NO04G01450, NO04G01450 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G01450
Unique Name	NO04G01450
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4370
Alignment location	chr4:450843..455212 +

Link to JBrowse

Properties


Property Name	Value
Description	Dna repair and transcription protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:450843..455212 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR024687	MMS19_C

Vocabulary: **Biological Process**
Term	Definition
GO:0097428	protein maturation by iron-sulfur cluster transfer

Homology

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BLAST of NO04G01450 vs. NCBI_GenBank
Match: ETM49626.1 (hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 202.2 bits (513), Expect = 1.100e-47
Identity = 166/586 (28.33%), Postives = 266/586 (45.39%), Query Frame = 0

Query:   68 PTSSQDASIPHLNTVLLHVQRSKRFDELVGQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGAARKEADVIA--RAVFKDVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSLLGMQTDFIRGLIDSGEGEKDPRCLILFLKVIGRAQSSFP---EAADALIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHVPAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNKETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKAN-PDSLKGRASARLLTSIARASARAYSAVLKATIPITLQLVMAGKKSKPGRVLEEEEGEKHQAALLLLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECLSS-------PASGPA--LLAVKGLASLATRSPSDLLSFSQMSSLVPLFTARL 639
            P +   A    LNTV++ V R    + L+  +G YLTS + +VR+RA  LL E+L RLP+L LT +AV   + FF+ RL+DFPS +  L AL AL  HH    +     +A    + K +H+P + Q +R+  F+++                                 +  LG Q  F +  + + EGEKDPR L+L ++V     S        +DAL++  FDV +CYFPI FTPPPNDPYGIT + L  +LR                   KL ST V AKL+A+ TL        V+ + L + A+  AL+ EV+   +  V++ A +              + V+ R K ++  G                                             A   W  F++++  +A  E++ N  DS+   ++ ++LT++ R S+ +++ VLK  +P+ ++ +             +    K +AAL  ++ LV+++D  +D S  A+  P+ P+   L   L+  LSS       P S P    +AV+ L  L T  PS +++ +Q+ +L+ LFT  L
Sbjct:   18 PENDDAAQKTGLNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELLLDSVPASKDAQDASVDDAEQSEDLGRQ--FAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVFSRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF---------SGVVARAKAQDTPG---------------------------------------------AAYAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLTALGRESSLSFAHVLKIAVPLLVEQLTNESSG------SDSVSSKCEAALARILLLVDTIDREIDQSGQAQ--PMRPHAAALIDALVNFLSSDQDNQTNPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 539

[Close]

BLAST of NO04G01450 vs. NCBI_GenBank
Match: KUF78558.1 (MMS19 nucleotide excision repair protein [Phytophthora nicotianae])

HSP 1 Score: 202.2 bits (513), Expect = 1.100e-47
Identity = 166/586 (28.33%), Postives = 266/586 (45.39%), Query Frame = 0

Query:   68 PTSSQDASIPHLNTVLLHVQRSKRFDELVGQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGAARKEADVIA--RAVFKDVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSLLGMQTDFIRGLIDSGEGEKDPRCLILFLKVIGRAQSSFP---EAADALIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHVPAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNKETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKAN-PDSLKGRASARLLTSIARASARAYSAVLKATIPITLQLVMAGKKSKPGRVLEEEEGEKHQAALLLLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECLSS-------PASGPA--LLAVKGLASLATRSPSDLLSFSQMSSLVPLFTARL 639
            P +   A    LNTV++ V R    + L+  +G YLTS + +VR+RA  LL E+L RLP+L LT +AV   + FF+ RL+DFPS +  L AL AL  HH    +     +A    + K +H+P + Q +R+  F+++                                 +  LG Q  F +  + + EGEKDPR L+L ++V     S        +DAL++  FDV +CYFPI FTPPPNDPYGIT + L  +LR                   KL ST V AKL+A+ TL        V+ + L + A+  AL+ EV+   +  V++ A +              + V+ R K ++  G                                             A   W  F++++  +A  E++ N  DS+   ++ ++LT++ R S+ +++ VLK  +P+ ++ +             +    K +AAL  ++ LV+++D  +D S  A+  P+ P+   L   L+  LSS       P S P    +AV+ L  L T  PS +++ +Q+ +L+ LFT  L
Sbjct:   18 PENDDAAQKTGLNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELLLDSVPASKDAQDASVDDAEQSEDLGRQ--FAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVFSRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF---------SGVVARAKAQDTPG---------------------------------------------AAYAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLTALGRESSLSFAHVLKIAVPLLVEQLTNESSG------SDSVSSKCEAALARILLLVDTIDREIDQSGQAQ--PMRPHAAALIDALVNFLSSDQDNQTNPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 539

[Close]

BLAST of NO04G01450 vs. NCBI_GenBank
Match: KUG01094.1 (MMS19 nucleotide excision repair protein [Phytophthora nicotianae])

HSP 1 Score: 202.2 bits (513), Expect = 1.100e-47
Identity = 166/586 (28.33%), Postives = 266/586 (45.39%), Query Frame = 0

