+EEI+ LR Sbjct: 1 MRQRLRLLHTMSSVSSMGEAATLLNRAMLNTACGRFEDALCLLDDVLGMASAETTSVEEARMQARAAKVKGTVLQEMGLMKEASVWYELSVRAGRRLLQQAPLSEDLRKYFPSLRYVHNQLAQFYLSVRAFALVLEHFEQLVALTDDAGHRRLLLREFERLSLEHDFWQDVTPGMLDQELEQGRRWYREKCWEEAALQFRRVVQLARLASFSSGD-GTRMVEARALGNYATVLKDLRRCDESILAYRLCCRLLEELEEEQMERRMLNGLSLSLIEAHRYEDAAVVCERLLVLTERDDNVELVKTRLEEIQACLR 313
BLAST of NO04G01640 vs. NCBI_GenBank
Match: XP_005854881.1 (tpr domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU21489.1 tpr domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 417.9 bits (1073), Expect = 7.900e-113 Identity = 218/299 (72.91%), Postives = 256/299 (85.62%), Query Frame = 0 Query: 592 SLDEAATLLNKAMLSTASGKYEEALRLLDDVLGVAGAEYATMVEADMQARAAKVKGTILQEMGLMKEASVWYELSVRAGHLLLRQVPISEDIGEYFAPLRYVHNQLTQFYLSVHAYNLVLEHFEQLLALTDNAAERRLILREFERLSLEHDFWQDVTPGMLDQELEQGKGWYREGKLEEATLQFRRVVQLARLASFSSASGGRRLMEARALGNYATVLKDLHKCDDAILSYRLCCRILQELDEGQMERRMLNGLSLCLMERERWMDAKEVCGKLLGVTEREDNMTLVRARMEEIEEQLR 891 S+ EAATLLN+AML+TA G++E+AL LLDDVLG+A E ++ EA MQARAAKVKGT+LQEMGLMKEASVWYELSVRAG LL+Q P+SED+ +YF LRYVHNQL QFYLSV A+ LVLEHFEQL+ALTD+A +RR +LREFERLSLEHDFWQDVTPGMLDQELEQG+ WYRE EEA LQFRRVVQLARLASFSS G R++EARALGNYATVLKDL +CD++IL+YRLCCR+L+EL+E QMERRMLNGLSL L+E R+ DA VC +LL +TER+DN+ LV+ R+EEI+ LR Sbjct: 48 SMGEAATLLNRAMLNTACGRFEDALCLLDDVLGMASTETTSVEEARMQARAAKVKGTVLQEMGLMKEASVWYELSVRAGRRLLQQAPLSEDLRKYFPSLRYVHNQLAQFYLSVRAFALVLEHFEQLVALTDDAGDRRRLLREFERLSLEHDFWQDVTPGMLDQELEQGRRWYREKCWEEAALQFRRVVQLARLASFSSGD-GTRMVEARALGNYATVLKDLRRCDESILAYRLCCRLLEELEEEQMERRMLNGLSLSLIEAHRYEDAAVVCERLLVLTERDDNVELVKTRLEEIQACLR 345
BLAST of NO04G01640 vs. NCBI_GenBank
Match: XP_005852594.1 (tpr domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU23239.1 tpr domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 417.9 bits (1073), Expect = 7.900e-113 Identity = 218/299 (72.91%), Postives = 256/299 (85.62%), Query Frame = 0 Query: 592 SLDEAATLLNKAMLSTASGKYEEALRLLDDVLGVAGAEYATMVEADMQARAAKVKGTILQEMGLMKEASVWYELSVRAGHLLLRQVPISEDIGEYFAPLRYVHNQLTQFYLSVHAYNLVLEHFEQLLALTDNAAERRLILREFERLSLEHDFWQDVTPGMLDQELEQGKGWYREGKLEEATLQFRRVVQLARLASFSSASGGRRLMEARALGNYATVLKDLHKCDDAILSYRLCCRILQELDEGQMERRMLNGLSLCLMERERWMDAKEVCGKLLGVTEREDNMTLVRARMEEIEEQLR 891 S+ EAATLLN+AML+TA G++E+AL LLDDVLG+A E ++ EA MQARAAKVKGT+LQEMGLMKEASVWYELSVRAG LL+Q P+SED+ +YF LRYVHNQL QFYLSV A+ LVLEHFEQL+ALTD+A +RR +LREFERLSLEHDFWQDVTPGMLDQELEQG+ WYRE EEA LQFRRVVQLARLASFSS G R++EARALGNYATVLKDL +CD++IL+YRLCCR+L+EL+E QMERRMLNGLSL L+E R+ DA VC +LL +TER+DN+ LV+ R+EEI+ LR Sbjct: 60 SMGEAATLLNRAMLNTACGRFEDALCLLDDVLGMASTETTSVEEARMQARAAKVKGTVLQEMGLMKEASVWYELSVRAGRRLLQQAPLSEDLRKYFPSLRYVHNQLAQFYLSVRAFALVLEHFEQLVALTDDAGDRRRLLREFERLSLEHDFWQDVTPGMLDQELEQGRRWYREKCWEEAALQFRRVVQLARLASFSSGD-GTRMVEARALGNYATVLKDLRRCDESILAYRLCCRLLEELEEEQMERRMLNGLSLSLIEAHRYEDAAVVCERLLVLTERDDNVELVKTRLEEIQACLR 357
BLAST of NO04G01640 vs. NCBI_GenBank
