NO04G01400, NO04G01400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01400 vs. NCBI_GenBank
Match: WP_090932914.1 (methyltransferase domain-containing protein [Pelosinus propionicus] >SFL43584.1 carbamoyltransferase [Pelosinus propionicus DSM 13327]) HSP 1 Score: 92.8 bits (229), Expect = 5.300e-15 Identity = 63/217 (29.03%), Postives = 99/217 (45.62%), Query Frame = 0 Query: 445 DPVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAYDIVLSNPPYIPNPERSARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERWWND 662 +PVMY+G DSLGLV +P Y + + LDLC G G+Q I +++V +++NPRA+RFA FNA LN + T + TP + +D +L+NPP++P+P+ + + DGG GE++ + +V A LS G L++V +LVNV E++ +WW + Sbjct: 883 NPVMYIGMDSLGLVHTVPKYPS------------------------KNTLDLCTGSGIQAITASCYS---------------------KKVVGIDINPRAIRFARFNAQLNGISNITFA---EGNLYTP--IGKEKFDTILANPPFVPSPDNNL----DFRDGGNNGEKLLEVIVKNADVHLS-------NAGKLFIVTDLVNVHQYEEKLNQWWGE 1038
BLAST of NO04G01400 vs. NCBI_GenBank
Match: OLQ03769.1 (putative protein methyltransferase MJ0928 [Symbiodinium microadriaticum]) HSP 1 Score: 92.0 bits (227), Expect = 9.000e-15 Identity = 66/217 (30.41%), Postives = 102/217 (47.00%), Query Frame = 0 Query: 443 GFDPVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAYDIVLSNPPYIPNPER-SARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERW 659 GF+PVMY+ DSL L+ P+ VKE LSV LD+C G GVQG+ + +++NPRA+ F FN A+N L + L H T +D++LSNPP++PNP+ +++ + YG+GG +GEE+ + +VA L + G L+LV N++ +PER++R+ Sbjct: 379 GFEPVMYLSDDSLALLDVAPA------VKE--------------LSV----LDMCCGGGVQGLSALRRGA--------------------RDVTFVDVNPRAIHFVHFNLAINGLDTERCRL-HQGNTFDALPAAEEKFDLILSNPPFLPNPDNIASQAVAAYGNGGASGEEVLETIVAGCPNWL-------KPGGRLWLVTYAPNIEEMPERLQRY 543
BLAST of NO04G01400 vs. NCBI_GenBank
Match: BAZ12518.1 (RNA methyltransferase, TrmA family protein [Calothrix sp. NIES-4071] >BAZ58663.1 RNA methyltransferase, TrmA family protein [Calothrix sp. NIES-4105]) HSP 1 Score: 92.0 bits (227), Expect = 9.000e-15 Identity = 63/218 (28.90%), Postives = 95/218 (43.58%), Query Frame = 0 Query: 445 DPVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAYDIVLSNPPYIPNPERSARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERWWNDG 663 D VMYVG DS GLV P Y A R+LDLC G G+Q + +++V +++NPRA+RFA FNA LN + L + T + +D +L+NPP++P+P + R + D G GEEI ++ +A L+ G L++V +LVN+ ++E+WW G Sbjct: 75 DVVMYVGMDSTGLVHTAPQYPA------------------------NRVLDLCCGSGIQSLVASRYT---------------------KEVVGVDINPRAIRFARFNAQLNGISNTHFCLGNLYETTS------GYFDTILANPPFVPSPSQECR----FRDSGVAGEEILARIITESANHLAPL-------GKLFIVSDLVNIQQYESKLEQWWQGG 230
BLAST of NO04G01400 vs. NCBI_GenBank
