NO04G01480, NO04G01480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO04G01480 vs. NCBI_GenBank
Match: EWM28525.1 (hypothetical protein Naga_100009g33 [Nannochloropsis gaditana]) HSP 1 Score: 300.1 bits (767), Expect = 2.400e-77 Identity = 189/533 (35.46%), Postives = 263/533 (49.34%), Query Frame = 0 Query: 267 DDNENSTDIIRIQASSSIASSLASIISCLPPASSTRERSVWGEEDKDMHEVGCASRCLSELSIQQRFFGLRDVA----SGEKCNDKSSFSVSKHVMVTSAWCRHLAFIALRPDVPCGDISDLVTEVLREQGLIVRKRQGSHIVGGMKVVDKEGQEKGGICGNGIQAEWSFVDIQVALDRQDRERVLLVRFIISTETEEGGYNTDCKKIMTPSMGRRSSVAGVEGGSDEQGTLLEALKAKLFGSGLNKRALLRDVDANVSSSXXXXXXKSITLDPQYLHQLEDLAREDMHRTLEATARNLEEYVCAAEEKCEQLRLLMEPMYLQYKLEKAPSIAKALPLSFYPLDLLAADGTMGGDEQISLEEKTLVD---------------DRLAYIDALKETAWRCCLMQCDAEMTARMQRKNLQVLDRMAKCTEYQRLLIANLRDNERRTSVPLFQAFKNQIGHDGGIYDDEDVETPLYYCRCIIGSRPATLFMTYEHLAFVSNVPGFGWSRQIRYDEISTCGLASLRIGITLAKAIAIR 781 ++ E+S +++ + IASSL +I L + +S W +E DMHEVGCAS LSELSI+QRF G R +A + + SS S+ V + CRHLAFI LRPD+ DI+ + ++ + ET G GG D + LD YL QLED+ARE+MH+ L+ T + LE+YV E++C QL+ + PM+ YKL + P + + LPLS+YPL+LLAA E+ S +K+ + D++ Y+DAL++ AWR +MQCDAEMTA MQRKNLQ++DRM +C EYQ L+ LRDN RT+VPLF FK QIGHDGG+++DE+VETPLYYCRCI+GSRPATLF+T+ + FVS V GF W+R++ D I++ G+ + +G+ AKAIA++ Sbjct: 2 ENYEDSPEVLH-KTPIDIASSLVEVIESLHSTPIAKAQSKWTDEASDMHEVGCASSFLSELSIEQRFSGFRALAQFKQNASQVQTTSSLPSSRDVPAVATLCRHLAFIILRPDLRSEDIASEYSSMVT--------------------------------------------------------------VTENETATG------------------------GGEDPK------------------------------------------LDRFYLRQLEDMAREEMHKALDGTIQQLEDYVLEKEKQCLQLKEFLMPMFTLYKLAEPPGLNEPLPLSYYPLNLLAACNQSARSEEESFADKSDHENVWAENQRPHRSGSLDKVTYMDALRDRAWRHNVMQCDAEMTACMQRKNLQIVDRMGRCNEYQLFLLETLRDNPFRTTVPLFHNFKYQIGHDGGVFEDEEVETPLYYCRCIVGSRPATLFITFTQITFVSKVCGFVWARRLPLDRITSHGMTYMHLGVKRAKAIALK 405
BLAST of NO04G01480 vs. NCBI_GenBank
Match: CBN75898.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.8 bits (268), Expect = 1.700e-19 Identity = 104/357 (29.13%), Postives = 159/357 (44.54%), Query Frame = 0 Query: 430 WSFVDIQVALDRQDRERVLLVRFIISTETEEGGYNTDCKKIMTPSMGRRSSVAGVEGGSDEQGTLLEALKAKLFGSGLNKRALLRDVDANVSSSXXXXXXKS-ITLDPQYLHQLEDLAREDMHRTLEATARNLEEYVCAAEEKCEQLRLLMEPMYLQYKLEKAPSIAK----------ALPLSFYPL-DLLAADGTMGGDEQISLEEKTLVDDRLAYIDALKETAWRCCLMQCDAEMTARMQRKNLQVLDRMAKCTEYQRLLIANLRDNE---RRTSVPLFQAFKNQIGHDGGIYDDEDVETPLYYCRCIIGSRPATLFMTYEHLAFVSNVPGFGWSRQI-RYDEISTCGLASLRIG 