NO04G01340, NO04G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01340 vs. NCBI_GenBank
Match: CCA19202.1 (phosphoinositol transporter putative [Albugo laibachii Nc14]) HSP 1 Score: 154.1 bits (388), Expect = 1.800e-33 Identity = 72/215 (33.49%), Postives = 120/215 (55.81%), Query Frame = 0 Query: 512 VPLRYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPD----------PDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGG 717 +P +L+ NV KA E+++ATL+WR D ILE PH +Y+ IK ++ Q++ R + G+P+Y+E A I+ + L V +D++ +HY++ EF D +++ V+D G+ M MS +EF+ + ++Q HYP R+ IL++N P +F +WK VKG +E T + S + +AL + I+ + +PVEYGG Sbjct: 706 IPASFLIAESENVSKAMERYQATLQWRVEMNVDKILETPHPKYYLIKSFYKQYIHKRDKLGHPIYFEKLATINMKALQKAAVSLDDLFYHYLFNIEFTVKYVASDTCACQACCASKTRKLLIVLDARGIGMKDMSGEFLEFVRKGAGMMQRHYPQRSYKILIINVPSWFGMVWKGVKGLLNEATRQKTNILSETEAPTALLQLIDKENLPVEYGG 920
BLAST of NO04G01340 vs. NCBI_GenBank
Match: CBJ33167.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 152.5 bits (384), Expect = 5.400e-33 Identity = 76/224 (33.93%), Postives = 124/224 (55.36%), Query Frame = 0 Query: 512 VPLRYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGGNLRYAPLEGTQEWAKHQEM 736 +P+RY+ +V +A+ +W ATLKWR + D IL+ + IKKY+P F +++G+ VYYE+ KID L G+D+D + HYV+I EF++ +P+G++ T +D+ G +S + EF+ RS ++ AHYP R+ I ++NAP++FS +WK V T + V + E I+ + +P + GG PL+G QE H+ + Sbjct: 65 IPIRYVKGMEGDVVEARRRWIATLKWREEEKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSVVYYEIPGKIDLNKLRENGLDMDSLCRHYVYITEFLWKELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSYKIFILNAPWWFSVVWKFVTPFVHPNTRAKV-VVCGGNFLEKMGELIDLENVPQDVGGQDPTPPLQGPQELQMHEHV 287
BLAST of NO04G01340 vs. NCBI_GenBank
Match: OWZ14787.1 (SEC14 cytosolic factor [Phytophthora megakarya]) HSP 1 Score: 151.0 bits (380), Expect = 1.600e-32 Identity = 72/220 (32.73%), Postives = 121/220 (55.00%), Query Frame = 0 Query: 497 SMDVIAVLAALGRPAVPLRYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGG 717 S + + A G A R++ + +K ++ ATL+WR D IL PH + IK+Y+PQ+ GR+R G PVYYE KI L +G+ +D+++ HY++I E+++ P+ G+ ITV+D++G+ M + ++FI R+ AHYP R+ I ++N P +F+ IW++VK D T + + + L I+P+ IP ++GG Sbjct: 466 SSETTEIQAISGPIAFSPRFIAGEKGDAEKGHARFLATLEWRKENDIDNILVTPHPNFETIKQYYPQYFHGRTREGQPVYYERPGKIQLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDPENIPSDFGG 685
BLAST of NO04G01340 vs. NCBI_GenBank
Match: XP_008860831.1 (hypothetical protein H310_00028 [Aphanomyces invadans] >ETW09420.1 hypothetical protein H310_00028 [Aphanomyces invadans]) HSP 1 Score: 150.6 bits (379), Expect = 2.000e-32 Identity = 63/203 (31.03%), Postives = 119/203 (58.62%), Query Frame = 0 Query: 515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGGN 718 R++ NV+K + ++E+TL+WR D +L+ P +H IKKY+PQ+ G+S G+ VYYE KID + + + G+ +D+++ HYV++ E++++ P G+ +TV+D++G+ ++ + F+ ++ + A+YP R+ I +VN P +F+ +W +V D T +++ L + I DQ+P +YGG+ Sbjct: 477 RFIAAEKGNVEKGRARYESTLQWRRENNVDGMLQEPQPHFHLIKKYYPQYFHGKSIKGHCVYYEKVGKIDLKAMKAAGLTIDQLLRHYVYLTEYMWTILEPSDSGRSVTVLDVNGIGFYDLAGDVLLFVRQATGFVSANYPERSAQIFIVNVPTWFNMVWSVVSPMIDPVTKEKIRICKGRAVKEELLKSIAEDQLPADYGGS 679
BLAST of NO04G01340 vs. NCBI_GenBank
Match: POM78364.1 (SEC14 cytosolic factor [Phytophthora palmivora var. palmivora]) HSP 1 Score: 150.2 bits (378), Expect = 2.700e-32 Identity = 71/213 (33.33%), Postives = 118/213 (55.40%), Query Frame = 0 Query: 505 AALGRPAVPLRYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGGN 718 A G A R++ +V+K ++ TL+WR D IL PH + IKKY+PQ+ GR+R G PVYYE KID L +G+ +D+++ HY+++ E+++ P G+ ITV+D++G+ M + ++FI R+ AHYP R+ I ++N P +F+ IW++VK D T + + + L I+ + IP ++GG+ Sbjct: 471 AISGPIAFSPRFIAGEKGDVEKGHARYLVTLEWRKENDIDNILVTPHPNFDIIKKYYPQYFHGRTRDGQPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVVEPSDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDSENIPSDFGGD 683
BLAST of NO04G01340 vs. NCBI_GenBank
