NO04G01140, NO04G01140 (gene) Nannochloropsis oceanica

Overview
NameNO04G01140
Unique NameNO04G01140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2327
Alignment locationchr4:362265..364591 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:362265..364591 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01140.1NO04G01140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01140.1NO04G01140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01140 ID=NO04G01140|Name=NO04G01140|organism=Nannochloropsis oceanica|type=gene|length=2327bp
GGTGTGAGTGTGGGTGTTGTATCCATAAGTCGGGTGATAAGAGAGAGGAA
ATGCCATTGCTGGATCATCGAAAGGCACGAACCAACATCAAGGGCCGGAA
TGAATCGCGGATACTCGGATACTGGATATATACTATACTATACAAACTCT
GCCCTATACTATACAAACTCTGCCCTATATCTCACGATACAGGGCGATAT
GATCGATGTACTCGTAACACCATAACATCCTCATATACAGGGCATTTTGT
TGAGCGTGTGGCGGACAAGCGAATGGCCTCTTCTTCATTCACATCATCAT
CGGCGAATTCCAGCCCTCCCGAGTCAAGTCCATGGAACCTTACCACAATC
GGGAAGGGCGACTCAAGGAGGCTGCAGGACAACCTTGTGGCGACCAATCG
CGGCGGCCTCGAGTGCCAGGGCTGCGGCCGCGTGTTTTTGCGGTATGAGT
TGGATTGGGCGAACAAGAAGGGCGTCAACACAACGGCATGCGGCGTGCTG
ACTGGCCACTCTCAGAGCAAGCAGCACAAGGCGGAGAAGCCCGAGGAGGT
CCACATCATCACCTCCTTCTTCGGTGCTATCATCAGCCCCAGTCATCATT
CATCTTGCAGCTGGAGACCCCGGCAGCGCCAGCGGCGGCAAGTGGCGGGA
GAGCATCAGCAAGGGCAGGCGGATCGGTGATTGAATCAGTGGACGAGGAC
AATGACGATATCGCGGCCGCGTACATCAAGAGCTTCGCCTCTGTTTCCCA
AGACGGTAGGCGCTCCATTGCTCAGGCGCTGACCCCGACAGTACCGCGAC
GCGTGGGCAGAGGATGGGACAGCTGCCGTTCGTGAGGGAGGAGTTGTTCC
GAGCGGAGGAGACGACGGTGCATATGCGGGCGATCGCGTAGGTGGCGGGT
GGAGAGGAGGGTGTGGTGGAGTTAGAGCGCGGGCATTACACTTCCAAGCA
GGCCTTTCTCTTCAAGGGTGGTCACTTCATGAGCCTGCTCAAGCCCGAGA
TGGTGGTTATTGAGGGCGAAAACAGCACGTAAGCAATCATGCAGATCCCC
CTTGACCACCTGTAGGAGCGGCTCGGCCTCTTAGGGGACGAGGTACGGCT
AGTTGCTGGTGAGGGGTTTAGAAAGCACTTGGAAATCCCGCTTGTTCCCT
AAGCGTCAGGGAAGGAGGCCCGGGGGGGCGAGGTGGGGACCGAGATCGTG
TCCTGCAAACCATGCCGCGGGTCGCTCGACCTGTCGGAGATGACGCAGAA
GAACATGCGCCACCACATCGCTGGGCATGCTTTCCTTTCGGACGTGCCAA
TGAGCATCTGCGGCTTCTGCGGTGTGGGTATAGCGGAAATGGGCTGCAGT
CTGGTGGTGAAACTGAACTAGGTGGAATCCACCTGCTCACTCAAGCCCGC
CAATTTCGAACACGGCCAGCACGAAGGGACAAGAAAGCAAACGCTGGGGG
ATCGACTGAAGTTTCATACGGACGTGGAAGCTGCTACCTCTGCGGCTCTA
CGGCGGAGCAAGCCCAAGGCCACTGTGCCGAACATCCCTGCCTCGGAGAG
TCGATCTTGAAGTACAACGTCATCCCCCACCTGCTCCAGAACGATCATAC
CCTCCCTGTGGGGCCAGGAATGGCGGCGGCGCGGGCGGCCTGTGCTGCTG
GTGTTGCACAATTTCATTTCTTTGGAAAAGCGGGATGGGAAACCCTATGA
TTTGTCCTCCCCTCCTCCCCCCCCGCTTGGCACGCCAACGAGGATCGATC
TGCTTTGAGATTTATTGAGGAGGGCGGAAGGTATAGGATTCCTTGGAGAC
ACATCTATATAGACATTGAAAAGAGGGTGGACATTCACTGCTGTCGCTGC
GTCTTCCAAGACTGACTTGGTTTCAAGATGGATCTCTTCCGACGGGAATT
CTGCTTGGTGGGCAGTGGCAAGTTGGCCGCGGAGGAGGGCGGTTGAATGG
AGGGTGGGCGTGCCAAGCGAGCTGAGCAGAGGAGAGGAGATGGGTATCGC
GTTCCCTGGCTCGGAGGCTGGTGAAAAGGGCGAGGAGGGTACTGGCATTT
GCGGTGCAGGAGATGGGAATGTCCTGTACAGTGGCCTGAGGAAGGGGTCG
GCGCAGCGTCAGCGGTGGCAGTGGTGGAGGTGGAAGATGATAGAGAGGAA
AAAGAAGGGGAGAAAGATGAGGGAGAGGACGAGGGGGAGAGAGGGGCAGG
TGCTCCGCGGGGGAAGAGGCTGTCGGATGCGGGGAGGGCGTGTCCGGCCA
CCAAGCGGCGTTAGCAAAACTTAAGTTGGACAAAGCAAACGATGGAGTAA
AAATTAAAAAATCAAAGTTATAGCACC
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protein sequence of NO04G01140.1

>NO04G01140.1-protein ID=NO04G01140.1-protein|Name=NO04G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=210bp
MPLLDHRKARTNIKGRNESRILGYWIYTILYKLCPILYKLCPISHDTGRY
DRCTRNTITSSYTGHFVERVADKRMASSSFTSSSANSSPPESSPWNLTTI
GKGDSRRLQDNLVATNRGGLECQGCGRVFLRYELDWANKKGVNTTACGVL
TGHSQSKQHKAEKPEEVHIITSFFGAIISPSHHSSCSWRPRQRQRRQVAG
EHQQGQADR*
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Synonyms
Publications