NO04G01520, NO04G01520 (gene) Nannochloropsis oceanica

Overview
NameNO04G01520
Unique NameNO04G01520
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1202
Alignment locationchr4:469889..471090 -

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Properties
Property NameValue
DescriptionGcn5-related n-acetyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:469889..471090 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
IPR000182GNAT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO04G01520 vs. NCBI_GenBank
Match: EWM28531.1 (gcn5-related n-acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 344.0 bits (881), Expect = 4.900e-91
Identity = 197/304 (64.80%), Postives = 225/304 (74.01%), Query Frame = 0
Query:    6 TIALLLVVATTL--LAVSAFVP----ALSKSTTTTRLSSCSRPLSXXXXXXXXXXXXXXXLQSISLDSFFGRRTQNSAGSSGDMTSATAPITIMEVQRQDLRIIASVCIESFFGTADRLNPIRSMQLATLLDEQLTDLRSRFGGRAVGGSVFLQAVDADGQIQGVVEIGVTQSMKWGFEQYGVPVRDERPYLANLSVRPGARRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGYVDLYTDATGRKYELSGMSIKNVRINKVTLRKPLTPSTSAVKNPLNSLAAMWAQLSLS 304
            +I L +++AT +   A+SAF+P    ++S   TTT L S S                     SISLDSFFGRR               + I I EV RQDLR+ ASVCIESFFGTADRLNP+RSMQLATLLDEQ  DLRSRFGGRAVGGS++LQAVDADG + G VE+G+TQS+K+G EQYGVPVRDERPYLANLSVRP  RRQG+GR LV ACEE+V+ SWG+DELILQVED+NQQAR LYRD+GY+DLYTDATGRKYELSGMSIKNVRINKVTLRK L P  SA KNP    AA+W QLS+S
Sbjct:    8 SIGLFMILATFMPTAALSAFIPSSPTSISSIATTTTLRSRSNTAR----------------PSISLDSFFGRRXXXXXXXXXXXXXXXS-IIISEVSRQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQCADLRSRFGGRAVGGSLYLQAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVR-SWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVP--SAAKNP---FAALWGQLSIS 288          
BLAST of NO04G01520 vs. NCBI_GenBank
Match: XP_005854878.1 (gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526] >EKU21486.1 gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 343.2 bits (879), Expect = 8.300e-91
Identity = 196/304 (64.47%), Postives = 225/304 (74.01%), Query Frame = 0
Query:    6 TIALLLVVAT--TLLAVSAFVP----ALSKSTTTTRLSSCSRPLSXXXXXXXXXXXXXXXLQSISLDSFFGRRTQNSAGSSGDMTSATAPITIMEVQRQDLRIIASVCIESFFGTADRLNPIRSMQLATLLDEQLTDLRSRFGGRAVGGSVFLQAVDADGQIQGVVEIGVTQSMKWGFEQYGVPVRDERPYLANLSVRPGARRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGYVDLYTDATGRKYELSGMSIKNVRINKVTLRKPLTPSTSAVKNPLNSLAAMWAQLSLS 304
            +I L +++AT  +  A+SAF+P    ++S   TTT L S S                     SISLDSFFGRR               + I I EV RQDLR+ ASVCIESFFGTADRLNP+RSMQLATLLDEQ  DLRSRFGGRAVGGS++LQAVDADG + G VE+G+TQS+K+G EQYGVPVRDERPYLANLSVRP  RRQG+GR LV ACEE+V+ +WG+DELILQVED+NQQAR LYRD+GY+DLYTDATGRKYELSGMSIKNVRINKVTLRK L P  SA KNP    AA+W QLS+S
