NO04G01190, NO04G01190 (gene) Nannochloropsis oceanica

Overview
NameNO04G01190
Unique NameNO04G01190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1074
Alignment locationchr4:375463..376536 +

Link to JBrowse

Properties
Property NameValue
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:375463..376536 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR030230Gpn1/Npa3/XAB1
IPR004130Gpn
IPR003593AAA+_ATPase
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Homology
BLAST of NO04G01190 vs. NCBI_GenBank
Match: EWM28521.1 (xpa-binding protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 483.4 bits (1243), Expect = 6.000e-133
Identity = 245/290 (84.48%), Postives = 267/290 (92.07%), Query Frame = 0
Query:   31 FRKKPIVLLFMGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGLDRQGDDMGYSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMKNREMERLMKDLKV 321
            FRKKPIVLLFMGMAGSGKTTLVQRLNL LN+ GTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVM QYELGPNGAIMTSLNLFATRFDQVL+ILEKRAP+LEYVLVDTPGQIEVFTWSASGAIITEALA+SFPT+L+Y+VDTPRT+SPTTFMSNMLYACSILYKTRLPIVLTFNK DILSH FA +WM DFEKFQEGLDRQG+DMGY STLIRSMSLVLDEFYKTLR VGVSAASG+G+  FF AVDEAA EF R+YLPD++ RK +   E++  + +EM RLMKDL++
Sbjct:   59 FRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRM 348          
BLAST of NO04G01190 vs. NCBI_GenBank
Match: CBN74574.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 375.6 bits (963), Expect = 1.800e-100
Identity = 195/288 (67.71%), Postives = 229/288 (79.51%), Query Frame = 0
Query:   41 MGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGLDRQGDDMGYSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMK--------NREMERLMKDLKV 321
            MGMAGSGKTTL+QRLNL+    G KSY++NLDPAVK VPF A+IDIRDTVNYKEVM+QY LGPNGAI TSLNLFATRFDQVL +LEKR+ +LEYV +DTPGQIEVFTWSASG IITE LA++FPT L+Y+VDTPRTA+PTTFMSNMLYACS+LYK+RLP+VL  NK DILS  FA EWM DFEK QE LD  GD+  Y ++L RS++LVLDEFY  L  VGVSAASG+G+   F+A+D AA EFER+YLPDL  R ++ +  QE  K         R ME+LM D+ +
Sbjct:   58 MGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDE-SYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIKEAKARQEAAKQASLPHPPKRSMEKLMTDIAI 344          
BLAST of NO04G01190 vs. NCBI_GenBank
Match: XP_021869538.1 (aerobic respiration-related protein [Kockovaella imperatae] >ORX35348.1 aerobic respiration-related protein [Kockovaella imperatae])

HSP 1 Score: 373.6 bits (958), Expect = 6.700e-100
Identity = 188/307 (61.24%), Postives = 239/307 (77.85%), Query Frame = 0
Query:   16 SVSVPGNDTASTLPAFRKKPIVLLFMGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGLDRQGDD----MGYSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMKNREMERLMKDL 319
            S S   N + ST  A  K P+V+L +GMAGSGKTTL+QRLN HL++  T  Y +NLDPAV  +P++ANIDIRDTV+YKEVM QY LGPNG I+T+LNLF T+FDQVL  +EKRA  ++YVLVDTPGQIE+FTWSASG+IIT+A+A+S PT++ YI+DTPRT +P TFMSNMLYACSILYKTRLP +L FNKID+  H FA EWM DF+ +Q  LD +G D    M Y+S+L+ SMSLVLDEFY  LR VGVSA +GEG+ DFF AV+EA +E+E +Y P+L    E+R+ + EE K  ++E++M+D+
Sbjct:   21 SASSSQNASTSTDQA-EKTPVVILCIGMAGSGKTTLMQRLNSHLHSRNTPPYILNLDPAVSHMPYSANIDIRDTVDYKEVMKQYNLGPNGGILTALNLFTTKFDQVLAFVEKRAASVDYVLVDTPGQIEIFTWSASGSIITDAIASSLPTVVAYIIDTPRTTAPATFMSNMLYACSILYKTRLPFILVFNKIDVEPHDFAIEWMHDFQAYQAALDEKGRDEQGEMAYTSSLMSSMSLVLDEFYNNLRAVGVSAMTGEGMKDFFSAVEEAKKEYETDYKPELARLAEERKAKAEEEKKNQLEKVMRDM 326          
BLAST of NO04G01190 vs. NCBI_GenBank
Match: ORZ17650.1 (hypothetical protein BCR42DRAFT_325798 [Absidia repens])