771 WS VD+Q+ + + + RVLLVRF+ S + T R + A E G L A AK F S + + LRD A + S K+ + +D Q+L Q+E + + DM +L +L+E+ E + + L+E M+ L P + LP S P+ DL D + E ++ + LA E +CD +MTARMQRKN QV+ R+++ YQR L LRD RR+ + + Q + GI D +VE P+Y+C I RP L++TY H+ V+ VPGF + + ++I + L +G Sbjct: 671 WSHVDMQLVVGQASKHRVLLVRFVTS-------------RTATSREVFRLAAAAAENGE----PLAIAPAAKGFVSSVQR--ALRDRGALLESLEELPVQKTKVEIDAQFLSQVEGMCQFDMVASLREAGVSLDEHARNEELRGVVVTRLLEEMFNLVGLPMLPPPPQLVLAMPRPNDILPSSVDPMPDLCEEDRGELSSHRFCSEASRVMANVLARCIRYTE--------KCDEQMTARMQRKNRQVMQRISRSQLYQRELFQALRDGHMAVRRSRMTAAFSRVMQSRPEAGI--DPNVEAPVYFCSIICNRRPGYLYLTYWHVCVVTKVPGFASTVTVMNLEDIDAVEIVKLFVG 998
BLAST of NO04G01480 vs. NCBI_GenBank
Match: EJK48799.1 (hypothetical protein THAOC_32373 [Thalassiosira oceanica]) HSP 1 Score: 84.3 bits (207), Expect = 2.000e-12 Identity = 77/278 (27.70%), Postives = 125/278 (44.96%), Query Frame = 0 Query: 533 TLDPQYLHQLEDLAREDMHRTLEATARNLEEYVCAAEEKCEQLRLLMEPMYLQYKLEKAPSIAKALPLSFYPLDLLAADGTMGGDEQISLE-------EKTLVDDRLAYIDALKETAWRCCL---MQCDAEMTARMQRKNLQVLDRMAKCTEYQRLLIANLRDNE-----RRTSVPLFQAFKNQIGHDGGIYD---DEDVETPLYYCRCIIGSRPATLFMTYEHLAFVSN-VPGFGWSRQIRYDEISTCGLASLRIGITLAKAIAIRAPTARVASPMP 792 TLD +++Q++ L RE M +L A +LE Y E L ++ P Y YKL P + +PL+ YPLD G + +LE E+ V +L+ + + Q D E AR+ RKNLQV+DR+AK ++R IA +RD+ ++ F + +N+ + G + D E PL C ++G+ T ++T+ HL F + VP G +R + + + + I AP+ + SP+P Sbjct: 699 TLDAHFINQIKALCRESMIVSLIKAASDLEVYAREFEVSTGNLDQILRPTYESYKL-APPRLPTPVPLTAYPLDYHETSPPWGPHVKEALESASASSNEEGGVQSQLSSFEQSAKVISSVVAGFQRQNDMEQGARLGRKNLQVMDRLAKMQSHKRDSIARIRDSYGENYLATSAADDFHSLRNKSKNIGSLTDRIHASPNEVPLLICNVLVGNAAGTCYVTHSHLLFNTQLVPILGGNR--------------VNLFSIMDVDVTIHAPSKSLLSPLP 961
BLAST of NO04G01480 vs. NCBI_GenBank
Match: XP_002185419.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43088.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 83.2 bits (204), Expect = 4.500e-12 Identity = 74/245 (30.20%), Postives = 108/245 (44.08%), Query Frame = 0 Query: 533 TLDPQYLHQLEDLAREDMHRTLEATARNLEEYVCAAEEKCEQLRLLMEPMYLQYKLEKAPSIAKALPLSFYPLD---------------LLAADGTMGGDEQISLEEKTLVDDRLAYIDALKETAW---------RCCLMQCDAEMTARMQRKNLQVLDRMAKCTEYQRLLIANLRDNERRTSVPLFQAFKNQIGHDGGIYDDEDVETPLYYCRCIIGSRPATLFMTYEHLAFVSN-VPGFGWSR 