Match: WP_007935942.1 (MULTISPECIES: methyltransferase domain-containing protein [Pelosinus] >EIW17492.1 Carbamoyltransferase [Pelosinus fermentans B4] >EIW23552.1 Carbamoyltransferase [Pelosinus fermentans A11] >OAM92047.1 Carbamoyltransferase [Pelosinus fermentans DSM 17108] >SDQ31899.1 carbamoyltransferase [Pelosinus fermentans]) HSP 1 Score: 90.9 bits (224), Expect = 2.000e-14 Identity = 62/215 (28.84%), Postives = 98/215 (45.58%), Query Frame = 0 Query: 445 DPVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAYDIVLSNPPYIPNPERSARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERWW 660 +PVMY+G DSLGLV +P Y + + LDLC G G+Q I +++V +++NPRA+RFA FNA LN + V + P + +D +L+NPP++P+P+ + + DGG GE++ + ++ A LS EG L++V +LVNV E++ +WW Sbjct: 883 NPVMYIGMDSLGLVHTVPKYPS------------------------KNTLDLCTGSGIQAITASCYS---------------------KKVVGIDINPRAIRFARFNAQLNGISNIKFV---EGNLYAP--IANEKFDTILANPPFVPSPDNNL----DFRDGGKNGEKLLKVIIKNADLHLS-------NEGRLFIVSDLVNVHHYEEKLNQWW 1036
BLAST of NO04G01400 vs. NCBI_GenBank
Match: WP_102174631.1 (methyltransferase domain-containing protein [Fischerella thermalis] >PLZ95834.1 carbamoyltransferase [Fischerella thermalis CCMEE 5268]) HSP 1 Score: 90.5 bits (223), Expect = 2.600e-14 Identity = 64/219 (29.22%), Postives = 98/219 (44.75%), Query Frame = 0 Query: 445 DPVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAY-DIVLSNPPYIPNPERSARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERWWNDG 663 D VMYVG DS+GLV P Y A RILDLC G G+Q + ++++ +++NPRA+RFA FNA LN + L + P Y D +L+NPP++P+P + + DGG GEEI A+++++ +K +G L++V +LVN+ ++E+WW G Sbjct: 883 DVVMYVGMDSMGLVYTAPQYPA------------------------NRILDLCCGSGIQSLVASRYA---------------------KEVIGVDINPRAIRFARFNAQLNGVSNINFYLGNLYEAA-------PGYFDTILANPPFVPSPSQEC----CFRDGGMGGEEI-------LARIITESANKLTPQGRLFIVTDLVNLQEYESKLEQWWQGG 1038
BLAST of NO04G01400 vs. NCBI_GenBank
Match: WP_102180132.1 (methyltransferase domain-containing protein [Fischerella thermalis] >PMB14715.1 carbamoyltransferase [Fischerella thermalis CCMEE 5319] >PMB27491.1 carbamoyltransferase [Fischerella thermalis CCMEE 5318]) HSP 1 Score: 90.5 bits (223), Expect = 2.600e-14 Identity = 64/219 (29.22%), Postives = 98/219 (44.75%), Query Frame = 0 Query: 445 DPVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAY-DIVLSNPPYIPNPERSARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERWWNDG 663 D VMYVG DS+GLV P Y A RILDLC G G+Q + ++++ +++NPRA+RFA FNA LN + L + P Y D +L+NPP++P+P + + DGG GEEI A+++++ +K +G L++V +LVN+ ++E+WW G Sbjct: 883 DVVMYVGMDSMGLVYTAPQYPA------------------------NRILDLCCGSGIQSLVASRYA---------------------KEVIGVDINPRAIRFARFNAQLNGVSNINFYLGNLYEAA-------PGYFDTILANPPFVPSPSQEC----CFRDGGMGGEEI-------LARIITESANKLTPQGRLFIVTDLVNLQEYESKLEQWWQGG 1038
BLAST of NO04G01400 vs. NCBI_GenBank
Match: WP_102185402.1 (methyltransferase domain-containing protein [Fischerella thermalis] >PMB48357.1 carbamoyltransferase [Fischerella thermalis CCMEE 5205]) HSP 1 Score: 90.5 bits (223), Expect = 2.600e-14 Identity = 64/219 (29.22%), Postives = 98/219 (44.75%), Query Frame = 0 Query: 445 DPVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAY-DIVLSNPPYIPNPERSARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERWWNDG 663 D VMYVG DS+GLV P Y A RILDLC G G+Q + ++++ +++NPRA+RFA FNA LN + L + P Y D +L+NPP++P+P + + DGG GEEI A+++++ +K +G L++V +LVN+ ++E+WW G Sbjct: 883 DVVMYVGMDSMGLVYTAPQYPA------------------------NRILDLCCGSGIQSLVASRYA---------------------KEVIGVDINPRAIRFARFNAQLNGVSNINFYLGNLYEAA-------PGYFDTILANPPFVPSPSQEC----CFRDGGMGGEEI-------LARIITESANKLTPQGRLFIVTDLVNLQEYESKLEQWWQGG 1038
