NO04G01150, NO04G01150 (gene) Nannochloropsis oceanica

Overview
NameNO04G01150
Unique NameNO04G01150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2960
Alignment locationchr4:365575..368534 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:365575..368534 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G01150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01150.1NO04G01150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628088gene_1896Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01150.1NO04G01150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01150 ID=NO04G01150|Name=NO04G01150|organism=Nannochloropsis oceanica|type=gene|length=2960bp
ATGGAGAGCTTGCTGGTGTCCGCCACTGCCGGCCGAAGCGAAATGTCGTC
AGGCTTGCCATCTCCATCGGTCTCGACTGCTGGGGCAGGAGGCGCGCCCA
CGGGTGGGGGGGCGGTTGGAGGAGTCAACGAAGATGCGACCGCGCTGCAA
ATGCGAGAGCTCAAGAAGGAAGATGACACCCATGCCGGCCACTTGAGCAA
CAGCCACTTGCATGGTGGTACGGGCCGCGTATCCTCGCTTCCCCCCCAAC
TGCCGCATTCGCAACAACCACATGACCCGGACCAGGGAGGGGGGAAAATG
CTGCATCGTCTGCCGCCTCAGCCCCCTGTTGTGGACATGTCTCACCACCA
CCATCACCACCAGCAACAACAGCACCACCACCATCAGCAGCACCCTCACC
ATCAGCAGCACCCACATATGCAGCACCCGCCCCAGCCACCGCCCCACTTC
CAGCAGCAACCACATCATGTCACGCAAAAGCACCTCCAGCCGCAGCATAA
TGACGGGATGATGCGGATACAAGGGCTTGTGCATGGACATGGAGCCAGCT
CGGTCGCATCTACGAGCTCTTCTTCATCCAACCCGTCGGCCAACGCCATG
ATGGCGGCGCACCACCGACGTCACGGTCGGGAACAGCAGATGCTGATTCG
CGAAGACTTGATGGATGGGGACGACGACGATGACTTACTGGACGCATCAG
ACTTAATGGAGGAGGCATTAAGTGACAAGGTGAAGGGTATCGGTACCTTT
TACATCCTCATCGATAAGCACGTACGGAAACGCAAGCGGGGCTTCACGGG
CTTGCGGCGGTCGCAAAAAGCTGCCATTGTCAGgtaaggcataagttttg
actcatgactgtcgaactctcccatcatcttacgcttttttttgtctctc
ccttcctttcttcttccttctcttctccccctcctagATCTGCCTACAAC
ATCATCGAATCGATCTGCGACGTTTTTTGCCCCGGGGAGAGAATGGAGCT
TTTGGATGCGATCGCCAATATTCACCCGACCTACCGCCGGCGCTTCAAGC
GCAAGCTAGCCGCGACTGGGGTTGGTTCCACCATGCTGAGCGGAAGTTAT
TCATCGATGGATGGCATTGAAAGCGGAGGCATGAAGGGAGAAGAGGAAGG
AAGAGTTGGACGAGGGGGAGGCGGGGAGGGGGGGTCCTTTTCAGACGTAG
AAACCTACTATGGCTCTCCTGACAAGGCGTACCGAAAGCCGCTTTCCCCT
GTGTTAACCATGCTGGAGCAAAGTAAGCCTGAGCTTTTTAATATTCAGGT
TCTGGGTCAGAATCTGACGAAGGAGCAGCTGCTTTCTCAGTATAAACGGC
CGGCGGGTTCTACCATCGCTGTGTCTACCTCAGGCGGCCTCGCCAAGCCT
CATTCCCCCAACCTCCAGCAGCAACTTCAGCACCCGCCGCATCAAATACA
TCAGCCATCGTCACAGCAGCAGCAGCAGCAGTTACAGCAGGCTCCATATC
GCAATGCTCAACAGCAGCACGGCCCCGGTGTCATGCCGCCCGCTGGTTCT
TCTGGCTACCCTTCCCACCCTCATCACTCCCACCAGCATCACCAGCAGCA
ATCACAGCAACCGCTCAATCAGCAGCGACAGCAGCATCAGCAGCATACCG
GCAGTATTCATTCATCGCAAGGTGACGCTTCACAGTACGCGCAGCAGGAG
CAGCAGCCGCCGCCAGTGCATCACATGTATGGAGGGGTAGGAGCGCCTGC
