NO04G01360, NO04G01360 (gene) Nannochloropsis oceanica

Overview
NameNO04G01360
Unique NameNO04G01360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1424
Alignment locationchr4:423351..424774 -

Link to JBrowse

Properties
Property NameValue
DescriptionGualynate kinase-1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:423351..424774 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR008144Guanylate_kin-like
IPR008145GK/Ca_channel_bsu
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
BLAST of NO04G01360 vs. NCBI_GenBank
Match: EWM28540.1 (gualynate kinase-1 [Nannochloropsis gaditana])

HSP 1 Score: 439.9 bits (1130), Expect = 8.900e-120
Identity = 234/352 (66.48%), Postives = 267/352 (75.85%), Query Frame = 0
Query:    1 MASTASSLEDGISSSPGTGYLRESSLESQLETLSLLPHKTEEDGEERIHGASGSGSNTPPLTSTVSTASSSSTRCSSGSGIILGNSGQSKKSVLDMLHNNVVSMDNGKAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYPHLATTT 353
            MAS+ + +ED +  SP  G    +SLE QLE+ SLLPHKTEE+ EE               T+T   +   S R  +     +G SGQSKK ++DML+NN             YI+ HPE R  LQ F SAVL E+PEDVYAFAR +FSQR KVPK++LLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEV GVHYNFTS+  M  AI+EGRFLEFA VHTNLYGTSLEAVR+VQRAGKVCVLDIDVQGV+K+K+TDVNPH +F+APPSVE LEARLRGR TESA+ IETRL AARAEIEYG A+G+FEHVVVND LE AYA+LK TL+G+Y HLA  T
Sbjct:    1 MASSTALMEDRMERSPNPGSPPGNSLEGQLESFSLLPHKTEEENEETAQ------------TATPGVSDILSVRGETSENTPMGTSGQSKKGIVDMLYNN---RPKELETRPRYIDAHPEARLVLQAFFSAVLAEEPEDVYAFARQYFSQRVKVPKEELLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVEGVHYNFTSRDAMEAAIEEGRFLEFARVHTNLYGTSLEAVRQVQRAGKVCVLDIDVQGVIKVKETDVNPHYVFIAPPSVEHLEARLRGRGTESAKDIETRLGAARAEIEYGLAKGNFEHVVVNDTLEKAYADLKTTLVGFYSHLAAKT 337          
BLAST of NO04G01360 vs. NCBI_GenBank
Match: XP_005854246.1 (guanylate kinase [Nannochloropsis gaditana CCMP526] >EKU22112.1 guanylate kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 438.3 bits (1126), Expect = 2.600e-119
Identity = 233/352 (66.19%), Postives = 266/352 (75.57%), Query Frame = 0
Query:    1 MASTASSLEDGISSSPGTGYLRESSLESQLETLSLLPHKTEEDGEERIHGASGSGSNTPPLTSTVSTASSSSTRCSSGSGIILGNSGQSKKSVLDMLHNNVVSMDNGKAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYPHLATTT 353
            MAS+ + +ED +  SP  G    +SLE QLE+ SLLPHKTEE+ EE               T+T   +   S R  +     +G SGQSKK ++DML+NN             YI+ HPE R  LQ F SAVL E+PEDVYAFAR +FSQR KVPK++LLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEV GVHYNFTS+  M  AI+EGRFLEFA VHTNLYGTSLEAVR+VQRAGKVCVLDIDVQGV+K+K+TDVNPH +F+APPSVE LEARLRGR TESA+ IETRL AAR EIEYG A+G+FEHVVVND LE AYA+LK TL+G+Y HLA  T
Sbjct:    1 MASSTALMEDRMERSPNPGSPPGNSLEGQLESFSLLPHKTEEENEETAQ------------TATPGVSDILSVRGETSENTPMGTSGQSKKGIVDMLYNN---RPKELETRPRYIDAHPEARLVLQAFFSAVLAEEPEDVYAFARQYFSQRVKVPKEELLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVEGVHYNFTSRDAMEAAIEEGRFLEFARVHTNLYGTSLEAVRQVQRAGKVCVLDIDVQGVIKVKETDVNPHYVFIAPPSVEHLEARLRGRGTESAKDIETRLGAARTEIEYGLAKGNFEHVVVNDTLEKAYADLKTTLVGFYSHLAAKT 337          
BLAST of NO04G01360 vs. NCBI_GenBank
Match: XP_008891664.1 (guanylate kinase [Phytophthora parasitica INRA-310] >ETI50157.1 guanylate kinase [Phytophthora parasitica P1569] >ETK90045.1 guanylate kinase [Phytophthora parasitica] >ETL43443.1 guanylate kinase [Phytophthora parasitica] >ETL96627.1 guanylate kinase [Phytophthora parasitica] >ETM49777.1 guanylate kinase [Phytophthora parasitica] >ETN22403.1 guanylate kinase [Phytophthora parasitica INRA-310] >ETO78885.1 guanylate kinase [Phytophthora parasitica P1976] >ETP19926.1 guanylate kinase [Phytophthora parasitica CJ01A1] >ETP47855.1 guanylate kinase [Phytophthora parasitica P10297])

