NO04G01240, NO04G01240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO04G01240 vs. NCBI_GenBank
Match: PNH01468.1 (hypothetical protein TSOC_012642, partial [Tetrabaena socialis]) HSP 1 Score: 89.0 bits (219), Expect = 4.000e-14 Identity = 60/179 (33.52%), Postives = 88/179 (49.16%), Query Frame = 0 Query: 136 RIVAIDPGRVNLVTALD--SQTGKIKTLTCRAYYEKGRINECKRKFNSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHY---HRLWDARCEKKRARAHMAVYAGKQKVLDVFF----AGLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 306 RIV IDPGR N++ A++ S K+ LT YY++ + K++ SW + D A S + K DL A+ + H W+ + + A+ + +Y GK++VL FF G G +IAYGA F GKGE+SVP V + C+ + T V E TTK+H Sbjct: 663 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 838
BLAST of NO04G01240 vs. NCBI_GenBank
Match: PNH08370.1 (hypothetical protein TSOC_005131 [Tetrabaena socialis]) HSP 1 Score: 89.0 bits (219), Expect = 4.000e-14 Identity = 60/179 (33.52%), Postives = 88/179 (49.16%), Query Frame = 0 Query: 136 RIVAIDPGRVNLVTALD--SQTGKIKTLTCRAYYEKGRINECKRKFNSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHY---HRLWDARCEKKRARAHMAVYAGKQKVLDVFF----AGLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 306 RIV IDPGR N++ A++ S K+ LT YY++ + K++ SW + D A S + K DL A+ + H W+ + + A+ + +Y GK++VL FF G G +IAYGA F GKGE+SVP V + C+ + T V E TTK+H Sbjct: 377 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 552
BLAST of NO04G01240 vs. NCBI_GenBank
Match: PNH08357.1 (hypothetical protein TSOC_005129 [Tetrabaena socialis]) HSP 1 Score: 89.0 bits (219), Expect = 4.000e-14 Identity = 60/179 (33.52%), Postives = 88/179 (49.16%), Query Frame = 0 Query: 136 RIVAIDPGRVNLVTALD--SQTGKIKTLTCRAYYEKGRINECKRKFNSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHY---HRLWDARCEKKRARAHMAVYAGKQKVLDVFF----AGLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 306 RIV IDPGR N++ A++ S K+ LT YY++ + K++ SW + D A S + K DL A+ + H W+ + + A+ + +Y GK++VL FF G G +IAYGA F GKGE+SVP V + C+ + T V E TTK+H Sbjct: 324 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 499
BLAST of NO04G01240 vs. NCBI_GenBank
Match: PNH08379.1 (hypothetical protein TSOC_005114 [Tetrabaena socialis]) HSP 1 Score: 89.0 bits (219), Expect = 4.000e-14 Identity = 60/179 (33.52%), Postives = 88/179 (49.16%), Query Frame = 0 Query: 136 RIVAIDPGRVNLVTALD--SQTGKIKTLTCRAYYEKGRINECKRKFNSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHY---HRLWDARCEKKRARAHMAVYAGKQKVLDVFF----AGLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVH 306 RIV IDPGR N++ A++ S K+ LT YY++ + K++ SW + D A S + K DL A+ + H W+ + + A+ + +Y GK++VL FF G G +IAYGA F GKGE+SVP V + C+ + T V E TTK+H Sbjct: 93 RIVVIDPGRTNIIYAVEVTSSGVKVYRLTRAQYYQESGVARGKQQATSWLRGVKDELAQLSTVSPKGA--DL-PAFLLFVATHLATSEARWEEAMKPRWAQMRLRLYGGKKRVLSRFFNEIARGQGGADSRPVVIAYGAAKFAPGGKGELSVPTSGVFKACQERFPTYLVDEFRTTKIH 268
BLAST of NO04G01240 vs. NCBI_GenBank
Match: PNH00238.1 (hypothetical protein TSOC_013956 [Tetrabaena socialis]) HSP 1 Score: 84.7 bits (208), Expect = 7.600e-13 Identity = 69/255 (27.06%), Postives = 103/255 (40.39%), Query Frame = 0 Query: 78 FHNRVSTDGVSVSVFFHVAKERLKRXXXXXXXXXXXXXXXXXXXXXQGQENLQPVRERRIVAIDPGRVNLVTALD---SQTGKIKTLTCRAYYEKGRINECKRKFNSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHYHRLWDARCEKKRARAHMAVYAGKQKVLDVFFA----GLTGPGQAKPIIAYGAGIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKVHLDCGQRLNPIARRTEGEGGE 326 F + TDGVSV + H + + K E L R+V IDPGR N+V A++ KI LT YY++ + + ++ W + + A S + K L A+ + W + + A+ + +Y GK++V+ FF+ G G +I YGA F GKGE+SVP V + C + T V E TTK+H L + R GGE Sbjct: 299 FTGTIETDGVSVCI--HYMRPKRKEAEEEADDGGNEEAPKAKSKQRPTPEQLS---GSRVVVIDPGRTNIVYAVEVPPEAPPKIYRLTRSQYYQESGVVQGSQRAARWLRGVKEELAQLSTASPKGASLPLFQAFIATYLETCEVRWTEALKTRWAQQSLRLYGGKKRVVAKFFSEIARGDAGAPARPVVIGYGAAKFAPGGKGELSVPTSGVFKACRERFPTYLVDEFRTTKIHHADDSLLQGVGER-RWRGGE 547