CCCGCTTCCTCATCCCAACAATGCAGGTTGGCCTTCTCACATACCTCAGC
AACAGTATTCCCAGCAATCGCACCCTCAGCAGCAGCCACATCACCAACAG
CAGCAGCATCAACATCATCATCATCACCATCATCAGCAGCACCCTCAGCA
GCAACATCAACAGCAGCAGCAGCACGGTGGAGCCCAAGCATGCGGATCCC
CTTACTTTTCTCCCCCACAGCAGCACATCACCCCGCCCTTCGCTGCTGCC
GGTCCCCCCTCCGGACGCCAGCCCTGCCTCCCTCCCTCCCATCATGGCTC
CATGCCTCCCCACCCCTCCCTCGGCCACCGCCTCCAGCATTCAAGCTACC
CTGACGCCCCTATCCACCCCTCGGGCCCCTCTACCCACCTTATGCAACCT
CAGCAGCTCTCGTATACAAAGGGCTTAGGCCCTTCTTCGCAATATTTACA
AGGTTCAATGACGTCAAAAGCCCCGTACCATTATCCTTCTTCCCCACAGC
AGCAGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGGAACAACAATAT
CACTCAGTACCGGTGCATCGCCAAAAGCAGCCACAGCAGCAGCAGCATCA
ACAGCATCAACAGCATCAACAGCACCAGTTACATCAGCAGCAGGATCAAC
AGCAGCACCAACACCAGTCACAGCACCAGCAGCATCACCAGCAGCAACAA
CACCAGGGTGTTCCACCATCAAAAGTTGGATCGGGCAGCGGGCGTAGCAA
CACCGCTATCACTGCCGCCTTTGCAGGAGTAGCAGCCAGAGGTGAAGGTG
GAGGACAAGCTTCCCGACCGGTCATAGATCAACTCTCTCGCCTTGCAGCC
GGCACACTGGCAAAGCTGAGGAAGAGCTCAGAGGGGGAAGGGGGAGAGGG
GGGCAACGATAACAGCAGTGTCGGGAGCAACCGAACCACGGGCAACTTCT
CCGCATCTGCTCTCCATCATGTCTCTTCTTCTATCACCAGTGTCACTACT
CCTTATTCTGCTCCTTCTCCTGCCCCTGCCCGCTCTCCTCCCTTGGATAC
CGCGCCACTTGCTGGTGCTCCTGCCGCCGCCATTGCTTGCACGAGTGTCA
GGAGGGCAGACAGCAGCAGCAGAAGCAGCAGCAGCAGCAGCAGTAGCGGC
AGCAGTACCAGTAGCGATAGCAGTAGAAGTGGTGGTAGTAGCAGCAGCTC
TGCAGCCTAA
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protein sequence of NO04G01150.1

>NO04G01150.1-protein ID=NO04G01150.1-protein|Name=NO04G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=952bp
MESLLVSATAGRSEMSSGLPSPSVSTAGAGGAPTGGGAVGGVNEDATALQ
MRELKKEDDTHAGHLSNSHLHGGTGRVSSLPPQLPHSQQPHDPDQGGGKM
LHRLPPQPPVVDMSHHHHHHQQQQHHHHQQHPHHQQHPHMQHPPQPPPHF
QQQPHHVTQKHLQPQHNDGMMRIQGLVHGHGASSVASTSSSSSNPSANAM
MAAHHRRHGREQQMLIREDLMDGDDDDDLLDASDLMEEALSDKVKGIGTF
YILIDKHVRKRKRGFTGLRRSQKAAIVRSAYNIIESICDVFCPGERMELL
DAIANIHPTYRRRFKRKLAATGVGSTMLSGSYSSMDGIESGGMKGEEEGR
VGRGGGGEGGSFSDVETYYGSPDKAYRKPLSPVLTMLEQSKPELFNIQVL
GQNLTKEQLLSQYKRPAGSTIAVSTSGGLAKPHSPNLQQQLQHPPHQIHQ
PSSQQQQQQLQQAPYRNAQQQHGPGVMPPAGSSGYPSHPHHSHQHHQQQS
QQPLNQQRQQHQQHTGSIHSSQGDASQYAQQEQQPPPVHHMYGGVGAPAP
LPHPNNAGWPSHIPQQQYSQQSHPQQQPHHQQQQHQHHHHHHHQQHPQQQ
HQQQQQHGGAQACGSPYFSPPQQHITPPFAAAGPPSGRQPCLPPSHHGSM
PPHPSLGHRLQHSSYPDAPIHPSGPSTHLMQPQQLSYTKGLGPSSQYLQG
SMTSKAPYHYPSSPQQQQQQQQQQQQQQEQQYHSVPVHRQKQPQQQQHQQ
HQQHQQHQLHQQQDQQQHQHQSQHQQHHQQQQHQGVPPSKVGSGSGRSNT
AITAAFAGVAARGEGGGQASRPVIDQLSRLAAGTLAKLRKSSEGEGGEGG
NDNSSVGSNRTTGNFSASALHHVSSSITSVTTPYSAPSPAPARSPPLDTA
PLAGAPAAAIACTSVRRADSSSRSSSSSSSSGSSTSSDSSRSGGSSSSSA
A*
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Synonyms
Publications