Sbjct:    8 SIGLFMILATFMSTAALSAFIPSSPTSISSIATTTTLRSRSNTAR----------------PSISLDSFFGRRXXXXXXXXXXXXXXXS-IIISEVSRQDLRLAASVCIESFFGTADRLNPVRSMQLATLLDEQFADLRSRFGGRAVGGSLYLQAVDADGAMVGFVEVGITQSLKYGMEQYGVPVRDERPYLANLSVRPALRRQGVGRRLVHACEEMVR-TWGYDELILQVEDSNQQARNLYRDMGYIDLYTDATGRKYELSGMSIKNVRINKVTLRKALVP--SAAKNP---FAALWGQLSIS 288          
BLAST of NO04G01520 vs. NCBI_GenBank
Match: CBJ31967.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 139.8 bits (351), Expect = 1.400e-29
Identity = 86/214 (40.19%), Postives = 128/214 (59.81%), Query Frame = 0
Query:   90 ITIMEVQRQDLRIIASVCIESFFGTADRLNPIRSMQLATLLDEQLTDLRSRFGGRAVGGSVFLQAVDA---DGQIQGVVEIGVTQSMKWGFEQYGVPVRDERPYLANLSVRPGARRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGYVDLYTDATGRKYELSGMSIKNVRINKVTLRKPLTPSTSAVKNPLNSLAAMWAQL 301
            + ++   R+DL    ++CI+ FFG  D  +P ++ QL  LL EQ  DL SR   R    SV  +A+D    DG + G VE+  T   K+G    G+ + D RP ++NL+V P  RR G+G AL++ACE++V+ +W FDE+ILQVE+ N+ A   Y   G+  L+ D   R+Y+ SG  ++NVR +K+T+RK L  ST   K+  +SLA   +QL
Sbjct:   32 LAVVLAGREDLDEAGALCIKVFFGQPD--SPWKAAQLRQLLHEQRQDLESRCSRRE---SVMFKAIDTRRKDGMV-GFVEVSETSGSKYGMGA-GITLADTRPVVSNLAVDPRVRRCGVGSALMEACEDLVK-TWSFDEIILQVEEANEAALAFYGGKGFKKLFVDKAARRYDTSGFLLQNVRTSKLTMRKALGSSTKRSKSG-DSLADHVSQL 236          
BLAST of NO04G01520 vs. NCBI_GenBank
Match: XP_002179214.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49037.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 92.0 bits (227), Expect = 3.300e-15
Identity = 58/151 (38.41%), Postives = 78/151 (51.66%), Query Frame = 0
Query:  159 GQIQGVVEIGVTQ----SMKWGFEQYG------VPVRDERPYLANLSVRPGARRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGYVDLYTDATGRKYELSGMSIKNVRINKVTLRKPL------TPSTSAVKNPLNSL 294
            G+I G VE+        S K GF+         +   + RP L NLSVR  AR+ G+G  LVQACE+ V   WG  E+IL+VED N  AR  Y   GY  L+ D   R+Y+ +G+ +K VR  +  +RK L        +   VKN +N L
Sbjct:  192 GEILGFVEVTKKPYGLGSEKVGFDDESRIKLRKMSFYESRPVLTNLSVRYEARQSGVGSKLVQACEDRVLKDWGMKEMILEVEDDNDNARNFYLKRGYKVLFEDPASRRYDTTGVWLKQVRCKRQIMRKALGAVELVALNAFEVKNSVNKL 342          
BLAST of NO04G01520 vs. NCBI_GenBank
Match: CBJ49195.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 89.4 bits (220), Expect = 2.200e-14
Identity = 62/194 (31.96%), Postives = 100/194 (51.55%), Query Frame = 0
Query:   95 VQRQDLRIIASVCIESFFGTADRLNPIRSMQLATLLDEQLTDLRSRFG---GRAVGGSVFLQAVDADGQIQG--VVEIGVTQSMKWGFEQYGVPVRDE----RPYLANLSVRPGARRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGYVDLYTDATGRKYELSGMSIKNVRINKVTLRKPL 280