BLAST of NO04G01240 vs. NCBI_GenBank
Match: PNH02916.1 (hypothetical protein TSOC_011071 [Tetrabaena socialis]) HSP 1 Score: 84.3 bits (207), Expect = 9.900e-13 Identity = 87/307 (28.34%), Postives = 123/307 (40.07%), Query Frame = 0 Query: 129 LQPVRER----RIVAIDPGRVNLVTALDSQTG--KIKTLTCRAYYEKGRINECKRKFNSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHYH---RLWDARCEKKRARAHMAVYAGKQKVLDVFFAGLT--GPG-QAKP-IIAYGAGIFPHTGKGEVSVPVKRVLRVCERYYRTVYVPEHLTTKV-HLDCGQRLNPIARRTEGEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIRGLYWC----NTCEQFVSRDGNGARNILRVYRRMVRGEARP 418 L+P E+ RIV IDPGR N++ A++ KI LT YY++ + K++ +W + S + K DL+ A+ + H W+ + + A+ H+ +Y GK++VL FF + PG A+P II YGA F GKGE+SVP V + C + T V E +TKV H D RR +G+ +RGL WC T +FV+RD NGA NI RR E RP Sbjct: 356 LRPTPEQLSRCRIVVIDPGRTNIIYAVEVTPDGVKIYRLTRAQYYQESGVERGKQQAANWLRGTKEELTKLSAASPKGA--DLQ-AFLVFVTTHLETSDARWEEALKPRWAQMHLRLYGGKKRVLAKFFDEIARGDPGAPARPVIIGYGAAKFAPGGKGELSVPTCGVFKACRARFPTHLVDEFRSTKVYHADDSILQGVAERRWKGD-----------------------------------------------------RMKTVRGLLWCGSTNETKSKFVNRDFNGAMNI----RRCFLSEERP 602
BLAST of NO04G01240 vs. NCBI_GenBank
Match: KXZ41250.1 (hypothetical protein GPECTOR_607g688 [Gonium pectorale]) HSP 1 Score: 80.5 bits (197), Expect = 1.400e-11 Identity = 57/197 (28.93%), Postives = 94/197 (47.72%), Query Frame = 0 Query: 136 RIVAIDPGRVNL---VTALDSQTGKIKTLTCRAYYEKGRINECKRKFNSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHYHRLWDARCEKKRARAHMAVYAGKQKVLDVFFAGLTGPGQAK-----PIIAYGAGIFPHTGKGEVSVPVKRVLRV-CERYYRTVY-VPEHLTTKVHLDCGQRLNPIARRTEGE 323 R++A++ GR N+ V LD ++ LT YY + I R+ W + A S + K + + + + +LW + + A+ + ++ GK++ L +F GL G+A+ +IAYGA F GKGE+SVP R+ R R+ R VY V E TT+VH + L + +R +G+ Sbjct: 268 RVLAVNLGRTNIAYVVELLDDGRLRVYRLTRAGYYRESGILGAARRAQHWLKGVRRATQALSLVSSKGAGLEAFLVFVRVHLETSGQLWAEMLKHRWAQERLRLHGGKKRALALFLEGLVWAGEARGDRRPVLIAYGAAGFASGGKGELSVPTTRMYRAFTHRFLRLVYLVDEFRTTRVHHEDDSVLESVHKRKKGK 464
BLAST of NO04G01240 vs. NCBI_GenBank
Match: AAL56217.1 (unknown [White spot syndrome virus]) HSP 1 Score: 73.2 bits (178), Expect = 2.300e-9 Identity = 92/294 (31.29%), Postives = 138/294 (46.94%), Query Frame = 0 Query: 60 KEMWDETFQVGNLRNQRV---FHNRVSTDGVSVSVFFHVAKERLKRXXXXXXXXXXXXXXXXXXXXXQGQENLQPVRERRIVAIDPGRVNLV--TALDSQTGKI---KTLTCRAYYEKG------RINECKRK--------------FNSWEDALGDINAAFSRTTMKSCCPDLRSAYRELIVRHYHRLWDARCEKKRARAHMAVYAGKQKVLDVFFAGLTGPGQAK---PIIAYGAGIFPHTGKGEVSVPVKRVL--RVCERY---YRTVYVPEHLTTKVHLDCGQRLNPIAR 318 K+ W F V ++ R FH+ + TDG VSV F R XXXXXXXXXXXXXXXX + + N P + +V +DPGR N+V + D++ ++ +T + YY++ + NE +K +++ E+ + D N S T K AY +++ HY LW+ + +KK + M VY+ KQK + F L P + K IA+G F TG+GE R+ ++ ER R +V E T+KV C Q LN + + Sbjct: 177 KQGWYLLFDVKKIKKLRPNWNFHS-IQTDGEGVSVLF-------SREVEXXXXXXXXXXXXXXXXGDEDRRNYPPTNAKYVVGVDPGRTNVVSCSVFDTRQKRVVRKHRMTAKQYYQESWMTDRRKANETYKKNNKEYKEALEEITRYDNGEEIINDGNGDTSTPTKKF------EAYLKVVNEHYRLLWNEKGKKKYRKNAMKVYSRKQKCISNFIDELI-PKRDKIEDYHIAFGDAKFACTGRGEQYASPARIFAKKIKERVGGDKRFTFVDEKYTSKVCHRCNQPLNMLEK 455 The following BLAST results are available for this feature:
BLAST of NO04G01240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8 Position : 0 Zoom : x 1
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01240 ID=NO04G01240|Name=NO04G01240|organism=Nannochloropsis oceanica|type=gene|length=1595bpback to top protein sequence of NO04G01240.1 >NO04G01240.1-protein ID=NO04G01240.1-protein|Name=NO04G01240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bpback to top Synonyms
Publications
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