HSP 1 Score: 255.4 bits (651), Expect = 3.100e-64
Identity = 127/239 (53.14%), Postives = 170/239 (71.13%), Query Frame = 0
Query:  108 KAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYP 347
            K  +A Y+  HPE++  L  F+SA+LLEKP+DV AFA  HFS     P    L P+VI GPSGVGKGTL+N+L E+F   FGFSVSHTTR PR GEV GV Y+FT K+ + + I+ G FLE AEVH N+YGTS  AV+ VQ  GK+C+LDID+QGV ++K++ +    LF+APPS+E+LE RLRGRATE+ + I+ R+  A  E+EYG   G F+ ++VN  +++++ EL ATL  +YP
Sbjct:   30 KKDHAAYVEAHPEIKTLLSGFMSALLLEKPQDVVAFAAEHFS--AFKPPHTELEPIVIAGPSGVGKGTLINLLLEKFPNTFGFSVSHTTRGPREGEVDGVAYHFTEKEKVLKEIEAGLFLEHAEVHANVYGTSKRAVQDVQEKGKICILDIDIQGVQQVKKSGIRAKYLFIAPPSMEELEKRLRGRATETEDKIQLRVKNAAGELEYGQQPGVFDAILVNKVVDDSFRELVATLKQWYP 266          
BLAST of NO04G01360 vs. NCBI_GenBank
Match: KUF79184.1 (Guanylate kinase [Phytophthora nicotianae])

HSP 1 Score: 255.4 bits (651), Expect = 3.100e-64
Identity = 127/239 (53.14%), Postives = 170/239 (71.13%), Query Frame = 0
Query:  108 KAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYP 347
            K  +A Y+  HPE++  L  F+SA+LLEKP+DV AFA  HFS     P    L P+VI GPSGVGKGTL+N+L E+F   FGFSVSHTTR PR GEV GV Y+FT K+ + + I+ G FLE AEVH N+YGTS  AV+ VQ  GK+C+LDID+QGV ++K++ +    LF+APPS+E+LE RLRGRATE+ + I+ R+  A  E+EYG   G F+ ++VN  +++++ EL ATL  +YP
Sbjct:  425 KKDHAAYVEAHPEIKTLLSGFMSALLLEKPQDVVAFAAEHFS--AFKPPHTELEPIVIAGPSGVGKGTLINLLLEKFPNTFGFSVSHTTRGPREGEVDGVAYHFTEKEKVLKEIEAGLFLEHAEVHANVYGTSKRAVQDVQEKGKICILDIDIQGVQQVKKSGIRAKYLFIAPPSMEELEKRLRGRATETEDKIQLRVKNAAGELEYGQQPGVFDAILVNKVVDDSFRELVATLKQWYP 661          
BLAST of NO04G01360 vs. NCBI_GenBank
Match: GAX94009.1 (guanylate kinase [Pythium insidiosum])

HSP 1 Score: 253.1 bits (645), Expect = 1.500e-63
Identity = 124/235 (52.77%), Postives = 161/235 (68.51%), Query Frame = 0
Query:  114 YINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYPHL 349
            Y+ +HPE++  L  F+SA+L+EKP DV AFA+ HF+     P    L PLV+ GPSGVGKGTL+NML + F   FGFSVSHTTR PRPGE  GV Y+F SK+ +   ID+GRF+E+A VH N+YGTS  AV +VQ  GK+CVLDID+QGV  +K+  +    LF+APPS+E+LE RLRGR TE+ E I+ RL  A  E+ Y  A G F+  ++N  L++ Y  L  TL  +YP L
Sbjct:  385 YVESHPEIKTLLSAFMSALLIEKPSDVLAFAKEHFASH--QPNYADLEPLVVAGPSGVGKGTLINMLLQRFPDTFGFSVSHTTRGPRPGETDGVSYHFRSKEEVQREIDDGRFIEYAHVHGNIYGTSKRAVEQVQEQGKICVLDIDIQGVQLVKRAGLRCKFLFIAPPSIEELEKRLRGRGTETEEKIQLRLKNAAGELAYAAAPGAFDATLINSNLDDCYDTLLKTLQQWYPKL 617          
BLAST of NO04G01360 vs. NCBI_GenBank
Match: XP_009519367.1 (hypothetical protein PHYSODRAFT_284842 [Phytophthora sojae] >EGZ24079.1 hypothetical protein PHYSODRAFT_284842 [Phytophthora sojae])