HSP 1 Score: 368.6 bits (945), Expect = 2.200e-98
Identity = 183/303 (60.40%), Postives = 237/303 (78.22%), Query Frame = 0
Query:   18 SVPGNDTASTLPAFRKKPIVLLFMGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGLDRQGDDMGYSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMKNREMERLMKDLKV 321
            + P  +++ST    +K+P  +L +GMAGSGKTT +QR+N HL++  T  Y +NLDPAV ++PF ANIDIRDTVNYKEVM QY LGPNG I+TSLNLF T+FDQVL  +EKRA  + ++LVDTPGQIE+FTWSASGAIIT+ LA ++PT++ YI+DTPRT SP TFMSNMLYACSILYKT+LP +L FNK D++SH FA EWM DFEKFQ+ L R   D  Y S+L+ SMSLVLDEFY+ L+ VGVSA +G+G+ +FF AVDEAA E+E+EY P++      + G++E+ +  ++ RLMKD++V
Sbjct:    4 TTPTPESSST----KKQPPTILCIGMAGSGKTTFMQRINAHLHSKKTPPYVLNLDPAVGNLPFTANIDIRDTVNYKEVMKQYNLGPNGGILTSLNLFTTKFDQVLNFVEKRADSVSHILVDTPGQIEIFTWSASGAIITDTLAATYPTVIAYIIDTPRTTSPATFMSNMLYACSILYKTKLPFILVFNKTDVVSHDFAVEWMTDFEKFQDALRR---DTSYMSSLMNSMSLVLDEFYQHLKVVGVSAVTGQGIDEFFTAVDEAADEYEKEYKPEIERMIRIKVGKEEKERQEQLNRLMKDVEV 299          
BLAST of NO04G01190 vs. NCBI_GenBank
Match: ODO03009.1 (hypothetical protein I350_05853 [Cryptococcus amylolentus CBS 6273])

HSP 1 Score: 365.5 bits (937), Expect = 1.800e-97
Identity = 185/301 (61.46%), Postives = 233/301 (77.41%), Query Frame = 0
Query:   24 TASTLPAFRKKPIVLLFMGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGL-DRQGDDMG---YSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMKNREMERLMKDLKV 321
            TA    +F KKP+V+L +GMAGSGKTT +QRLN HL++  T  Y +NLDPAV  +P+ ANIDIRDTV+YKEVM QY LGPNG I+T+LNLF T+FDQVL  +EKRA  ++++LVDTPGQIE+FTWSASGAIIT+A+A+S PT++ YI+DTPRTASP TFMSNMLYACSILYKT+LP +L FNK D+  H FA EWM DFEK+QE L D+  D+ G   Y ++L+ SM LVL+EFY  LR VGVSA +GEG+ DFF AV+EA +E+E +Y P+L     +R  + E  K  ++ERLMKD+ V
Sbjct:    9 TAPAEGSFEKKPVVILCIGMAGSGKTTFMQRLNSHLHSKNTPPYILNLDPAVSHMPYQANIDIRDTVDYKEVMKQYNLGPNGGILTALNLFTTKFDQVLGFVEKRANTVDHILVDTPGQIEIFTWSASGAIITDAIASSLPTVVAYIIDTPRTASPVTFMSNMLYACSILYKTKLPFILVFNKTDVQPHDFALEWMADFEKYQEALNDKARDEHGEGSYVNSLMGSMCLVLEEFYNNLRAVGVSAMTGEGMRDFFNAVEEARQEYETDYKPELDRLAAERAAQSEADKKTQLERLMKDMNV 309          
BLAST of NO04G01190 vs. NCBI_GenBank
Match: CDP08540.1 (unnamed protein product [Coffea canephora])