Query:   68 PTSSQDASIPHLNTVLLHVQRSKRFDELVGQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGAARKEADVIA--RAVFKDVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSLLGMQTDFIRGLIDSGEGEKDPRCLILFLKVIGRAQSSFP---EAADALIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHVPAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNKETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKAN-PDSLKGRASARLLTSIARASARAYSAVLKATIPITLQLVMAGKKSKPGRVLEEEEGEKHQAALLLLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECLSS-------PASGPA--LLAVKGLASLATRSPSDLLSFSQMSSLVPLFTARL 639
            P +   A    LNTV++ V R    + L+  +G YLTS + +VR+RA  LL E+L RLP+L LT +AV   + FF+ RL+DFPS +  L AL AL  HH    +     +A    + K +H+P + Q +R+  F+++                                 +  LG Q  F +  + + EGEKDPR L+L ++V     S        +DAL++  FDV +CYFPI FTPPPNDPYGIT + L  +LR                   KL ST V AKL+A+ TL        V+ + L + A+  AL+ EV+   +  V++ A +              + V+ R K ++  G                                             A   W  F++++  +A  E++ N  DS+   ++ ++LT++ R S+ +++ VLK  +P+ ++ +             +    K +AAL  ++ LV+++D  +D S  A+  P+ P+   L   L+  LSS       P S P    +AV+ L  L T  PS +++ +Q+ +L+ LFT  L
Sbjct:   18 PENDDAAQKTGLNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELLLDSVPASKDAQDASVDDAEQSEDLGRQ--FAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVFSRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF---------SGVVARAKAQDTPG---------------------------------------------AAYAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLTALGRESSLSFAHVLKIAVPLLVEQLTNESSG------SDSVSSKCEAALARILLLVDTIDREIDQSGQAQ--PMRPHAAALIDALVNFLSSDQDNQTNPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 539

[Close]

BLAST of NO04G01450 vs. NCBI_GenBank
Match: ETI50002.1 (hypothetical protein, variant [Phytophthora parasitica P1569])

HSP 1 Score: 200.7 bits (509), Expect = 3.100e-47
Identity = 165/586 (28.16%), Postives = 265/586 (45.22%), Query Frame = 0

Query:   68 PTSSQDASIPHLNTVLLHVQRSKRFDELVGQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGAARKEADVIA--RAVFKDVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSLLGMQTDFIRGLIDSGEGEKDPRCLILFLKVIGRAQSSFP---EAADALIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHVPAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNKETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKAN-PDSLKGRASARLLTSIARASARAYSAVLKATIPITLQLVMAGKKSKPGRVLEEEEGEKHQAALLLLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECLSS-------PASGPA--LLAVKGLASLATRSPSDLLSFSQMSSLVPLFTARL 639
            P +   A    LNTV++ V R    + L+  +G YLTS + +VR+RA  LL E+L RLP+L LT +AV     FF+ R++DFPS +  L AL AL  HH    +     +A    + K +H+P + Q +R+  F+++                                 +  LG Q  F +  + + EGEKDPR L+L ++V     S        +DAL++  FDV +CYFPI FTPPPNDPYGIT + L  +LR                   KL ST V AKL+A+ TL        V+ + L + A+  AL+ EV+   +  V++ A +              + V+ R K ++  G                                             A   W  F++++  +A  E++ N  DS+   ++ ++LT++ R S+ +++ VLK  +P+ ++ +             +    K +AAL  ++ LV+++D  +D S  A+  P+ P+   L   L+  LSS       P S P    +AV+ L  L T  PS +++ +Q+ +L+ LFT  L
Sbjct:   18 PENDDAAQKTGLNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLTTFFADRVADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELLLDSVPASKDAQDASVDDAEQSEDLGRQ--FAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVFSRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF---------SGVVARAKAQDTPG---------------------------------------------AAYAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLTALGRESSLSFAHVLKIAVPLLVEQLTNESSG------SDSVSSKCEAALARILLLVDTIDREIDQSGQAQ--PMRPHAAALIDALVNFLSSDQDNQTNPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 539

[Close]

BLAST of NO04G01450 vs. NCBI_GenBank
Match: XP_002997950.1 (MMS19 nucleotide excision repair protein [Phytophthora infestans T30-4] >EEY67788.1 MMS19 nucleotide excision repair protein [Phytophthora infestans T30-4])

HSP 1 Score: 197.2 bits (500), Expect = 3.400e-46
Identity = 164/589 (27.84%), Postives = 266/589 (45.16%), Query Frame = 0

Query:   68 PTSSQDASIPHLNTVLLHVQRSKRFDELVGQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGAARKEADVIA--RAVFKDVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSLLGMQTDFIRGLIDSGEGEKDPRCLILFLKVIGRAQSSFP---EAADALIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHVPAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNKETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKAN-PDSLKGRASARLLTSIARASARAYSAVLKATIPITLQLV---MAGKKSKPGRVLEEEEGEKHQAALLLLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECLSS-------PASGPA--LLAVKGLASLATRSPSDLLSFSQMSSLVPLFTARL 639
            P +   A    LNTV++ V R    + L+  +G YLT+ + +VR+RA  LL E+L RLP+L LT +AV   + FF+ RL+DFPS +  L AL AL  HH    +     +A    + K +H+P + Q +R+  F+++                                 +  LG Q    +  + + EGEKDPR L+L ++V     S        +D L++  FDV +CYFPI FTPPPNDPYGIT + L  +LR                   KL ST V AKL+A+ TL        V+ + L + A+  AL+ EV+   +  V++ A +              + V+ R K ++  G                                             A   W  F++++  +A  E++ N  DS+   ++ ++L ++ R S+ +++ VLK  +P+ ++ +    +G  S P          K +AAL  ++ L++++D  +D S   +G P+ P+   L   L+  LSS       P S P    +AV+ L  L T  PS +++ +Q+ +L+ LFT  L
Sbjct:   46 PENDDAAQKTGLNTVVMQVHRHVSMEALIQALGAYLTNGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALIPKLGKTLHIPQLGQAMRKMCFDLMQLALMQSTVVELLLDSVPASKDAQDASVDDAEQSEDLGRQ--LAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVFSRSDTLLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF---------SGVVARAKAQDTPG---------------------------------------------AAYAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLAALGRESSMSFAHVLKIAVPLLVEQLNNESSGSDSVP---------SKCEAALARILLLIDTIDREIDQS--GQGQPMRPHAAALIDALVNFLSSDHDNQTKPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 567