753 TLD Y Q+ +RE M L +A LEEY AE C + L++P + Y +E AP + K +PL+ YPLD + A + T +E L L IDA + A +Q D E AR+ RKNLQV+DR+AK +QR LI +L++ + A + G+ +E PL ++G T +T +HL F++ +P G SR Sbjct: 608 TLDVHYCSQIRRFSREVMIMQLLKSASELEEYAREAEYACANMISLLQPTFDAYGME-APLLPKPVPLNEYPLDFTPPQQACPPWGLRVMEALNETQALTSDAGRDEPILSPTTLYAIDASESLAMARRAVSLILNAFQIQDDEEKGARLGRKNLQVMDRLAKMQAHQRTLIQSLQNGIALSEKAAKAA--DDFHRKAGV-----MEVPLLKWNIVVGGASGTCSVTAKHLLFITQLIPVIGGSR 844
BLAST of NO04G01480 vs. NCBI_GenBank
Match: CBJ28875.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.0 bits (201), Expect = 1.000e-11 Identity = 105/456 (23.03%), Postives = 168/456 (36.84%), Query Frame = 0 Query: 370 IALRPDVPCGDISDLVTEVLREQGLIVRKRQGSHIVGGMKVVDKEGQEKGGICGNGIQAEWSFVDIQVALDRQDRERVLLVRFIISTETEEGGYNTDCKKIMTPSMGRRSSVAGVEGGSDEQGTLLEALKAKLFGSGLNKRALLRDVDANVSSSXXXXXXKSITLDPQYLHQLEDLAREDMHRTLEATARNLEEYVCAAEEKCEQLRLLMEPMYLQYKLEKAPSIAKALPLSFYPLDL------------------LAADGTMGGDEQISLEEKTLVDDRLAY-------------------------------IDALKETAWRCCLMQCDAEMTARMQRKNLQVLDRMAKCTEYQRLLIANLRD---NERRTSVPLFQAFKNQIGHDGGIYDDEDVETPLYYCRCIIGSRPATLFMTYEHLAFVSNVPGFGWSRQIRYDEISTCGLASLRIGITL 774 + LRPDV +SD+ V+ +GL+VR Q +V K D G +W+ V + V + R D+ R L+++F T + P + ++A G + + L A++ L V+ + S + ++LDP Y+ L + + L A LEE+V EE+ +L + P Y L P ++ PLS YPL A + GG + ++ VDD I +L W CD E AR++RK+ QV DR+ ++ LIA LRD +S P + F + + E L C+ + R L++T H+ F S+V GF R + ++T AS +G+ L Sbjct: 364 VYLRPDVTWESVSDVYMGVMLSRGLVVR-HQTEKMVTAEKSADAPG-------------DWATVKLTVGVTR-DKLRTLVIQFYADTRKQ------------APILSLAGTIARFSGRTGDD--LYTAIRNVL-------------VERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRACGL-APPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHVRGGGDSFPPQKGVDVDDENVXXXXXXXXXXXXXXXXXXXXXXXXXXSSVAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLLAVEGHREALIAALRDGAGGSAASSTPAGREFAAR-------FRPMAKEAVLCQCKAVHAKRVGQLYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDL 769
BLAST of NO04G01480 vs. NCBI_GenBank