HSP 1 Score: 364.8 bits (935), Expect = 3.100e-97
Identity = 177/307 (57.65%), Postives = 235/307 (76.55%), Query Frame = 0
Query:   13 VPISVSVPGNDTASTLPAFRKKPIVLLFMGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGLDRQGDDMGYSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMKNREMERLMKDLK 320
            V I+ S+   + A   P+F++KP++++ +GMAGSGKTT + RL  H   +  + Y +NLDPAV S+P+ ANIDIRDTV YKEVM ++ LGPNG I+TSLNLF+T+FD+V++++EKRA +L+YVLVDTPGQIE+FTWSASGAIITEA A++FPT++ Y+VDTPR+ SP TFMSNMLYACSILYKTRLP+VL FNK D+  H FA EWM DFE F   LD    D  Y+STL RS+SL L+EFYK LR+VGVSA SG G+  FF+A++ +A E+   Y PDL  R+ +++  +E+ +   M+RL KD++
Sbjct:   29 VDIAQSMEKLNVADPCPSFKRKPVIIIVVGMAGSGKTTFMHRLVCHTMGSNVRGYVINLDPAVMSLPYGANIDIRDTVRYKEVMKEFNLGPNGGILTSLNLFSTKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVITYVVDTPRSTSPATFMSNMLYACSILYKTRLPLVLAFNKTDVAQHQFALEWMEDFEVFHAALD---SDHSYTSTLTRSLSLALEEFYKNLRSVGVSAVSGAGMDAFFKAIEASAEEYMENYKPDLDRRRAEKQQLEEQRRRENMDRLRKDME 332          
BLAST of NO04G01190 vs. NCBI_GenBank
Match: SAL99378.1 (hypothetical protein [Absidia glauca])

HSP 1 Score: 364.4 bits (934), Expect = 4.100e-97
Identity = 189/301 (62.79%), Postives = 238/301 (79.07%), Query Frame = 0
Query:   23 DTA--STLPAFRKKPIVLLFMGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGLDRQGDDMGYSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMKNR-EMERLMKDLKV 321
            DTA  S+  A  K+P V+L +GMAGSGKTT +QR+N HL++  T  Y +NLDPAV ++PF ANIDIRDTVNYKEVM QY LGPNG I+TSLNLF T+FDQVL  + KRA  + ++LVDTPGQIE+FTWSASGAIIT+ LA ++PT++ YI+DTPRT +P TFMSNMLYACSILYKT+LP +L FNK D++SH FA EWM DFEKFQ+ L R   D  Y S+L+ SMSLVLDEFY+ L+ VGVSA +G GV DFF+AVDEAA E+E+EY P+ +ER  + + E+EE + + ++ RLMKD++V
Sbjct:    3 DTAPESSSSAPTKQPPVILCIGMAGSGKTTFMQRINAHLHSQKTPPYVLNLDPAVGTLPFTANIDIRDTVNYKEVMKQYNLGPNGGILTSLNLFTTKFDQVLNFVAKRAESVSHILVDTPGQIEIFTWSASGAIITDTLAATYPTVIAYIIDTPRTTAPATFMSNMLYACSILYKTKLPFILVFNKTDVVSHDFAVEWMTDFEKFQDALRR---DTSYMSSLMNSMSLVLDEFYQHLKVVGVSAVTGHGVDDFFKAVDEAADEYEKEYKPE-IERMIRIKMEKEEKERQDQLNRLMKDVEV 299          
BLAST of NO04G01190 vs. NCBI_GenBank
Match: KFH64523.1 (hypothetical protein MVEG_09256 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 364.0 bits (933), Expect = 5.300e-97
Identity = 184/289 (63.67%), Postives = 224/289 (77.51%), Query Frame = 0
Query:   33 KKPIVLLFMGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGLDRQGDDMGYSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMKNREMERLMKDLKVE 322
            K+P V+L +GMAGSGKTT +QRLN HL+A     Y +NLDPAV ++PF ANIDIRDTVNYKEVM QY LGPNG I+T+LNLF T+FDQVL  +EKRAP L+Y+LVDTPGQIE+FTWSASG+IIT+ LA S+PT++ YI+DTPRTASP TFMSNMLYACSILYKT++P +L FNK D+  H FA EWM DFE FQE L +   D  Y S+L+ SMSLVLDEFY  L+ VGVSA +G G+ DF +AVDEA  E++ EY P+L    E+R  + E  K  +M RLMKD+ +E
Sbjct:   10 KRPPVILCIGMAGSGKTTFMQRLNAHLHAKKQPPYILNLDPAVGALPFQANIDIRDTVNYKEVMKQYNLGPNGGILTALNLFTTKFDQVLGFVEKRAPSLDYILVDTPGQIEIFTWSASGSIITDTLAASYPTMIAYIIDTPRTASPATFMSNMLYACSILYKTKVPFILVFNKTDVTPHDFAVEWMTDFEAFQEALQK---DKSYMSSLMNSMSLVLDEFYAHLKVVGVSAVTGSGMDDFLKAVDEAVIEYDTEYKPELERVLEERRRKTEADKEEQMARLMKDMAME 295          
BLAST of NO04G01190 vs. NCBI_GenBank
Match: KIR57011.1 (XPA-binding protein 1 [Cryptococcus gattii Ru294])

