NO04G01550, NO04G01550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01550 vs. NCBI_GenBank
Match: XP_005854871.1 (hypothetical protein NGA_0377200 [Nannochloropsis gaditana CCMP526] >EKU21479.1 hypothetical protein NGA_0377200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 337.0 bits (863), Expect = 5.200e-89 Identity = 177/232 (76.29%), Postives = 191/232 (82.33%), Query Frame = 0 Query: 36 AMTVDSFVVLPISQRTGS--LARVCGQGRSATREGGEVDRKALLREAVKKAGLVAGGWGVAAAGLPQLVGAKKIINLEEARELGEKKMIEIEKAKGPLIKVRDNVKYREELVGKGPTFEKGDLVKIRYQVYKGNGDYMFSTGYGREFQDDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWKTSGGFPEPQTFGGKRKLLNHQNEFLQFEVEVIRSRPRKT 266 A V F V P R S + R C + + G +VDR +A+K AG+VA G+A GLP LV AKKIINLEEARELGEKKMI+IEKAKGPLIKVRDNVKYREEL+GKG F+ GDLVKIRYQVYKGNGDYMFSTGYGREFQ+DVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGW+TSGGFPEPQTFGGKRKLLNH NEFLQFEVEVIR RP+KT Sbjct: 33 ASNVLCFRVKPCIARDTSRDVRRACRRPTPSRGGGEDVDR----MDALKTAGMVATAGGLAIGGLPNLVEAKKIINLEEARELGEKKMIDIEKAKGPLIKVRDNVKYREELIGKGDIFKAGDLVKIRYQVYKGNGDYMFSTGYGREFQNDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWQTSGGFPEPQTFGGKRKLLNHMNEFLQFEVEVIRVRPKKT 260
BLAST of NO04G01550 vs. NCBI_GenBank
Match: EWM28541.1 (peptidyl-prolyl cis-trans fkbp-type [Nannochloropsis gaditana]) HSP 1 Score: 337.0 bits (863), Expect = 5.200e-89 Identity = 177/232 (76.29%), Postives = 191/232 (82.33%), Query Frame = 0 Query: 36 AMTVDSFVVLPISQRTGS--LARVCGQGRSATREGGEVDRKALLREAVKKAGLVAGGWGVAAAGLPQLVGAKKIINLEEARELGEKKMIEIEKAKGPLIKVRDNVKYREELVGKGPTFEKGDLVKIRYQVYKGNGDYMFSTGYGREFQDDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWKTSGGFPEPQTFGGKRKLLNHQNEFLQFEVEVIRSRPRKT 266 A V F V P R S + R C + + G +VDR +A+K AG+VA G+A GLP LV AKKIINLEEARELGEKKMI+IEKAKGPLIKVRDNVKYREEL+GKG F+ GDLVKIRYQVYKGNGDYMFSTGYGREFQ+DVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGW+TSGGFPEPQTFGGKRKLLNH NEFLQFEVEVIR RP+KT Sbjct: 33 ASNVLCFRVKPCIARDTSRNVRRACRRPTPSRGGGEDVDR----MDALKTAGMVATAGGLAIGGLPNLVEAKKIINLEEARELGEKKMIDIEKAKGPLIKVRDNVKYREELIGKGDIFKAGDLVKIRYQVYKGNGDYMFSTGYGREFQNDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWQTSGGFPEPQTFGGKRKLLNHMNEFLQFEVEVIRVRPKKT 260
BLAST of NO04G01550 vs. NCBI_GenBank
Match: EWM28542.1 (peptidyl-prolyl cis-trans fkbp-type [Nannochloropsis gaditana]) HSP 1 Score: 177.2 bits (448), Expect = 6.900e-41 Identity = 101/152 (66.45%), Postives = 113/152 (74.34%), Query Frame = 0 Query: 36 AMTVDSFVVLPISQRTGS--LARVCGQGRSATREGGEVDRKALLREAVKKAGLVAGGWGVAAAGLPQLVGAKKIINLEEARELGEKKMIEIEKAKGPLIKVRDNVKYREELVGKGPTFEKGDLVKIRYQVYKGNGDYMFSTGYGREFQDDVG 186 A V F V P R S + R C + + G +VDR +A+K AG+VA G+A GLP LV AKKIINLEEARELGEKKMI+IEKAKGPLIKVRDNVKYREEL+GKG F+ GDLVKIRYQVYKGNGDYMFSTGYGREFQ+DVG Sbjct: 33 ASNVLCFRVKPCIARDTSRNVRRACRRPTPSRGGGEDVDR----MDALKTAGMVATAGGLAIGGLPNLVEAKKIINLEEARELGEKKMIDIEKAKGPLIKVRDNVKYREELIGKGDIFKAGDLVKIRYQVYKGNGDYMFSTGYGREFQNDVG 180
BLAST of NO04G01550 vs. NCBI_GenBank