            V   D+   A   +E+F+  A     +   Q  +L+ E ++D R R+G   G     S+ + A    G+I G   VE+ V    + G +  G+    E    RP LANL+V    RR+G+ + LV+ CE++ +  WG+DE++L VE+ N++AR+LY  LGY  L+ D   +K       I++V    V +R+ L
Sbjct:   96 VNDADIPETAEFFVENFWDDA-----VAPSQKRSLVRELVSDYRRRYGTLMGNRKLQSMLMVARGNGGEIIGCIAVEVSVCMGERVGVKARGISPNAEGAELRPILANLAVARSERRKGLAKRLVKHCEDVCR-GWGYDEVLLLVEENNKRARRLYSKLGYKMLFRDTKAKKILPDSYQIRDVPCVNVCMRRDL 283          
BLAST of NO04G01520 vs. NCBI_GenBank
Match: GAX27751.1 (hypothetical protein FisN_13Hu148 [Fistulifera solaris])

HSP 1 Score: 82.8 bits (203), Expect = 2.000e-12
Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 0
Query:  188 RPYLANLSVRPGARRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGYVDLYTDATGRKYELSGMSIKNVR 270
            RP+L NLSV+  ARR G+G AL Q CEE V   W  +E+ L+VED N+ A + YR  GY  L+ D TGR+Y+ +G+ ++  R
Sbjct:  253 RPFLTNLSVKYSARRSGVGSALAQRCEEEVLARWNKNEITLEVEDDNKLALEFYRKRGYEILFEDKTGRRYDTTGLWLQQKR 334          
BLAST of NO04G01520 vs. NCBI_GenBank
Match: XP_002287873.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95316.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 79.3 bits (194), Expect = 2.200e-11
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0
Query:  188 RPYLANLSVRPGARRQGIGRALVQACEEIVQNSWG--FDELILQVEDTNQQARKLYRDLGYVDLYTDATGRKYELSGMSIKNVRINKVTLRKPL 280
            RPYL+NLSV   AR+ G+G  L+ ACEE V N W   + E++LQVE+ N  A K Y+  G+  ++ D T R+Y+ SG+ +K  RI K  + K L
Sbjct:  234 RPYLSNLSVVEYARQSGVGSKLLDACEEAVLN-WNATYSEIVLQVEEDNTSAIKFYKRRGWEFVFADPTCRRYDTSGLFLKETRITKYAMLKRL 326          
BLAST of NO04G01520 vs. NCBI_GenBank
Match: OEU22143.1 (hypothetical protein FRACYDRAFT_273783 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 79.3 bits (194), Expect = 2.200e-11
Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 0
Query:  185 RDERPYLANLSVRPGARRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGYVDLYTDATGRKYEL-SGMSIKNVRINKVTLRK 278
            R  RP L NL+V   ARR GIG  LV ACE  V+  W  +E+IL+VED N +  + Y+  G+  L++D   R+Y++ SG+ +K VR  +  +RK
Sbjct:  159 RPMRPVLTNLAVIKSARRAGIGSKLVDACEMHVRKDWNMNEIILEVEDYNTKGLEFYQKAGFEVLFSDPASRRYDIDSGLWLKKVRCRREIMRK 252          
BLAST of NO04G01520 vs. NCBI_GenBank
Match: OBQ33285.1 (GCN5 family acetyltransferase [Anabaena sp. MDT14b])

HSP 1 Score: 78.2 bits (191), Expect = 5.000e-11
Identity = 64/190 (33.68%), Postives = 90/190 (47.37%), Query Frame = 0
Query:   63 ISLDSFFGRRTQNSAGSSGDMTSATAPITIMEVQ---RQDLRIIASVCIESFFGTADRLNPIRSMQLATLLDEQLTDLRSRFGGRAVGGSVFLQAVDA---DGQIQGVVEIGVTQSMKWGFEQYGVPVRDERPYLANLSVRPGARRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGY 247