HSP 1 Score: 249.2 bits (635), Expect = 2.200e-62
Identity = 125/239 (52.30%), Postives = 168/239 (70.29%), Query Frame = 0
Query:  108 KAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYP 347
            K  +A Y+  HPE++  L  F+SA+LLEKP+DV AFA  HFS     P    L+P+VI GPSGVGKGTL+N+L E+F   FGFSVSHTTR PR GEV GV Y+FT K  + + I+ G FLE AEVH N+YGTS  AV+ VQ  GK+C+LDID+QGV ++K++ +    LF+APPS+E+LE RLRGRATE+ + I+ R+  A  E+ YG   G F+ ++VN  +++++ EL  TL  +YP
Sbjct:   31 KKDHAAYVEAHPEIKTLLSGFMSALLLEKPQDVVAFAAEHFS--AFKPPHAELQPIVIAGPSGVGKGTLINLLLEKFPDTFGFSVSHTTRGPREGEVDGVAYHFTQKDKVLKEIESGLFLEHAEVHGNVYGTSKRAVQDVQEKGKICILDIDIQGVQQVKKSGIRAKYLFIAPPSMEELEKRLRGRATETEDKIQLRVKNAAGELAYGQQPGVFDAILVNKVVDDSFRELIDTLKQWYP 267          
BLAST of NO04G01360 vs. NCBI_GenBank
Match: OWZ16359.1 (Guanylate kinase [Phytophthora megakarya])

HSP 1 Score: 248.8 bits (634), Expect = 2.900e-62
Identity = 125/239 (52.30%), Postives = 170/239 (71.13%), Query Frame = 0
Query:  108 KAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYP 347
            K  +A Y+  HPE++  L  F+SA+LLEKP+DV AFA  HFS     P    L+P+VI GPSGVGKGTL+N+L E+F   FGFSVSHTTR PR GEV GV Y+FT K+ + + I+ G FLE A+VH N+YGTS  AV  VQ  GK+C+LDID+QGV ++K++ +    LF+APPS+E+LE RLRGRATE+ + I+ R++ A  E+ YG   G F+ V+VN  ++++++EL  TL  +YP
Sbjct:   25 KKDHAAYVEAHPEIKTLLSGFMSALLLEKPQDVVAFAVEHFS--AFQPPHAELQPIVIAGPSGVGKGTLINLLLEKFPNTFGFSVSHTTRGPREGEVDGVAYHFTEKEKVLKEIEAGLFLEHAQVHGNVYGTSKRAVLDVQEKGKICILDIDIQGVQQVKKSGIRAKYLFIAPPSMEELEKRLRGRATETEDKIQLRVNNAAGELAYGQQPGVFDAVLVNKVVDDSFSELVDTLKQWYP 261          
BLAST of NO04G01360 vs. NCBI_GenBank
Match: XP_002901803.1 (guanylate kinase [Phytophthora infestans T30-4] >EEY57193.1 guanylate kinase [Phytophthora infestans T30-4])