Match: ETI36009.1 (hypothetical protein F443_17767 [Phytophthora parasitica P1569] >ETM36130.1 hypothetical protein L914_17095 [Phytophthora parasitica] >ETP05829.1 hypothetical protein F441_17645 [Phytophthora parasitica CJ01A1] >ETP33936.1 hypothetical protein F442_17622 [Phytophthora parasitica P10297]) HSP 1 Score: 149.4 bits (376), Expect = 4.500e-32 Identity = 69/202 (34.16%), Postives = 116/202 (57.43%), Query Frame = 0 Query: 515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGG 717 R++ + +K + ++ ATL+WR D IL PH + IKKY+PQ+ GR+R G PVYYE KID L +G+ +D+++ HY++I E+++ P+ G+ ITV+D++G+ M + ++FI R+ AHYP R+ I ++N P +F+ IW++VK D T + + + L I+ + IP ++GG Sbjct: 480 RFIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGG 681
BLAST of NO04G01340 vs. NCBI_GenBank
Match: ETI36011.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETM36132.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETP05831.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP33938.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 149.4 bits (376), Expect = 4.500e-32 Identity = 69/202 (34.16%), Postives = 116/202 (57.43%), Query Frame = 0 Query: 515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGG 717 R++ + +K + ++ ATL+WR D IL PH + IKKY+PQ+ GR+R G PVYYE KID L +G+ +D+++ HY++I E+++ P+ G+ ITV+D++G+ M + ++FI R+ AHYP R+ I ++N P +F+ IW++VK D T + + + L I+ + IP ++GG Sbjct: 369 RFIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGG 570
BLAST of NO04G01340 vs. NCBI_GenBank
Match: ETK76235.1 (hypothetical protein L915_17298 [Phytophthora parasitica] >ETL29676.1 hypothetical protein L916_17191 [Phytophthora parasitica] >ETO64742.1 hypothetical protein F444_17805 [Phytophthora parasitica P1976]) HSP 1 Score: 149.4 bits (376), Expect = 4.500e-32 Identity = 69/202 (34.16%), Postives = 116/202 (57.43%), Query Frame = 0 Query: 515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGG 717 R++ + +K + ++ ATL+WR D IL PH + IKKY+PQ+ GR+R G PVYYE KID L +G+ +D+++ HY++I E+++ P+ G+ ITV+D++G+ M + ++FI R+ AHYP R+ I ++N P +F+ IW++VK D T + + + L I+ + IP ++GG Sbjct: 480 RFIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGG 681
BLAST of NO04G01340 vs. NCBI_GenBank
Match: ETK76237.1 (hypothetical protein, variant 2 [Phytophthora parasitica] >ETL29678.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETO64744.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976]) HSP 1 Score: 149.4 bits (376), Expect = 4.500e-32 Identity = 69/202 (34.16%), Postives = 116/202 (57.43%), Query Frame = 0 Query: 515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGG 717 R++ + +K + ++ ATL+WR D IL PH + IKKY+PQ+ GR+R G PVYYE KID L +G+ +D+++ HY++I E+++ P+ G+ ITV+D++G+ M + ++FI R+ AHYP R+ I ++N P +F+ IW++VK D T + + + L I+ + IP ++GG Sbjct: 369 RFIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGG 570
BLAST of NO04G01340 vs. NCBI_GenBank
Match: ETL82896.1 (hypothetical protein L917_17026 [Phytophthora parasitica]) HSP 1 Score: 149.4 bits (376), Expect = 4.500e-32 Identity = 69/202 (34.16%), Postives = 116/202 (57.43%), Query Frame = 0 Query: 515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGG 717 R++ + +K + ++ ATL+WR D IL PH + IKKY+PQ+ GR+R G PVYYE KID L +G+ +D+++ HY++I E+++ P+ G+ ITV+D++G+ M + ++FI R+ AHYP R+ I ++N P +F+ IW++VK D T + + + L I+ + IP ++GG Sbjct: 480 RFIAGEKGDEEKGRARYLATLEWRKENNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGG 681 The following BLAST results are available for this feature:
BLAST of NO04G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01340 ID=NO04G01340|Name=NO04G01340|organism=Nannochloropsis oceanica|type=gene|length=2974bpback to top protein sequence of NO04G01340.1 >NO04G01340.1-protein ID=NO04G01340.1-protein|Name=NO04G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=787bpback to top Synonyms
Publications
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