[Close]

BLAST of NO04G01450 vs. NCBI_GenBank
Match: XP_024578924.1 (DNA repair/transcription protein Mms19 [Plasmopara halstedii] >CEG42555.1 DNA repair/transcription protein Mms19 [Plasmopara halstedii])

HSP 1 Score: 189.5 bits (480), Expect = 7.100e-44
Identity = 321/1368 (23.46%), Postives = 508/1368 (37.13%), Query Frame = 0

Query:   68 PTSSQDASIPHLNTVLLHVQRSKRFDELVGQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGAARKEADVIARAV--FKDVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSL-LGMQTDFIRGLIDSGEGEKDPRCLILFLKVIGRAQSSFP---EAADALIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHVPAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNKETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKAN-PDSLKGRASARLLTSIARASARAYSAVLKATIPITLQLVMAGKKSKPGRVLEEEEGEKHQAALLLLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECL---------SSPASGPALLAVKGLASLATRSPSDLLSFSQMSSLVPLFTARLQAEERSVGPAYDPDLAQSLLQGLMALSSRRKMYTIAVLTHTLPELLTWMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGLELERCLGALATLAGQAEVFQAVVPSLLNRVLVSPPTGGAPVG-VEGEGWTKGGQVISSALKGGEGVTQILS---SLASIFVSTSEANPAALPALLALPPSTLPASFISPSSAATGTAVDVGKEPSXXXXXXXXXXXXXXXXXXXXXXXXXSAAQGRILDDAALEATLRIFGAVTEALPPTLQDLFAFRLLRFFFPSSSSFLSSSSIFDVLDPSPPPAPGPSITGLQPLLPSTYPSQAQALSLLLTVLGSLYISSPIFASSGIQDALLPALIRLTLSEAQEADSRSSPTGSYSTSAPLSSSSCFPDPACWGVALVVNKTAKEEVVAEAVATLLSGFKQRLATATSXXXXXXXXXXXXXXXXXXLATARKDVASLIWLAKALALRCAPKKSMEEAVSSLIYVAGC---------PGGTGTGEREVESAEIEPSSARLALARQAAEGFGLILRDAVPSSSSXXXXXXXXXLIERLLAPRPGTSRVNPLWRQRLYYLAFPRLREAVDKHRARSQAKAAALLAVCTLVGSLPQAVIQAELEPIMLVVLQGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARATETFVALVKNSPEAVVPHLATAIPLLYQLCTPSDPHFLPKAKLRVLALGSLMEIARLPYAKLHPYRATVSRGLLAPLDDRKRVVRQMAVKVRNEWMMM 1407
            P +   +    LNTV++ V R    + L+  +G +LTS + +VR+RA  LL E+L RLP+L L  +AV   ++FF+ RL+DFPS +  L  L AL  HH          I+  V     +H+P + Q +R+  F+ LF +T A                            +   G Q  F +  + + EGEKDPR L+L + V     S           L++  FD+ +CYFPI F PPPNDPYGIT D L  +LR                   KL+ST   AKL+A+ TL        ++ + L + A+T AL+ EV+   +  V++ AL+              + V+ R K +E  G                                             A   W+ F++E+  +AV E++ +  DS+   ++ ++L ++ R S+ +++ VL+  IP+   L+   K    G   E    E     +LLLVD   S+D  +D S  A+  P+ PY P L   L+  L         S  +     +AV+ L  L T  PS ++   Q+ +LV LFT  L  +     PA   ++    LQ L  +S+        VLT      ++  +                                                       +  L A+  L  ++ VFQA +  L++  +         +G  E +G     + ++  L+    + +I +       I V++S +       L A+            +SA   TA+    + S                                +D+A L A  RIF AV + +    Q     RL+    P   +FL +        PS      P+   L PL  +   S A+ +++L                       L  +I   L  AQ          S+      S ++   D A   +A +VNK          V  LL    Q+LA   S                  L      +    W+ KAL LR            + I+ A C         P G           E    +   AL  + A  F L++ D  P                  +  R   + V  L+RQR++ + FP L + +  H+   +   AA++A+  ++   P+ V    L  I  +++  +                               + A +TF  L+  S E+  P L    P L +        F   AK R  AL  L ++A +PY  +HPY++ V + LL  LDDRKR+VR MAV+VRN+W ++
Sbjct:   18 PENDDSSQKTGLNTVIMQVHRQVTIEALIQALGVHLTSGDDKVRSRATLLLAEVLTRLPELQLMPSAVQLLLNFFADRLADFPSASACLRGLLALETHHAAQIPSPRTTISLMVKLGSILHIPQLGQAMRKMCFD-LFNLTLAQPMVIELLRNSVTADRNTQDTMVDDAKQNEDFGRQ--FTQTFLTAMEGEKDPRNLLLCMHVARTLLSQLELVFSCNTLLLQQYFDIVSCYFPIIFAPPPNDPYGITSDSLILSLRHAFAASDLLAPFVVPFLLKKLSSTVAEAKLDAIQTLVFCAERYSINVLLLQIEAITIALYDEVLDGGKQEVIAEALQAISRF---------SGVVARAKTQEIPG---------------------------------------------ATYAWRLFVVEMTARAVGELRGHAADSMVSVSAGQVLAALGRESSLSFAHVLQIAIPL---LIEQFKIESTGSGSETSRCEAALGRILLLVD---SIDREIDQSCQAQ--PMRPYAPVLINALVTFLGGDEDNAMESGTSPTARCVAVEALCHLLTFPPSPIVDVMQVRTLVTLFTRMLLLD-----PAL--EVRNVCLQSLKGIST--------VLTENSITTISPGELSTHSGYAVFVVEISLARLMATVNACACNADGNDEDNADVSAIISASNRDFNSLFDEVLVAITELCRESSVFQATIVHLIDLCVERDDRKQTDIGFYEADGDDTRQRHLNRILEAVAEIVEINNGDRKSMEICVNSSSSTSIIFRLLTAV-----------ETSATRATALTGNDKLS-------------------------------FVDNAKLSACARIFRAVMQNVSSATQQ----RLIDTMVP---AFLRT-------QPSE-----PAFIQLVPLFAAVINSVARNVTIL----------------------DLSLVINRLLELAQSCAVAVLEAKSHQLQNIFSDAA---DSAAKALASIVNKMPDGADFDSTVNMLL---YQKLAAVIS-------------KSVESLTVRVAALQIYAWIVKALVLR-----------GNTIHAAECLRFLCNFLTPEGRKIDSYVNMEEECANDAQAAALRMEVARTFKLLVSD-YPD-----------------VLNRKCGAIVMFLYRQRMFNVVFPMLLDYIQFHKG-EETSVAAMVALAQVIAHSPKTVYLPHLAQIFPLMVHALKTDDRELG-----------------------SAAIQTFKLLLLESVESAKPFLKDVFPGLLK-----QAQFGLGAKDRHAALECLAKLANIPYELVHPYKSVVLQKLLLVLDDRKRLVRHMAVRVRNQWSIL 1145