HSP 1 Score: 248.4 bits (633), Expect = 3.800e-62
Identity = 124/239 (51.88%), Postives = 168/239 (70.29%), Query Frame = 0
Query:  108 KAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYP 347
            K  +  Y++ HPE++  L  F+SA+LLEKP+DV AFA  HFS     P    L P+VI GPSGVGKGTL+N+L E+F   FGFSVSHTTR PR GEV GV Y+FT+K  + + I+ G FLE AEVH N+YGTS  AV+ VQ  GK+C+LDID+QGV ++K++ +    LF+APPS+E+LE RLRGRATE+ + I+ R+  A  E+ YG   G F+ ++VN  +++++ EL  TL  +YP
Sbjct:   29 KKEHTAYVDEHPEIKTLLSGFMSALLLEKPQDVVAFAAEHFS--AFKPPHTELEPIVIAGPSGVGKGTLINLLLEKFPNTFGFSVSHTTRGPREGEVDGVAYHFTAKDKVLKEIEAGLFLEHAEVHGNVYGTSKRAVQDVQEKGKICILDIDIQGVQQVKKSGIPAKYLFIAPPSMEELEKRLRGRATETEDKIQLRVKNAAGELAYGQQPGVFDAILVNQVVDDSFRELVETLKQWYP 265          
BLAST of NO04G01360 vs. NCBI_GenBank
Match: POM68131.1 (Guanylate Kinase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 248.4 bits (633), Expect = 3.800e-62
Identity = 125/239 (52.30%), Postives = 168/239 (70.29%), Query Frame = 0
Query:  108 KAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYP 347
            K  +A Y+  HPE++  L  F+SA+LLEKP+DV AFA  HFS     P    L+P+VI GPSGVGKGTL+N+L E+F   FGFSVSHTTR PR GEV GV Y+FT K+ + + I+ G FLE A+VH N+YGTS  AV  VQ  GK+C+LDID+QGV ++K++ +    LF+APPS+E+LE RLRGRATE+ + I+ R+  A  E+ YG   G F+ V+VN  +++++ EL  TL  +YP
Sbjct:   26 KKDHAAYVEAHPEIKTLLSGFMSALLLEKPQDVVAFAAEHFS--AFKPAHAELQPIVIAGPSGVGKGTLINLLLEKFPNTFGFSVSHTTRGPREGEVDGVAYHFTEKEKVLKEIEAGLFLEHAQVHGNVYGTSKRAVLDVQEKGKICILDIDIQGVQQVKKSGIRAKYLFIAPPSMEELEKRLRGRATETEDKIQLRVKNAAGELAYGQQPGVFDAVLVNKVVDDSFQELVDTLKQWYP 262          
BLAST of NO04G01360 vs. NCBI_GenBank
Match: CBN78399.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 238.0 bits (606), Expect = 5.100e-59
Identity = 124/251 (49.40%), Postives = 163/251 (64.94%), Query Frame = 0
Query:   98 HNNVVSMDNGKAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQRGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPRPGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRAGKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEAIETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYPHL 349
            H N +     +A    Y+  HPEV + L DFL AV+ +KPEDV+ FAR HF+  G    D     +V+ GPSGVGKGT++  L E F   FGF  SHTTR  R GE  GVHY+FTS   M EA+  G F+E AEVH NLYGTS+ AV  V + G+VC+LDID+QGV  +K + + P  +F+APPS+E LE RLR R TES E++ TRL  AR E++YGT +G+F+ VV ND+L+ A   L + L  ++P +
Sbjct:    6 HQNTI-----RADQEAYLQEHPEVASLLNDFLRAVVEQKPEDVFEFARQHFAGAGVDRVD----AVVVAGPSGVGKGTIIRKLMELFPQQFGFGCSHTTRGRREGEQEGVHYHFTSLDAMREAVARGEFIEHAEVHGNLYGTSVAAVGDVTKKGQVCLLDIDIQGVKTVKASPLRPKYVFIAPPSMEVLENRLRDRGTESEESLSTRLHNAREEVDYGTTQGNFDLVVENDDLDQAVRNLSSRLTEWFPKI 247          
The following BLAST results are available for this feature:
BLAST of NO04G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28540.18.900e-12066.48gualynate kinase-1 [Nannochloropsis gaditana][more]
XP_005854246.12.600e-11966.19guanylate kinase [Nannochloropsis gaditana CCMP526... [more]
XP_008891664.13.100e-6453.14guanylate kinase [Phytophthora parasitica INRA-310... [more]
KUF79184.13.100e-6453.14Guanylate kinase [Phytophthora nicotianae][more]