Match: CBN76733.1 (TPR domain-containing protein [Ectocarpus siliculosus]) HSP 1 Score: 96.7 bits (239), Expect = 4.000e-16 Identity = 85/290 (29.31%), Postives = 146/290 (50.34%), Query Frame = 0 Query: 614 EALRLLDDVLGVAGAEYATMVEAD-------MQARAAKVKGTILQEMGLMKEASVWYELSVRAGHLL--LRQVPISEDIGE---YFAPLRYVHNQLTQFYLSVHAYNLVLEHFEQLLALTDNAAERRLILREFERLSLEHDFWQDVTPGM----LDQELEQGKGWYREGKLEEATLQFRRVVQLARLASFSSASGGRRLMEARALGNYATVLKDLHKCDDAILSYRLCCRILQELDEGQMERRMLNGLSLCLMERERWMDAKEVCGKLLGVTEREDNMTLVRARMEEIEE 888 EA R+L + LG+ ++E + +QA+A ++ G IL ++ ++ Y +R +++ +V + D G + L +VH L +++LS + L+HF +L+A T + RR ++ +F R +D +Q T G+ + + L++G ++R A ++F +V++ AR G MEARALGN ATV H+ AI YR C ++L++ ER++LN L +C +E +RW AK +L + E E N+ L+ E IEE Sbjct: 265 EATRILQEALGLVEKVEHILLELEQGQGDPQLQAKALRLGGDILWKLHREEKGVASY---LRCLNVVSEAEKVQGASDHGSPVVTISVLSHVHQLLAEYFLSRGSPGRGLDHFSELVACTTDEDARRQLVDDFRR----NDGFQRATAGLTQSSVQEILDEGISYFRCQDYGPAGVRFEKVLRDARCI-------GEGRMEARALGNLATVDYKTHRIPAAIRRYRTCVQLLRQQGNQATERKILNYLVMCCIEAQRWAPAKLFHEQLSKLAESEQNVQLLGRLQERIEE 540
BLAST of NO04G01640 vs. NCBI_GenBank
Match: XP_012194618.1 (hypothetical protein SPRG_01026 [Saprolegnia parasitica CBS 223.65] >KDO34964.1 hypothetical protein SPRG_01026 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 82.4 bits (202), Expect = 7.900e-12 Identity = 50/150 (33.33%), Postives = 71/150 (47.33%), Query Frame = 0 Query: 50 QDGLAFWKEAFGRGRLVAWPRFVEAVGEMMRTTYPGELQGFVELEDVLRYLIDRSEGNRARNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYL 200 QDG+A+W+ G V ++ + E + + P + E+ LR ++ R + L +W FL RFGP CI K+ F G + PWFHG ++R A+ I+ GG GSFLVRFS T P FTL Y+ Sbjct: 6 QDGVAWWRATIGDAPKVPTDHVLDHLLECIDVSLPSAMSP-QEMRIYLRVCLE------MRPTLTLRDWEHFLVRFGPFRSCITKSVTCFQSRYHDG------IAPWFHGVLSRADAEAILRGGD----DGSFLVRFSETQPEKFTLAYV 138
BLAST of NO04G01640 vs. NCBI_GenBank
Match: XP_008605015.1 (hypothetical protein SDRG_01276 [Saprolegnia diclina VS20] >EQC41301.1 hypothetical protein SDRG_01276 [Saprolegnia diclina VS20]) HSP 1 Score: 81.6 bits (200), Expect = 1.300e-11 Identity = 49/150 (32.67%), Postives = 70/150 (46.67%), Query Frame = 0 Query: 50 QDGLAFWKEAFGRGRLVAWPRFVEAVGEMMRTTYPGELQGFVELEDVLRYLIDRSEGNRARNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYL 200 QDG+A+W+ G R ++ + E + + P + E+ LR ++ R + +W FL RFGP CI K+ F G + PWFHG ++R A+ I+ GG GSFLVRFS T P FTL Y+ Sbjct: 6 QDGVAWWRATVGAAPTAPTDRVLDRLLECIDVSLPSAMSP-QEMRIYLRVCLE------MRPTLTARDWEHFLVRFGPFRSCITKSVTCFQSRYHDG------IAPWFHGVLSRADAEAILRGGD----DGSFLVRFSETQPEKFTLAYV 138
BLAST of NO04G01640 vs. NCBI_GenBank
Match: XP_009517788.1 (hypothetical protein PHYSODRAFT_310398 [Phytophthora sojae] >EGZ30513.1 hypothetical protein PHYSODRAFT_310398 [Phytophthora sojae]) HSP 1 Score: 79.7 bits (195), Expect = 5.100e-11 Identity = 54/180 (30.00%), Postives = 78/180 (43.33%), Query Frame = 0 Query: 112 LIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFAL-------DASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 ++ L ++ FL RFGPLE + K F V G M PWFHG I RQ+A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL A + +P++ + G +S+ C+ EL A Sbjct: 616 MLQLPQFRRFLARFGPLELSLSKLVACFCVN--------GGMAPWFHGEIRRQEAEAVL--STRERSDGAFLVRFSESHPTKFTLTYLKVHSTSSS-------------TPGRRELKNCLVRNLGGSGYALMEARRGGSAGNVRQRTYPSIGAFIQSSSGRLKYGVASEFSVKCNQELTA 772