[Close]

BLAST of NO04G01450 vs. NCBI_GenBank
Match: CBN77017.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 182.6 bits (462), Expect = 8.600e-42
Identity = 200/751 (26.63%), Postives = 287/751 (38.22%), Query Frame = 0

Query:   61 PPPSSFL-PTSSQDASIPHLNTVLLHVQR--SKRFDELV-GQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGA------------------------------ARKEADVIARAVFKDVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSLLGMQTDFIRGLIDSGEGEKDPRCLILFLKVIGRAQSSF-PEAADALIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHVPAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNKETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKAN-PDSLKGRASARLLTSIARASARAYSAVLKATIPITLQ-------------------------------------------------LVMAGKKSKPGRVLEEEEGEKHQAALL-LLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECLSS--------------------------------PASGPALLAVKGLASLATRSPSDLLSFSQMSSLVPLFTARLQAEERSVG---------PAYDPDLAQSLLQGLMALSSRRKMYTIAVLTHTLPELL 685
            P   SF+ PT  +D     LN V+L++ R  +  F+ LV  Q+G YL++ + +VR RA  LL E+L RLP LPL  A+   F  FFSSRL D+PSV  +L AL  LL++H  A                                  A VIAR VF+++H+P+++Q+IRQ A  VL  +                                  GM   F+ GL+ S EGEKDPRCLI+ L  + + Q  F P       EAVFD TACYFP+TFTPPPNDP+ I+PD L   L                    KL+S    AK  +L  +   VR  G   + ++L A+ GA+ +E                    A H S+P                              D+AA + +   +  +ET   A  +   E   A  +W+A    +++ AV+EV  + P S+ GR SAR+L ++A +SA    + L   +P  L+                                                               + E  E  Q A L  L  L  +VD  +DFS +  G P+ PYV  L +     L+                                        LA +GL+ + TR P+ L+   ++  +V    A L +     G                  ++L  L ++  RR  Y  AVL   +P LL
Sbjct:   18 PNVDSFINPTKGEDEHRSALNAVVLNIHRAGAGAFEGLVTNQLGEYLSNPDTKVRERATLLLAELLARLPTLPLAAASAARFAGFFSSRLGDYPSVVPALKALSDLLKNHSPALFGGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGVIARGVFEELHLPALSQSIRQAALSVLLALV----------------------THPGFTEALSSGMGKTFVDGLVGSLEGEKDPRCLIVGLSALRKTQQGFDPAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEE--------------------AVHGSDP------------------------------DLAALALLSLTEVVRETASHAVFAGLGE---ACPEWRALANPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAEAFEDAQTARLGALAGLAAAVDDKVDFSGSQGGAPLQPYVDPLLSEFSAALTGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLASRGLSDVITRPPASLVEEGKIQDVVRSLVAVLASPGAWEGGXXXXXXXXXXXXXXXXXAVLTALRSIGLRRPEYARAVLDTAVPPLL 693

[Close]

BLAST of NO04G01450 vs. NCBI_GenBank
Match: XP_009834274.1 (hypothetical protein H257_09676 [Aphanomyces astaci] >ETV76149.1 hypothetical protein H257_09676 [Aphanomyces astaci])

HSP 1 Score: 177.2 bits (448), Expect = 3.600e-40
Identity = 161/580 (27.76%), Postives = 251/580 (43.28%), Query Frame = 0