HSP 1 Score: 364.0 bits (933), Expect = 5.300e-97
Identity = 181/293 (61.77%), Postives = 233/293 (79.52%), Query Frame = 0
Query:   32 RKKPIVLLFMGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGL-DRQGDDMG---YSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMKNREMERLMKDLKV 321
            +K+P+V+L +GMAGSGKTTL+QRLN HL++  T  Y +NLDPAV  +P++ANIDIRDTV+YKEVM QY+LGPNG I+T+LNLF T+FDQVL  +EKRA  ++Y+LVDTPGQIE+FTWSASGAIIT+A+A+S PT++ YIVDTPRT SP TFMSNMLYACSILYKT+LP ++ FNK D+  H FA EWM DFEK+QE L D+  D+ G   Y ++L+ SM+LVL+EFY  LR VGVSA +GEG+  FF AV+EA +E+E +Y P+L     +R  + E  KN ++ERLM+D+ V
Sbjct:   22 KKQPVVILCIGMAGSGKTTLMQRLNSHLHSRNTPPYILNLDPAVSHMPYSANIDIRDTVDYKEVMKQYKLGPNGGILTALNLFTTKFDQVLGYVEKRAETVDYILVDTPGQIEIFTWSASGAIITDAIASSLPTVVAYIVDTPRTTSPVTFMSNMLYACSILYKTKLPFIIVFNKTDVQPHEFALEWMTDFEKYQEALNDKSRDEHGEGSYVNSLMSSMNLVLEEFYNNLRAVGVSAMTGEGMKAFFSAVEEARKEYETDYKPELDRLAAERAAQTEANKNAQLERLMRDMSV 314          
BLAST of NO04G01190 vs. NCBI_GenBank
Match: XP_019048912.1 (XPA-binding protein 1 [Kwoniella bestiolae CBS 10118] >OCF27842.1 XPA-binding protein 1 [Kwoniella bestiolae CBS 10118])