BLAST of NO04G01400 vs. NCBI_GenBank
Match: WP_007954844.1 (methyltransferase domain-containing protein [Pelosinus fermentans] >AJQ30013.1 Carbamoyltransferase [Pelosinus fermentans JBW45]) HSP 1 Score: 90.1 bits (222), Expect = 3.400e-14 Identity = 61/217 (28.11%), Postives = 99/217 (45.62%), Query Frame = 0 Query: 445 DPVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAYDIVLSNPPYIPNPERSARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERWWND 662 +PVMY+G DSLGLV +P Y + + LDLC G G+Q I +++V +++NPRA+RFA FNA LN + V + P + +D +L+NPP++P+P+ + + DGG GE++ + ++ A LS + G L++V +LVNV E++ +WW + Sbjct: 883 NPVMYIGMDSLGLVHTVPKY------------------------LSKNTLDLCTGSGIQAITASCYS---------------------KKVVGIDINPRAIRFARFNAQLNGISNIKFV---EGNLYVP--IGNEKFDTILANPPFVPSPDNNL----DFRDGGNNGEKLLEVIIKNADLHLS-------DAGSLFIVTDLVNVHQYEEKLNQWWGE 1038
BLAST of NO04G01400 vs. NCBI_GenBank
Match: WP_028583701.1 (methyltransferase domain-containing protein [Desulfobulbus mediterraneus]) HSP 1 Score: 89.0 bits (219), Expect = 7.600e-14 Identity = 67/219 (30.59%), Postives = 93/219 (42.47%), Query Frame = 0 Query: 446 PVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAYDIVLSNPPYIPNPERSARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERWWNDGLS 665 PVMY+G DS GLV A P ++LDLC G GVQ + + V ++LNPRAVRFA FNA LN + LQ D +DI+L+NPP++P+P R Y DGG TGE + ++ AA ++ G L++V +LV++D ++ RWW G S Sbjct: 883 PVMYIGLDSRGLVHAAPRRPCA------------------------KLLDLCTGSGVQALSGSRYA---------------------TEAVGVDLNPRAVRFARFNAQLNGI-HNVRFLQGDLYD----SFQHETFDIILANPPFVPSPYSELR----YRDGGCTGERVLGRIIGEAAAYMN-------PGGQLHIVSDLVDIDGYGAKLHRWWQGGPS 1040
BLAST of NO04G01400 vs. NCBI_GenBank
Match: KPQ33863.1 (carbamoyltransferase [Phormidesmis priestleyi Ana]) HSP 1 Score: 87.0 bits (214), Expect = 2.900e-13 Identity = 58/213 (27.23%), Postives = 97/213 (45.54%), Query Frame = 0 Query: 446 PVMYVGPDSLGLVGAMPSYTATAGVKEEEGGGGSDLSASSFLSVPRRILDLCAGCGVQGIXXXXXXXXXXXXXXXXXXXXXXXVSIFEQLVLLELNPRAVRFATFNAALNHLQEQTTVLQHDARTVTPADLPLPAYDIVLSNPPYIPNPERSARHLHQYGDGGTTGEEITQAVVALAAQVLSQKNSKGEEEGWLYLVGNLVNVDTLPERVERW 659 PVMY+G DS+GLV + P Y + +LDLC G G+QG+ ++ +++NPRA+RF+ FNA LN + + TVT ++ +L+NPP++P+P R + + DGG GEEI + ++ +AQ L +G +++V +LV++DT +++ W Sbjct: 889 PVMYIGMDSMGLVYSAPQYNSD------------------------HLLDLCCGSGIQGLYASRYA---------------------RSVIGVDINPRAIRFSRFNAQLNGIDNIEFRQGNLYETVTQ-----ERFNTILANPPFVPSPNRELK----FRDGGANGEEILKTIIQGSAQYL-------HPQGRVHIVTDLVDIDTYAQKLNDW 1040 The following BLAST results are available for this feature:
BLAST of NO04G01400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01400 ID=NO04G01400|Name=NO04G01400|organism=Nannochloropsis oceanica|type=gene|length=5164bpback to top protein sequence of NO04G01400.1 >NO04G01400.1-protein ID=NO04G01400.1-protein|Name=NO04G01400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=825bpback to top Synonyms
Publications
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