Query:   68 PTSSQDASIPHLNTVLLHVQRSKRFDELVGQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGAARKEADV--IARAVFK-DVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSLLGMQTDFIRGLIDSGEGEKDPRCLILFLKVIGRAQSSFPEAADA-LIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHV-PAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNKETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKANP-DSLKGRASARLLTSIARASARAYSAVLKATIPITLQLVMAGKKSKPGRVLEEEEGEKHQAALLLLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECLS------SPASGPALLAVKGLASLATRSPSDLLSFSQMSSLVPLFT 636
            P + +     HLN V++ + R+    +L+  +GP LT  + + R+RA  LL E+L RLP+L L     H  + FF  RL+D PS+   L AL ALL  H  AA   AD+  +  ++F     +P++ Q +R++ F++   M   LE                                   + G + + +GEKDPR L+L L++     ++FP   DA LI   F VT+CYFPITF PPPNDPYGIT   L  ALR                   KL+ T V    ++ L TL        ++ +      +   +++ ++     AV++ A  T R +A  +S P                                                     S P  +ALA   W  F++ +VQ A+ +++    DS+    +A +LT +A  SA   + VL++++P  L  V A   + P         +  +AAL  LV L++ +D  +D       PP+ P+V  + A L++         + +S P  L ++GLA L  R PS LL    + SLV L+T
Sbjct:   18 PENGESQHTTHLNNVVMQIHRNTSIQDLITLLGPQLTHVQDKRRSRATLLLAEVLTRLPELKLAADTTHLLLVFFVERLADTPSLGPCLKALSALLSFH-AAAVPAADILLLLESLFSLPSPIPTLGQAMRKQCFQL---MNIVLELNVVDTHGARV-----------------------LMEGFLAAMDGEKDPRNLLLCLQLASALLTAFPSNVDADLIRLFFHVTSCYFPITFKPPPNDPYGITSAQLVAALRSVFIAHDSMAKHVVPMVLDKLSRTTVTDMTVDMLDTLAFCCTRYPLNRLLTQFTPVATTVYRSILHGDNQAVIAAATATLRAIAKAVSPPS----------------------------------------------------SLPGMQALA---WSKFVVHVVQTALRDMQDQAMDSMVSLRAATVLTGVAAQSAAGLTYVLESSLPFLLSRVSAAAAALPTSSCCSTSSQL-EAALACLVGLLDCIDVDVDHVT----PPVLPHVQPIQAALVQSFHFASAHVASSSRPQRLCLQGLAKLVLRPPSPLLQDDSVHSLVDLWT 510

HSP 2 Score: 64.3 bits (155), Expect = 3.400e-6
Identity = 56/198 (28.28%), Postives = 88/198 (44.44%), Query Frame = 0

Query: 1210 VNPLWRQRLYYLAFPRLREAVDKHRARSQAKAAALLAVCTLVGSLPQAVIQAELEPIMLVVLQGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARATETFVALVKNSPEAVVPHLATAIP-LLYQLCTPSDPHFLPKAKLRVLALGSLMEIARLPYAKLHPYRATVSRGLLAPLDDRKRVVRQMAVKVRNEWMMM 1407
            ++P+ RQR + L FP L       +   + +   LL    +V   P A++   +  I+ +V+  ++                                A  TF    ++ P+ V  +L    P LL+Q             K R+ ALG L  +A++ Y  +HP++  V +GLLA LDDRKR VRQ AVKVRN+W ++
Sbjct:  919 ISPVHRQRTFSLLFPLLTT-----KENMEKRVVTLL----VVAHTPHAILLPHVLDIVPLVVDALNLKEPPYAALLGHP-------------------ALVTFEMCFQHDPQLVYGYLNQLFPGLLWQ------SQHCHAVKDRLRALGCLASLAKIKYELIHPHKERVIKGLLAALDDRKRTVRQAAVKVRNQWSIL 1082

[Close]

BLAST of NO04G01450 vs. NCBI_GenBank
Match: POM71145.1 (MMS19 nucleotide excision repair protein, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 173.7 bits (439), Expect = 4.000e-39
Identity = 132/469 (28.14%), Postives = 214/469 (45.63%), Query Frame = 0

Query:   68 PTSSQDASIPHLNTVLLHVQRSKRFDELVGQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGAARKEADVIA--RAVFKDVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSLLGMQTDFIRGLIDSGEGEKDPRCLILFLKV----IGRAQSSFPEAADALIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHVPAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNKETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKAN-PDSLKGRASARLLTSIARASARAYSAVLKATIPITLQ 530
            P +   A    LNTV++ V R+   + L+  +G YLTS + +VR+RA  LL E+L RLP+L LT +AV   + FF+ RL+DFPS +  L AL AL  HH          +A    +   +H+P + Q +R+  F+++                                 +  LG Q  F +  + + EGEKDPR L+L ++V    + + ++ F   +DAL++  FD+ +CYFPI FTPPPNDPYGIT + L  +LR                   KL ST V AKL+AL TL        V+ + L + A+  AL+ EV+   +  V++ A    R+  +  S      V+ R + ++  G                                             A   W  F++E+  +A  E++ N  DS+   ++ ++L ++   S+ +++ VLK  +P+ ++
Sbjct:  427 PENDDAAQKTGLNTVVMQVHRTVTMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLLTFFADRLADFPSASACLRALLALETHHAAQVSSPRTTVALILKLGSTLHIPQLGQAMRKMCFDLMQLALAQSTVVELLLDSVPANKDAQDASVDDAEQSEDLGRQ--FAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEAVF-SRSDALLQQYFDIVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDALQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEA----RLAISRFS-----GVVARARAQDTPG---------------------------------------------AAYAWSKFVVEMTARAAGELRENAADSMVSVSAGQVLAALGHDSSMSFAHVLKIAVPLLVE 838

[Close]

BLAST of NO04G01450 vs. NCBI_GenBank
Match: KUF97101.1 (hypothetical protein AM588_10008074 [Phytophthora nicotianae])

HSP 1 Score: 171.0 bits (432), Expect = 2.600e-38
Identity = 117/364 (32.14%), Postives = 175/364 (48.08%), Query Frame = 0

Query:   68 PTSSQDASIPHLNTVLLHVQRSKRFDELVGQMGPYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFPSVAGSLLALRALLQHHGGAARKEADVIA--RAVFKDVHVPSMTQTIRQRAFEVLFEMTGALEXXXXXXXXXXXXXXXXXXXXXXXIPTSLLGMQTDFIRGLIDSGEGEKDPRCLILFLKVIGRAQSSFP---EAADALIEAVFDVTACYFPITFTPPPNDPYGITPDMLAQALREXXXXXXXXXXXXXXXXXXKLTSTHVPAKLEALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRVLAAHLSNPDDANVIGRGKRRERTGSS 427
            P +   A    LNTV++ V R    + L+  +G YLTS + +VR+RA  LL E+L RLP+L LT +AV   + FF+ RL+DFPS +  L AL AL  HH    +     +A    + K +H+P + Q +R+  F+++                                 +  LG Q  F +  + + EGEKDPR L+L ++V     S        +DAL++  FDV +CYFPI FTPPPNDPYGIT + L  +LR                   KL ST V AKL+A+ TL        V+ + L + A+  AL+ EV+   +  V++ A +              + V+ R K ++  G++
Sbjct:   18 PENDDAAQKTGLNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELLLDSVPASKDAQDASVDDAEQSEDLGRQ--FAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVFSRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF---------SGVVARAKAQDTPGAA 370