BLAST of NO04G01640 vs. NCBI_GenBank
Match: ETO63213.1 (hypothetical protein F444_19030 [Phytophthora parasitica P1976]) HSP 1 Score: 79.7 bits (195), Expect = 5.100e-11 Identity = 70/252 (27.78%), Postives = 104/252 (41.27%), Query Frame = 0 Query: 45 GEDYTQDGLAFWKEAFGRG----RLVAWPRFVEAVGEMMRTTYPGELQGFVELEDVLRYLIDRSEGNRARNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 G D GL +W E + R V +P + A P EL EL V ++ S R + + E++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 2 GSDIEALGLLWWDEQLTQSTVPFRDVFFPALLCACDPQ---PLPSELSR-DELRVVTQFCF--SPNARQSDQVTREDFRRFIARFGPLELSLSKLVACF-------SEN-HELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSSTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 224
BLAST of NO04G01640 vs. NCBI_GenBank
Match: ETI34422.1 (hypothetical protein F443_19078 [Phytophthora parasitica P1569] >ETK74771.1 hypothetical protein L915_18502 [Phytophthora parasitica] >ETL81456.1 hypothetical protein L917_18231 [Phytophthora parasitica] >ETM34651.1 hypothetical protein L914_18315 [Phytophthora parasitica]) HSP 1 Score: 79.3 bits (194), Expect = 6.700e-11 Identity = 70/252 (27.78%), Postives = 104/252 (41.27%), Query Frame = 0 Query: 45 GEDYTQDGLAFWKEAFGRG----RLVAWPRFVEAVGEMMRTTYPGELQGFVELEDVLRYLIDRSEGNRARNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 G D GL +W E + R V +P + A P EL EL V ++ S R + + E++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 2 GSDIEALGLLWWDEQLTQSTVPFRDVFFPALLCACDPQ---PLPSELSR-DELRVVTQFCF--SPNARQSDQVTREDFRRFIARFGPLELSLSKLVACF-------SEN-RELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSNTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 224
BLAST of NO04G01640 vs. NCBI_GenBank
Match: ETL28198.1 (hypothetical protein L916_18402 [Phytophthora parasitica]) HSP 1 Score: 79.3 bits (194), Expect = 6.700e-11 Identity = 70/252 (27.78%), Postives = 104/252 (41.27%), Query Frame = 0 Query: 45 GEDYTQDGLAFWKEAFGRG----RLVAWPRFVEAVGEMMRTTYPGELQGFVELEDVLRYLIDRSEGNRARNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 G D GL +W E + R V +P + A P EL EL V ++ S R + + E++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 2 GSDIEALGLLWWDEQLTQSTVPFRDVFFPALLCACDPQ---PLPSELSR-DELRVVTQFCF--SPNARQSDQVTREDFRRFIARFGPLELSLSKLVACF-------SEN-HELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSNTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 224 The following BLAST results are available for this feature:
BLAST of NO04G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01640 ID=NO04G01640|Name=NO04G01640|organism=Nannochloropsis oceanica|type=gene|length=2730bpback to top protein sequence of NO04G01640.1 >NO04G01640.1-protein ID=NO04G01640.1-protein|Name=NO04G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=910bpback to top Synonyms
Publications
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