            ++L S+F   TQ  A S     +AT P+  ++++     DL  IA +  ESF         +     A        DLR R         + L AVDA   D +I G +E+GV  +  W        +    PYL+NL+V P  RR G+G +L+  CE+I Q  WGF +L L V + N QAR+LY  L Y
Sbjct:   14 LALKSWFFNPTQPQARSE----TATLPVGQLQIRVATPDDLMNIAQIVAESFHSQ----QGLWGWTFALFRVGIYEDLRHRLQS-PTNHHICLVAVDAATEDQKIMGTIEMGVRITDAW------TSINPGFPYLSNLAVHPSYRRLGVGASLLIRCEQISQ-EWGFQDLYLHVLENNHQARQLYFKLAY 187          
BLAST of NO04G01520 vs. NCBI_GenBank
Match: BAI90902.1 (hypothetical protein NIES39_G01190 [Arthrospira platensis NIES-39])

HSP 1 Score: 77.4 bits (189), Expect = 8.500e-11
Identity = 61/195 (31.28%), Postives = 85/195 (43.59%), Query Frame = 0
Query:   68 FFGRRTQNSAGSSGDMTSATAPITIMEVQRQDLRIIASVCIESFF---GTADRLNPIRSMQLATLLDEQLTDLRSRFGGRAVGGSVFLQAVDADG-------------QIQGVVEIGVTQSMKWGFEQYGVPVRDERPYLANLSVRPGARRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGY 247
            F    T    GS G  TS   P+ I    R D+  +  +  ESF    G    + PI  + +         DLR+R    + G    L A  AD               + G VE+G+     W        + D  PY++NL+V P ARRQG+ R L+  CE++    WGF +L L V + N QAR+LY  +GY
Sbjct:    5 FLTSTTYKREGSGG--TSHGYPLKIRVALRADVTRLTEILAESFHTRQGLGGLMYPIFRLGI-------YEDLRNRL-ATSSGYYTCLVAAIADSPHKLGNIPLNVPEHLVGTVEMGLRSPSPWS-------IGDRYPYISNLAVHPTARRQGVARELLIGCEQVAM-KWGFSDLYLHVLENNSQARQLYHQVGY 181          
The following BLAST results are available for this feature:
BLAST of NO04G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
100200300400500600700800900100011001200Expect = 4.90e-91 / Id = 64.80Expect = 8.30e-91 / Id = 64.47Expect = 1.40e-29 / Id = 40.19Expect = 3.30e-15 / Id = 38.41Expect = 2.20e-14 / Id = 31.96Expect = 5.00e-11 / Id = 33.68Expect = 8.50e-11 / Id = 31.28SequenceEWM28531.1XP_005854878.1CBJ31967.1XP_002179214.1CBJ49195.1GAX27751.1XP_002287873.1OEU22143.1OBQ33285.1BAI90902.1
Match NameE-valueIdentityDescription
EWM28531.14.900e-9164.80gcn5-related n-acetyltransferase [Nannochloropsis ... [more]
XP_005854878.18.300e-9164.47gcn5-related n-acetyltransferase [Nannochloropsis ... [more]
CBJ31967.11.400e-2940.19conserved unknown protein [Ectocarpus siliculosus][more]
XP_002179214.13.300e-1538.41predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBJ49195.12.200e-1431.96conserved unknown protein [Ectocarpus siliculosus][more]
GAX27751.12.000e-1247.56hypothetical protein FisN_13Hu148 [Fistulifera sol... [more]
XP_002287873.12.200e-1144.68predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU22143.12.200e-1142.55hypothetical protein FRACYDRAFT_273783 [Fragilario... [more]