HSP 2 Score: 71.6 bits (174), Expect = 2.200e-8
Identity = 60/194 (30.93%), Postives = 85/194 (43.81%), Query Frame = 0

Query: 1213 LWRQRLYYLAFPRLREAVDKHRARSQAKAAALLAVCTLVGSLPQAVIQAELEPIMLVVLQGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARATETFVALVKNSPEAVVPHLATAIPLLYQLCTPSDPHFLPKAKLRVLALGSLMEIARLPYAKLHPYRATVSRGLLAPLDDRKRVVRQMAVKVRNEWMMM 1407
            L+RQRL+ L FP L E +  H    +   AAL+A   ++   P+A+    L  I  +++Q                                         AL  +  E+  P L    P L +        F P AK R  AL  L ++A +PY  +HPY+  V R LL  LDDRKR+VR MAV+VRN+W ++
Sbjct:  815 LYRQRLFDLVFPVLLEYIRAH-IGEETSVAALVAFAQVIAHSPKAIYLPHLAQIFPLMVQ-----------------------------------------ALKTDDLESAKPFLKDVFPGLLK-----QAQFGPAAKDRHAALECLAKLATIPYELVHPYKDIVLRKLLLVLDDRKRLVRHMAVRVRNQWSIL 961

The following BLAST results are available for this feature:

BLAST of NO04G01450 vs. NCBI_GenBank

BLAST of NO04G01450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
ETM49626.1	1.100e-47	28.33	hypothetical protein, variant [Phytophthora parasi...	[more]
KUF78558.1	1.100e-47	28.33	MMS19 nucleotide excision repair protein [Phytopht...	[more]
KUG01094.1	1.100e-47	28.33	MMS19 nucleotide excision repair protein [Phytopht...	[more]
ETI50002.1	3.100e-47	28.16	hypothetical protein, variant [Phytophthora parasi...	[more]
XP_002997950.1	3.400e-46	27.84	MMS19 nucleotide excision repair protein [Phytopht...	[more]
XP_024578924.1	7.100e-44	23.46	DNA repair/transcription protein Mms19 [Plasmopara...	[more]
CBN77017.1	8.600e-42	26.63	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_009834274.1	3.600e-40	27.76	hypothetical protein H257_09676 [Aphanomyces astac...	[more]
POM71145.1	4.000e-39	28.14	MMS19 nucleotide excision repair protein, partial ...	[more]
KUF97101.1	2.600e-38	32.14	hypothetical protein AM588_10008074 [Phytophthora ...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL079	nonsL079	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR059	ncniR059	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR109	ngnoR109	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK009668	NSK009668	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO04G01450.1	NO04G01450.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|578449	gene_1932	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100009g28	gene2037	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO04G01450.1	NO04G01450.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO04G01450 ID=NO04G01450|Name=NO04G01450|organism=Nannochloropsis oceanica|type=gene|length=4370bp
AATAGAAGAACCTACGTCATGACTACATTGGCACTGAGTAGCTTGGCATC
GGGAATTTCAGGGAGTGGGGATGGAGCTAGCAATACCCTATCCTCGTCTC
CCTTCTCGACCTCCTCTCAAGCGCTGTCGCAAGCCCTCGCTGCATACTGC
GCGGCCGTCGACCCTACTGCAGGGACCGCTGGGGAAGGGACGAAGCCCCC
ACCACCTTCCTCCTTTTTACCCACGTCTTCTCAAGACGCCTCCATTCCGC
ACCTTAACACGGTACTCCTGCATGTACAACGTAGCAAGCGCTTCGACGAA
TTGGTGGGGCAAATGGGGCCTTACCTCACGAGCGAGGAAGGACGAGTTCG
AACCCGCGCCGCTGCGTTGTTGGGTGAAATCTTGAACCGCCTTCCAAAGC
TACCTCTCACCTGCGCGGCTGTCCACCACTTTGTGGATTTCTTTTCGAGT
CGCCTCTCCGATTTCCCCTCTGTAGCCGGCTCGCTCTTAGCCTTGCGTGC
CCTGCTCCAACACCACGGAGGGGCGGCCAGAAAGGAGGCCGATGTCATTG
CCCGTGCTGTATTCAAGGACGTGCATGTCCCCTCCATGACGCAAACGATT
CGACAACGAGCCTTTGAGGTCCTGTTTGAGATGACGGGTGCGTTGGAGGA
AGAGGAGAAGGAGGACGAGCAGCCGCAGCAGCCGCAGCGGAAAGGCGGGG
ACGAGAGCAGTAGCACTATTCCCACTAGCTTGCTAGGGATGCAAACAGAC
TTCATTCGCGGGCTGATTGATAGCGGGGAAGGCGAGAAGGATCCACGTTG
CCTGATCCTCTTCCTCAAAGTCATCGGCCGTGCCCAGTCGTCCTTTCCCG
AGGCCGCCGACGCCCTCATCGAAGCCGTCTTCGATGTGACCGCCTGCTAC
TTCCCTATCACCTTCACCCCTCCTCCCAACGACCCCTACGGCATCACGCC
CGACATGCTGGCACAAGCCTTGCGAGAAGCCTTGACATCCCGCCCGTCCA
TGGCCCCGCTCCTCCTTCCCCTCCTGGTCGACAAACTCACATCTACCCAC
GTCCCGGCCAAATTGGAAGCGCTCCTCACCCTTCAGACGGCCGTACGGAC
ACTTGGGGTGCATACCATGCGCTTGAATCTCCCTGCGCTTACTGGGGCGT
TATTTCAAGAGGTAGTATCATGTCCCGAGGCAGCAGTAGTGTCCCACGCG
CTGGAAACGTGTCGAGTACTGGCTGCGCATCTGTCAAATCCGGATGATGC
AAACGTCATAGGAAGAGGAAAAAGGCGGGAGAGGACAGGCAGCAGCAGCA
AAAGCAGAAACAAGAAAATCAAAGAAGAAGCAGATGTAGCAGCAGAAAGC
TGCATTGACAGCAACAAAGAAACACAGGAGACAAGGGAAGGTGCGGACCT
CAGTCGACCAGACGAGCGCGCCCTCGCCGAAGCCGATTGGCAAGCTTTTC
TACTCGAGATCGTCCAGAAAGCCGTATCGGAGGTCAAAGCCAACCCAGAC
TCCCTCAAAGGTCGTGCCAGTGCTCGCCTTCTTACCTCTATAGCTCGCGC
CTCCGCCCGTGCTTACTCCGCTGTATTGAAAGCCACCATCCCTATCACCC
TCCAGCTCGTCATGGCTGGCAAGAAATCCAAACCCGGACGAGTCCTTGAA
GAAGAGGAAGGCGAGAAGCATCAAGCCGCTCTCCTCCTTCTCGTCGATTT
GGTGGAGTCCGTGGACCCTTCCCTTGACTTCAGCGCAACAGCCGAAGGCC
CTCCTATCTCCCCCTATGTGCCGCAACTCTATGCAACCCTCCTTGAATGC
CTCAGTTCCCCTGCTTCAGGCCCTGCCTTACTAGCGGTCAAAGGGCTCGC
GTCTCTTGCCACGCGCTCTCCTTCGGACCTCCTTTCTTTTTCGCAAATGT
CCTCCCTCGTCCCTTTGTTCACGGCACGATTGCAAGCTGAGGAACGCTCC
GTGGGCCCTGCTTATGACCCCGACCTGGCCCAGTCATTACTACAGGGGTT
GATGGCACTCAGCTCGCGACGAAAGATGTACACGATAGCTGTCTTGACCC
ATACGTTGCCGGAGTTGTTGACGTGGATGGATGAGGCGGCTGCTGCCGGT
GCTGCAGGGGAGAGAAAAGGAGGAACGGATACGACGACGACGACGACGAC
GACGACGACGAAATGTAGCATCGCTGCAGTTGCAAACGGTGTAAGAGCCA
GTGACAAAAGCAGTGGTAACAGCAGCAGCAGCAATGGGCTAGAACTGGAA
CGATGTTTGGGTGCGTTGGCGACTTTGGCAGGTCAGGCCGAAGTCTTCCA
AGCCGTCGTTCCCTCCTTGCTCAATCGTGTCTTGGTCTCTCCTCCTACAG
GAGGAGCACCGGTGGGGGTGGAAGGCGAGGGATGGACGAAGGGAGGGCAA
GTTATCTCGAGTGCGTTGAAGGGGGGGGAAGGGGTGACGCAGATTTTGTC
CTCTTTGGCTTCCATTTTTGTATCGACCAGTGAGGCGAACCCTGCAGCCT
TGCCTGCTCTTTTAGCGTTACCACCATCGACCCTGCCTGCTTCATTTATT
TCGCCTTCCTCCGCAGCAACAGGTACAGCCGTGGATGTGGGGAAGGAACC
ATCTGCCACTGCGGCTTCCTCTCCTTCCTCCTCTTCCTCCTCCTCTTGCC
TCTGGTCCTTACTAACAGCCCTTCTCTCCTCCGCAGCCCAAGGACGCATT
CTGGACGACGCTGCTCTAGAAGCAACTCTCCGCATATTTGGCGCAGTCAC
CGAAGCTCTTCCCCCCACCCTTCAAGACCTTTTCGCGTTTCGCCTTCTCC
GTTTTTTTTTCCCCTCCTCATCCTCCTTCTTGTCCTCGTCCTCAATCTTT
GACGTCCTCGACCCCTCCCCTCCCCCGGCTCCAGGCCCCAGCATCACTGG
CCTCCAACCCCTCCTTCCCTCTACCTACCCCTCACAAGCACAAGCCCTCT
CTCTTCTTCTGACCGTTCTCGGTTCTCTTTACATTTCATCCCCCATCTTC
GCATCTTCAGGGATTCAAGACGCCCTTCTTCCTGCCCTCATCCGCCTAAC
CTTGTCAGAAGCACAAGAAGCAGACAGCAGGAGCAGCCCCACTGGCAGCT
ATTCTACCAGCGCTCCACTTTCTTCTTCTTCGTGCTTTCCCGACCCGGCC
TGTTGGGGAGTAGCTCTCGTCGTGAATAAAACAGCGAAGGAAGAAGTAGT
CGCAGAGGCAGTCGCCACCCTCCTCTCAGGCTTTAAGCAACGGCTCGCCA
CTGCGACCAGTTGCAGCAACAGTAGCAGCTGCAGCAACAGCAGCAGCAGC
AGCAGTGATAGTATTTTGGCAACAGCGAGAAAGGACGTTGCATCCTTGAT
CTGGTTGGCCAAAGCGCTGGCCCTTCGGTGCGCCCCAAAGAAGTCAATGG
AAGAGGCGGTCTCGTCGCTCATCTACGTGGCAGGGTGTCCCGGAGGAACA
GGAACAGGAGAAAGAGAAGTTGAATCAGCGGAAATAGAGCCATCTTCTGC
CCGTCTAGCCTTAGCTCGACAAGCTGCAGAAGGATTTGGTCTCATCCTCC
GGGATGCAGTGCCCTCGTCATCCTCCTCCCTCCCTTCTTCCTCCTCATCC
TCACTCATCGAGCGCCTGCTCGCCCCGCGTCCGGGCACCTCTCGAGTCAA
CCCCCTCTGGCGGCAACGGCTCTACTACCTGGCTTTTCCACGTCTACGGG
AAGCTGTGGATAAACACCGTGCCCGATCACAGGCAAAAGCAGCGGCTTTG
CTGGCGGTGTGTACCCTGGTGGGTTCGTTGCCCCAAGCCGTTATCCAGGC
CGAGCTCGAGCCTATCATGCTCGTGGTCCTGCAGGGAATGTCGTCTGTGT
CGAGCAAAAGCGGCAACAACGACAGCAGCAATGGTTCAGAGGAGGAGGAG
GTGGAAGAGAAGGAAATCGTAGTTGTTCTCAGGGCGCGGGCGACTGAGAC
ATTTGTTGCGCTGGTCAAGAACTCTCCCGAGGCAGTAGTGCCGCATCTTG
CCACTGCAATTCCTTTGCTTTATCAACTTTGCACCCCTTCTGACCCCCAC
TTTTTGCCCAAGGCGAAGCTGCGTGTGTTGGCGCTGGGGAGTTTGATGGA
GATAGCTCGGTTGCCTTATGCCAAATTGCATCCCTACAGGGCGACGGTTA
GTAGGGGGCTGCTTGCCCCATTGGATGATCGGAAGCGGGTGGTGAGGCAG
ATGGCGGTGAAGGTAAGGAATGAATGGATGATGATGGATAGATAGGTGAA
CGTGAAGAATCAGGAGAAGGCTTAGCGGGTAGGTCAAATGGTCCAAATTT
GATAAGGAGGCTAGCTCTTGAAGATAGACAGAAAATAGTTTTGATAAATC
ACCAAAAACAACAAGTAACA