GAX94009.11.500e-6352.77guanylate kinase [Pythium insidiosum][more]
XP_009519367.12.200e-6252.30hypothetical protein PHYSODRAFT_284842 [Phytophtho... [more]
OWZ16359.12.900e-6252.30Guanylate kinase [Phytophthora megakarya][more]
XP_002901803.13.800e-6251.88guanylate kinase [Phytophthora infestans T30-4] >E... [more]
POM68131.13.800e-6252.30Guanylate Kinase [Phytophthora palmivora var. palm... [more]
CBN78399.15.100e-5949.40conserved unknown protein [Ectocarpus siliculosus][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009678NSK009678Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01360.1NO04G01360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578419gene_1921Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100009g18gene2046Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01360.1NO04G01360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01360 ID=NO04G01360|Name=NO04G01360|organism=Nannochloropsis oceanica|type=gene|length=1424bp
ATGGCGTCCACCGCTTCCTCTTTAGAGGACGGGATAAGCAGCAGCCCCGG
CACGGGTTATCTTCGTGAAAGCAGCTTGGAGTCTCAGCTGGAAACCCTGA
GCTTGTTGCCTCACAAGACGGAGGAGGATGGCGAGGAGCGCATCCATGGT
GCTAGCGGCAGCGGGAGCAACACCCCACCGCTCACCAGCACTGTCTCCAC
CGCCAGCAGCTCAAGTACCAGGTGCAGCAGTGGCAGCGGCATCATCTTGG
GCAATAGTGGTCAGTCGAAGAAAAGCGTGTTGGACATGCTGCACAACAAC
GTCGTGAGCATGGACAATGGCAAAGCTGCGAATGCCCACTACATCAACAC
CCACCCAGAAGTTCGCGCTGCCTTGCAAGATTTCTTGAGTGCCGTCTTGC
TTGAAAAGCCTGAAGATGTGTATGCGTTCGCTCGCATTCATTTCAGCCAA
CGTGGTAAAGTTCCCAAGGACAAGCTTTTGCGGCCCTTGGTCATCTGTGG
GCCGTCTGGGGTGGGGAAGGGGACGTTAATGAACATGCTTTTTGAGGAGT
TTGGAGGGTATTTTGGCTTCTCTGTCTCGCACACTACTCGGGCCCCGCGT
CCTGGGGAGGTGCATGGCGTACATTATAATTTTACTTCGAAAAAGGTGAT
GGCGGAGGCGATAGACGAAGGACGGTTCCTGGAGTTTGCTGAGGTCCACA
CTAATTTGTACGGGACAAGTTTGGAGGCTGTGCGGAAAGTACAACGCGCG
GGGAAGGTATGCGTGTTGGATATTGACGTGCAGGGGGTGATGAAAATCAA
GCAGACGGACGTCAACCCCCATCTACTCTTCGTAGCCCCCCCGTCGGTGG
AGCAGCTGGAGGCCAGGTTGAGGGGGCGCGCGACGGAGTCGGCCGAGGCC
ATCGAGACGAGGCTCTCGGCGGCACGGGCGGAAATCGAATATGGCACGGC
AGAAGGGCACTTTGAGCACGTGGTGGTGAATGATGAGTTGGAAAACGCGT
ACGCGGAGTTGAAGGCGACGTTGATTGGGTATTACCCGCATCTGGCGACC
ACAACGgtctgaggaggaagagggagagagggagagaagaaagaggtaga
gaggtagagagacagagaatagcgacaggaaacagacagaagataagaag
ataaactatttagatcctgattgaacgacgagtggtaagagaggatacac
agacacccacacgcccacacacacacacacagTGTTGTTATGGTCCGACG
CAATTGACAGGACAGAGAGAGGGCAAAAAAAGAGCGCGGGACCTTAAAAT
TAGACACAGAATGAATAAGACCTTCACCGTCGGCAACAGCAACAACAGCA
GCAACAACAGCAGCAGCAGAATCATCAAATTTTCAGGTAAAATTTTCACG
GCTCCACCCACCCCCACAAAGTAG
back to top

protein sequence of NO04G01360.1

>NO04G01360.1-protein ID=NO04G01360.1-protein|Name=NO04G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=416bp
MASTASSLEDGISSSPGTGYLRESSLESQLETLSLLPHKTEEDGEERIHG
ASGSGSNTPPLTSTVSTASSSSTRCSSGSGIILGNSGQSKKSVLDMLHNN
VVSMDNGKAANAHYINTHPEVRAALQDFLSAVLLEKPEDVYAFARIHFSQ
RGKVPKDKLLRPLVICGPSGVGKGTLMNMLFEEFGGYFGFSVSHTTRAPR
PGEVHGVHYNFTSKKVMAEAIDEGRFLEFAEVHTNLYGTSLEAVRKVQRA
GKVCVLDIDVQGVMKIKQTDVNPHLLFVAPPSVEQLEARLRGRATESAEA
IETRLSAARAEIEYGTAEGHFEHVVVNDELENAYAELKATLIGYYPHLAT
TTCCYGPTQLTGQREGKKRARDLKIRHRMNKTFTVGNSNNSSNNSSSRII
KFSGKIFTAPPTPTK*
back to top
Synonyms
Publications