OBQ33285.15.000e-1133.68GCN5 family acetyltransferase [Anabaena sp. MDT14b... [more]
BAI90902.18.500e-1131.28hypothetical protein NIES39_G01190 [Arthrospira pl... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009658NSK009658Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01520.1NO04G01520.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578470gene_1939Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100009g37gene2028Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01520.1NO04G01520.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01520 ID=NO04G01520|Name=NO04G01520|organism=Nannochloropsis oceanica|type=gene|length=1202bp
ACAGCCCCATACAGCCACCATGCGTCAAACATGCACAATAGCGCTGCTCC
TGGTGGTGGCCACGACCCTGCTGGCTGTATCTGCATTCGTCCCCGCACTG
TCAAAGTCCACCACTACCACACGCCTCAGTTCCTGCAGCAGACCTCTGAG
CAGCAGACCTCTGAGCAGCAGCAGCAGATCACGCACCAACACCGCCCTGC
AAAGTATCAGCCTGGACTCGTTCTTCGGGAGGCGCACACAAAATTCCGCC
GGTAGCAGCGGCGACATGACCAGCGCGACCGCGCCCATCACCATCATGGA
AGTCCAACGGCAAGACCTGCGGATTATTGCATCTGTGTGTATTGAAAGTT
TTTTTGGGACGGCCGATAGGCTCAACCCCATCCGTTCCATGCAACTAGCC
ACGTTATTGGACGAGCAATTAACTGACTTGCGCTCCCGCTTTGGTGGGCG
TGCGGTGGGGGGCTCCGTTTTTTTGCAAGCCGTGGATGCGGACGGACAGA
TTCAAGGAGTGGTGGAAATTGGGGTGACTCAATCGATGAAGTGGGGCTTT
GAACAGTACGGGGTGCCTGTGCGTGATGAGCGACCTTATCTCGCTAATCT
ATCAGTGCGGCCTGGGGCGCGAAGGCAAGGGATAGGTCGCGCCTTGGTGC
AAGCATGTGAGGAGATTGTCCAGAATTCATGGGGCTTCGACGAGTTAATT
TTGCAAGTAGAAGACACGAACCAACAAGCCCGCAAGCTTTATCGTGATCT
TGGCTACGTTGATTTGTACACGGATGCAACTGGCCGTAAGTACGAGTTGA
GTGGAATGAGCATTAAGAATGTGCGAATCAATAAAGTCACGTTAAGAAAG
CCCCTAACGCCCTCTACGTCTGCGGTCAAGAACCCGTTGAACAGCCTAGC
AGCGATGTGGGCACAATTGTCCTTGTCGACGCAAGGGTAGGCGACGAGAC
AAGGGAAGGAAGGAGGGAAGAAATGAGGGATAGAAGGATGGATAGACGTG
TACATACAATAGAAAGAAGCGATGGCAAGTATGTGTAAGAGTAAGGTTCA
AGGCGATGGAATCAAATCGAATCGGAGAGGAGAGCTTTTCGTATGGCATG
CTCAACTCATAATTATTAGATAGAGGGAAGAGATAGGCGGCAGGCGTTTT
GTAAAAGACTTTAAAGAAGGGAAACGAAAGCAGCATGAGAAAAATAGCGA
CA
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protein sequence of NO04G01520.1

>NO04G01520.1-protein ID=NO04G01520.1-protein|Name=NO04G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=307bp
MRQTCTIALLLVVATTLLAVSAFVPALSKSTTTTRLSSCSRPLSSRPLSS
SSRSRTNTALQSISLDSFFGRRTQNSAGSSGDMTSATAPITIMEVQRQDL
RIIASVCIESFFGTADRLNPIRSMQLATLLDEQLTDLRSRFGGRAVGGSV
FLQAVDADGQIQGVVEIGVTQSMKWGFEQYGVPVRDERPYLANLSVRPGA
RRQGIGRALVQACEEIVQNSWGFDELILQVEDTNQQARKLYRDLGYVDLY
TDATGRKYELSGMSIKNVRINKVTLRKPLTPSTSAVKNPLNSLAAMWAQL
SLSTQG*
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Synonyms
Publications