protein sequence of NO04G01450.1

>NO04G01450.1-protein ID=NO04G01450.1-protein|Name=NO04G01450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1409bp
MTTLALSSLASGISGSGDGASNTLSSSPFSTSSQALSQALAAYCAAVDPT
AGTAGEGTKPPPPSSFLPTSSQDASIPHLNTVLLHVQRSKRFDELVGQMG
PYLTSEEGRVRTRAAALLGEILNRLPKLPLTCAAVHHFVDFFSSRLSDFP
SVAGSLLALRALLQHHGGAARKEADVIARAVFKDVHVPSMTQTIRQRAFE
VLFEMTGALEEEEKEDEQPQQPQRKGGDESSSTIPTSLLGMQTDFIRGLI
DSGEGEKDPRCLILFLKVIGRAQSSFPEAADALIEAVFDVTACYFPITFT
PPPNDPYGITPDMLAQALREALTSRPSMAPLLLPLLVDKLTSTHVPAKLE
ALLTLQTAVRTLGVHTMRLNLPALTGALFQEVVSCPEAAVVSHALETCRV
LAAHLSNPDDANVIGRGKRRERTGSSSKSRNKKIKEEADVAAESCIDSNK
ETQETREGADLSRPDERALAEADWQAFLLEIVQKAVSEVKANPDSLKGRA
SARLLTSIARASARAYSAVLKATIPITLQLVMAGKKSKPGRVLEEEEGEK
HQAALLLLVDLVESVDPSLDFSATAEGPPISPYVPQLYATLLECLSSPAS
GPALLAVKGLASLATRSPSDLLSFSQMSSLVPLFTARLQAEERSVGPAYD
PDLAQSLLQGLMALSSRRKMYTIAVLTHTLPELLTWMDEAAAAGAAGERK
GGTDTTTTTTTTTTKCSIAAVANGVRASDKSSGNSSSSNGLELERCLGAL
ATLAGQAEVFQAVVPSLLNRVLVSPPTGGAPVGVEGEGWTKGGQVISSAL
KGGEGVTQILSSLASIFVSTSEANPAALPALLALPPSTLPASFISPSSAA
TGTAVDVGKEPSATAASSPSSSSSSSCLWSLLTALLSSAAQGRILDDAAL
EATLRIFGAVTEALPPTLQDLFAFRLLRFFFPSSSSFLSSSSIFDVLDPS
PPPAPGPSITGLQPLLPSTYPSQAQALSLLLTVLGSLYISSPIFASSGIQ
DALLPALIRLTLSEAQEADSRSSPTGSYSTSAPLSSSSCFPDPACWGVAL
VVNKTAKEEVVAEAVATLLSGFKQRLATATSCSNSSSCSNSSSSSSDSIL
ATARKDVASLIWLAKALALRCAPKKSMEEAVSSLIYVAGCPGGTGTGERE
VESAEIEPSSARLALARQAAEGFGLILRDAVPSSSSSLPSSSSSSLIERL
LAPRPGTSRVNPLWRQRLYYLAFPRLREAVDKHRARSQAKAAALLAVCTL
VGSLPQAVIQAELEPIMLVVLQGMSSVSSKSGNNDSSNGSEEEEVEEKEI
VVVLRARATETFVALVKNSPEAVVPHLATAIPLLYQLCTPSDPHFLPKAK
LRVLALGSLMEIARLPYAKLHPYRATVSRGLLAPLDDRKRVVRQMAVKVR
NEWMMMDR*

Synonyms

Publications