Match: CEL91697.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 164.9 bits (416), Expect = 3.500e-37 Identity = 93/184 (50.54%), Postives = 119/184 (64.67%), Query Frame = 0 Query: 80 AVKKAGLVAGGWGVAAAGLPQLVGAKK-IINLEEARELGEKKMIEIEKAKGPLIKVRDNVKYREELVG--KGPTFEKGDLVKIRYQVYKGNGDYMFSTGYGREFQDDVGDTYDFTFGRPN-SIPKGAEIGMEGMRVGGKRKISVPPELGWKTSGGFPEPQTFGGKRKLLNHQNEFLQFEVEVIR 260 + +++ L + + A+ LP AK +++EEARE+GE+K E AKGPL++ V+YRE + G P EKGD K++YQVYKGNGDY+FS GYGREF+ D DTY +G P+ IP E M GMRVG RKI VPPELG+ TS PEP TF GKRKL H NE L FEVE+++ Sbjct: 55 STRRSHLSSAAVALTASLLPLAAVAKSPPLSIEEAREIGERKREAEEAAKGPLLRSSKGVRYREPVKGPSDAPLCEKGDTCKVKYQVYKGNGDYVFSLGYGREFKQDRLDTYAIKYGDPDKKIPLAVEDAMSGMRVGSLRKILVPPELGFNTSNQRPEPDTFSGKRKLAVHINEPLLFEVELVK 238
BLAST of NO04G01550 vs. NCBI_GenBank
Match: GAQ82985.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Klebsormidium nitens]) HSP 1 Score: 149.1 bits (375), Expect = 2.000e-32 Identity = 77/173 (44.51%), Postives = 112/173 (64.74%), Query Frame = 0 Query: 92 GVAAAGLPQLVGAKKI-INLEEARELGEKKMIEIEKAKGPLIKVRDNVKYREELVGKGPTFEKGDLVKIRYQVYKGNGDYMFSTGYGREFQDDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWKTSGGFPEPQTFGGKRKLLNHQNEFLQFEVEVIRSRPR 264 G AA G P AK+ N+++ARE GE++ E E+A+GP++K+ VKYRE VG G GDLV + Y +Y+ +G Y+ S GYG+E +DDVGD + F G +P+G E G+ GM +GG+R+I VPP+LGW G P P + +R+LL H NE L FE+E+++++ R Sbjct: 9 GRAALGAPP---AKQFRTNIDDAREEGERRREEKERAEGPIVKLPSGVKYRELAVGTGEALRPGDLVSVYYTIYRLSGLYIDSVGYGKEGKDDVGDAFTFELG-AGQVPQGVEQGVLGMCIGGRRRILVPPKLGWINDGVLPRPTSGAAERRLLRHTNEPLLFEIEIVKTKHR 177
BLAST of NO04G01550 vs. NCBI_GenBank
Match: XP_024532488.1 (peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic-like isoform X1 [Selaginella moellendorffii]) HSP 1 Score: 142.5 bits (358), Expect = 1.900e-30 Identity = 76/174 (43.68%), Postives = 110/174 (63.22%), Query Frame = 0 Query: 90 GWGVAAA---GLPQLVGAKKI-INLEEARELGEKKMIEIEKAKGPLIKVRDNVKYREELVGKGPTFEKGDLVKIRYQVYKGNGDYMFSTGYGREFQDDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWKTSGGFPEPQTFGGKRKLLNHQNEFLQFEVEVIR 260 G G+AAA LP A+K+ NLEEARE GE + E E+A+GP+I + +++RE G G T GD+V ++Y +Y+ NG Y+ S GYG E +DDVGD F G ++P+ E+GMEGM++GGKR+I V P+LGW P+P T R+L+N + L FE+E+++ Sbjct: 33 GHGIAAASALSLPSSPSARKLYTNLEEAREAGEARREEKERAQGPIITLPSGIRFRELDAGSGRTVAPGDVVSVQYVIYRLNGMYLDSLGYGNEGKDDVGDVLTFQLG-GRTVPRAVELGMEGMKLGGKRRILVNPDLGWTQESMQPQPTTAAAGRRLMNSFQKPLLFEIELVK 205
BLAST of NO04G01550 vs. NCBI_GenBank
Match: XP_024533155.1 (peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic-like isoform X1 [Selaginella moellendorffii]) HSP 1 Score: 141.4 bits (355), Expect = 4.200e-30 Identity = 76/174 (43.68%), Postives = 110/174 (63.22%), Query Frame = 0 Query: 90 GWGVAAA---GLPQLVGAKKI-INLEEARELGEKKMIEIEKAKGPLIKVRDNVKYREELVGKGPTFEKGDLVKIRYQVYKGNGDYMFSTGYGREFQDDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWKTSGGFPEPQTFGGKRKLLNHQNEFLQFEVEVIR 260 G G+AAA LP A+K+ NLEEARE GE + E E+A+GP+I + V++RE G G T GD+V ++Y +Y+ NG Y+ S GYG E +DDVG+ F G ++P+ E+GMEGM++GGKR+I V P+LGW P+P T R+L+N + L FE+E+++ Sbjct: 40 GHGIAAASALSLPSSPSARKLYTNLEEAREAGEARREEKERAQGPIITLPSGVRFRELDAGSGRTVAPGDVVSVQYVIYRLNGMYLDSLGYGNEGKDDVGEVLTFQLG-GKTVPRAVELGMEGMKLGGKRRILVNPDLGWTQESMQPQPTTAAAGRRLMNSFQKPLLFEIELVK 212