Match: OEU16219.1 (hypothetical protein FRACYDRAFT_238807 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 75.5 bits (184), Expect = 9.500e-10 Identity = 80/298 (26.85%), Postives = 133/298 (44.63%), Query Frame = 0 Query: 514 RDVDANVSSSXXXXXXKSI-TLDPQYLHQLEDLAREDMHRTLEATARNLEEYVCAAEEKCEQLRLLMEPMYLQYKLEKAPSIAKALPLSFYPLDLLAAD------GTMGGDEQISLEEKTLVDDRLAYIDALKETAWRCCLMQCDAEMTARMQRKNLQVLDRMAKCTEYQRLLIANLRDNERRTSVPL-----------FQAFKNQIGHDGGIYDDEDVETPLYYCRCIIG-SRPATLFMTYEHLAFV-SNVPGFGWSRQIRYDEISTCGLASLRIGITLAKAIAIRAPTARVASPMP 792 RD N S+ S+ TLD QY QL L+RE+M L +A+ LEEY AE C L++PM Y + A S+ K L YPL+ L G++ + + KT D ++ +A++ +R + Q D E AR+ RKN Q+++R+A +QR I N+RD+ + + + + K + G+ ++ D PL + +G SR +++T + + FV S +P G + S + + L + PT+ + +P P Sbjct: 587 RDCSYNTLSTLPFGQFPSLPTLDVQYCSQLRRLSRENMITHLLKSAKELEEYASLAEYNCAVCITLLDPMIEHYGV-PALSLPKPKSLDEYPLEYLPPQISCPPWGSLVMEALNKVTAKTPTGD-ISLTEAVR-LVYRAFMKQDDEEQGARLGRKNAQIMERLANMQSHQRARIQNIRDSHVYSRLATESASEFLKDSQYASNKGKEGYPSIMHKD----VPLLDIKISLGASRSGRMYITAKQILFVTSYIPLLG-------------TINSTLLDLNLISFQVVSNPTSTMLNPFP 864
BLAST of NO04G01480 vs. NCBI_GenBank
Match: GBG27564.1 (Hypothetical Protein FCC1311_037872 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 65.5 bits (158), Expect = 9.800e-7 Identity = 75/260 (28.85%), Postives = 118/260 (45.38%), Query Frame = 0 Query: 533 TLDPQYLHQLEDLAREDMHRTLEATARNLEEYVCAAEEKCEQLRLLMEPMYLQY-----KLEKAPSIAKALPLSFYPLDLLAAD---GTMGGDEQISLEEKTLVDDRLAYIDALKETAWRCCL-MQCDAEMTARMQRKNLQVLDRMAKCTEYQRLLIANLRDNE-RRTSVPLFQAFKNQIGHDGGIYDDEDVETP---LYYCRCIIGSRPATLFMTYEHLAFVSNVPGFGWSRQIRYDEISTCGLASLRIGITLAKAIAI 780 +L Y+ LE+ R R L A R E+ + A E + QL L++ Y + +LE+ P I++ LPL++ D + G+ G ++ + DD A +A ++ A R L Q E++AR+ RK Q+ R C + LLI LRD+E RTS D + +E +P L + CI RP L +TY+H+ F S V GF S + ++++ G A T+ A A+ Sbjct: 325 SLHADYVRDLEEAWRLGAERKLHALVRPQEKEMLALEFQTAQLVTLIKAEYRAFGVQIPELERPPFISQ-LPLTYEDDDDGGQEENIGSKGDRGEMHADGSNNTDDERAGAEA-EDVALRSSLSRQWSREVSARVARKERQLEMRRDVCARNKTLLIQRLRDSEVARTS------------RDTLVLCNEMNISPSVVLGHVSCIFERRPGKLSVTYDHILFKSRVLGFKRSLAVPLTDVASYGGAQATGAATIVGAAAL 570 The following BLAST results are available for this feature:
BLAST of NO04G01480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01480 ID=NO04G01480|Name=NO04G01480|organism=Nannochloropsis oceanica|type=gene|length=2685bpback to top protein sequence of NO04G01480.1 >NO04G01480.1-protein ID=NO04G01480.1-protein|Name=NO04G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=895bpback to top Synonyms
Publications
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