HSP 1 Score: 364.0 bits (933), Expect = 5.300e-97
Identity = 185/324 (57.10%), Postives = 238/324 (73.46%), Query Frame = 0
Query:    1 MSSTDQVSPPLHVPISVSVPGNDTASTLPAFRKKPIVLLFMGMAGSGKTTLVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYELGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSASGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPIVLTFNKIDILSHAFAQEWMGDFEKFQEGLDRQG----DDMGYSSTLIRSMSLVLDEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKREGEQEEMKNREMERLMKDLKV 321
            M  T Q  PP     S +  G  T +     +K+P+V++ +GMAGSGKTT +QRLN HL++  T  Y +NLDPAV  +P++ANIDIRDTV+YKEVM QY LGPNG I+T+LNLF T+FDQVL  +EKRA ++EY+LVDTPGQIE+FTWSASGAIIT+A+A+S PT++ Y+VDTPRT +P TFMSNMLYACSILYKTRLP ++ FNK DI  H FA +WM DFE +Q  L+  G     +  Y ++L+ SM LVL+EFY  LR VGVSA +GEG+  FFEAV+EA +E+ER+Y P+L     +R  + E  K  ++ERLMKD+ V
Sbjct:    1 MGETTQAPPP-----STAEAGPSTGTAAEGSKKQPVVIICIGMAGSGKTTFMQRLNSHLHSRNTPPYILNLDPAVSHMPYSANIDIRDTVDYKEVMKQYNLGPNGGILTALNLFTTKFDQVLGYVEKRAEDVEYILVDTPGQIEIFTWSASGAIITDAIASSLPTVVAYVVDTPRTTAPATFMSNMLYACSILYKTRLPFIIVFNKTDIQPHDFAIDWMKDFEAYQAALNDSGRNEHGESSYMNSLMSSMCLVLEEFYNNLRAVGVSAMTGEGMRGFFEAVEEARQEYERDYKPELDRLASERAAKTEADKKAQLERLMKDMNV 319          
The following BLAST results are available for this feature:
BLAST of NO04G01190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28521.16.000e-13384.48xpa-binding protein 1 [Nannochloropsis gaditana][more]
CBN74574.11.800e-10067.71conserved unknown protein [Ectocarpus siliculosus][more]
XP_021869538.16.700e-10061.24aerobic respiration-related protein [Kockovaella i... [more]
ORZ17650.12.200e-9860.40hypothetical protein BCR42DRAFT_325798 [Absidia re... [more]
ODO03009.11.800e-9761.46hypothetical protein I350_05853 [Cryptococcus amyl... [more]
CDP08540.13.100e-9757.65unnamed protein product [Coffea canephora][more]
SAL99378.14.100e-9762.79hypothetical protein [Absidia glauca][more]
KFH64523.15.300e-9763.67hypothetical protein MVEG_09256 [Mortierella verti... [more]
KIR57011.15.300e-9761.77XPA-binding protein 1 [Cryptococcus gattii Ru294][more]
XP_019048912.15.300e-9757.10XPA-binding protein 1 [Kwoniella bestiolae CBS 101... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009699NSK009699Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01190.1NO04G01190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|659679gene_1901Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100131g16gene2062Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01190.1NO04G01190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01190 ID=NO04G01190|Name=NO04G01190|organism=Nannochloropsis oceanica|type=gene|length=1074bp
ATGAGCAGCACCGATCAGGTATCACCACCACTGCACGTACCGATATCAGT
GTCAGTGCCAGGGAACGACACAGCATCCACCCTGCCCGCCTTCCGCAAGA
AACCCATCGTCCTCCTCTTCATGGGCATGGCGGGCAGCGGCAAGACAACC
CTGGTCCAGCGCCTCAATCTGCATCTCAACGCCAATGGTACCAAAAGCTA
CTATGTGAACCTCGATCCGGCCGTCAAGTCCGTCCCGTTCGCAGCCAATA
TCGACATCCGTGACACGGTCAACTACAAGGAAGTGATGAACCAGTACGAA
CTCGGGCCTAATGGAGCCATCATGACATCCCTCAACCTCTTCGCCACCCG
CTTTGATCAAGTGCTTACTATCCTGGAAAAACGAGCTCCTGAATTGGAAT
ATGTCCTCGTGGACACCCCCGGGCAAATCGAGGTTTTCACTTGGTCAGCC
TCCGGTGCAATCATTACTGAGGCACTCGCTACTTCCTTCCCAACCATCTT
AATTTACATTGTTGATACGCCTCGCACAGCCTCCCCGACCACCTTTATGA
GTAACATGCTCTATGCCTGTTCTATCTTGTATAAGACGCGGTTGCCGATT
GTGTTGACTTTCAATAAGATCGATATTCTGTCACATGCCTTCGCACAGGA
ATGGATGGGAGATTTTGAGAAATTTCAGGAGGGCTTGGATAGGCAAGGGG
ATGACATGGGGTACTCGAGCACGTTGATTCGGTCCATGTCATTAGTGTTA
GATGAATTCTATAAGACACTCAGGAATGTGGGCGTGTCGGCAGCGAGTGG
AGAGGGTGTGAGTGATTTTTTCGAGGCCGTGGATGAGGCGGCGAGGGAGT
TTGAGAGGGAATATTTGCCTGACTTGGTTGAGAGGAAGGAGAAGAGGGAA
GGGGAACAGGAGGAGATGAAAAACAGGGAGATGGAACGATTGATGAAGGA
CTTGAAGGTGGAGGGTGGTGGAGGAGGAGGAAGAGGAGGAGGAGGAGAAG
AACGGGGGGGGGGGATAGAGGACGGAGGGGGGGGGGGAAGGGAAGGAGGG
GAGCAGATAAGGGTAGAGAAATGA
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protein sequence of NO04G01190.1

>NO04G01190.1-protein ID=NO04G01190.1-protein|Name=NO04G01190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=358bp
MSSTDQVSPPLHVPISVSVPGNDTASTLPAFRKKPIVLLFMGMAGSGKTT
LVQRLNLHLNANGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMNQYE
LGPNGAIMTSLNLFATRFDQVLTILEKRAPELEYVLVDTPGQIEVFTWSA
SGAIITEALATSFPTILIYIVDTPRTASPTTFMSNMLYACSILYKTRLPI
VLTFNKIDILSHAFAQEWMGDFEKFQEGLDRQGDDMGYSSTLIRSMSLVL
DEFYKTLRNVGVSAASGEGVSDFFEAVDEAAREFEREYLPDLVERKEKRE
GEQEEMKNREMERLMKDLKVEGGGGGGRGGGGEERGGGIEDGGGGGREGG
EQIRVEK*
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Synonyms
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