BLAST of NO04G01550 vs. NCBI_GenBank
Match: XP_024533157.1 (peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic-like isoform X3 [Selaginella moellendorffii]) HSP 1 Score: 141.4 bits (355), Expect = 4.200e-30 Identity = 76/174 (43.68%), Postives = 110/174 (63.22%), Query Frame = 0 Query: 90 GWGVAAA---GLPQLVGAKKI-INLEEARELGEKKMIEIEKAKGPLIKVRDNVKYREELVGKGPTFEKGDLVKIRYQVYKGNGDYMFSTGYGREFQDDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWKTSGGFPEPQTFGGKRKLLNHQNEFLQFEVEVIR 260 G G+AAA LP A+K+ NLEEARE GE + E E+A+GP+I + V++RE G G T GD+V ++Y +Y+ NG Y+ S GYG E +DDVG+ F G ++P+ E+GMEGM++GGKR+I V P+LGW P+P T R+L+N + L FE+E+++ Sbjct: 33 GHGIAAASALSLPSSPSARKLYTNLEEAREAGEARREEKERAQGPIITLPSGVRFRELDAGSGRTVAPGDVVSVQYVIYRLNGMYLDSLGYGNEGKDDVGEVLTFQLG-GKTVPRAVELGMEGMKLGGKRRILVNPDLGWTQESMQPQPTTAAAGRRLMNSFQKPLLFEIELVK 205
BLAST of NO04G01550 vs. NCBI_GenBank
Match: XP_024533156.1 (peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic-like isoform X2 [Selaginella moellendorffii]) HSP 1 Score: 134.4 bits (337), Expect = 5.100e-28 Identity = 76/174 (43.68%), Postives = 108/174 (62.07%), Query Frame = 0 Query: 90 GWGVAAA---GLPQLVGAKKI-INLEEARELGEKKMIEIEKAKGPLIKVRDNVKYREELVGKGPTFEKGDLVKIRYQVYKGNGDYMFSTGYGREFQDDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWKTSGGFPEPQTFGGKRKLLNHQNEFLQFEVEVIR 260 G G+AAA LP A+K+ NLEEARE GE + E E+A+GP+I + V RE G G T GD+V ++Y +Y+ NG Y+ S GYG E +DDVG+ F G ++P+ E+GMEGM++GGKR+I V P+LGW P+P T R+L+N + L FE+E+++ Sbjct: 40 GHGIAAASALSLPSSPSARKLYTNLEEAREAGEARREEKERAQGPIITLPSGV--RELDAGSGRTVAPGDVVSVQYVIYRLNGMYLDSLGYGNEGKDDVGEVLTFQLG-GKTVPRAVELGMEGMKLGGKRRILVNPDLGWTQESMQPQPTTAAAGRRLMNSFQKPLLFEIELVK 210
BLAST of NO04G01550 vs. NCBI_GenBank
Match: XP_001700064.1 (peptidyl-prolyl cis-trans isomerase, FKBP-type [Chlamydomonas reinhardtii]) HSP 1 Score: 121.3 bits (303), Expect = 4.500e-24 Identity = 63/149 (42.28%), Postives = 85/149 (57.05%), Query Frame = 0 Query: 129 GPLIKVRDNVKYREELVGKGPTFEKGDLVKIRYQVYK------------GNGDYMFSTGYGREFQDDVGDTYDFTFGRPNSIPKGAEIGMEGMRVGGKRKISVPPELGWKTSGGFPEPQTFGGKRKLLNHQNEFLQFEVEVIRSRPRKT 266 G L+ + ++YRE L G GP G + ++ Y VY+ G ++FS GYG+E +DDVG TY F G PNS+P + GMR GGKR+I VPP LGW + P P TFGG R+L H++E L FE E++R R + T Sbjct: 164 GTLVTLPSGLQYRELLEGSGPEAALGSVCEVSYVVYRLASGAYYKYSSGGTPVFLFSLGYGKEGKDDVGQTYRFRLGDPNSLPAAVTPALVGMRQGGKRRILVPPRLGWVSDKVGPRPDTFGGGRRLEGHKDEPLLFEAELVRVRTQGT 312 The following BLAST results are available for this feature:
BLAST of NO04G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01550 ID=NO04G01550|Name=NO04G01550|organism=Nannochloropsis oceanica|type=gene|length=1140bpback to top protein sequence of NO04G01550.1 >NO04G01550.1-protein ID=NO04G01550.1-protein|Name=NO04G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=266bpback to top Synonyms
Publications
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