NO04G01090, NO04G01090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01090 vs. NCBI_GenBank
Match: EWM28516.1 (HPP family protein [Nannochloropsis gaditana]) HSP 1 Score: 302.4 bits (773), Expect = 1.800e-78 Identity = 190/343 (55.39%), Postives = 228/343 (66.47%), Query Frame = 0 Query: 10 HRPGD-EDNNGHETSSNSSDGNCAVGGG-AGYKAKEALSQYFKKWLGVSNKRDTHRVPSLRHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYWSHYFPLYEKSKLLIFGCCXXXXXXXXXXXXXXXXXXXXXXXXXXRSNSPPPSCPQVSSIELVDDDWVDESGPSFTPRGS------QTPSNGWAADAVATRGAGEESGHILNSQVLEEEDTSSPV 345 H+ D + N SS S G+ G G AKE L+QY KWLGV ++D +R PSLRHSFVS QAT S++ LAFLD M MFLVGSFGATAVLLYSA SPLAQPR V+ GHFVS+LAGVTVYK++GN+PY SAG+AVGLAIF MERTN+ HPPGGATALVAIVGG+ V +AGYWYVLFPC +GA +ML+VALVCNN+DP+R YPQYWS FP++ + ++ G C XXXXXXXXX ++ P P+V+SIELVD D P+ TP GS PS G A+ GAG GH+++ VLEEEDT+ PV Sbjct: 7 HKDNDVQRRNVCNDSSPKSSGSGKEGREVVGSMAKEFLTQYLSKWLGVPGRKDGNRAPSLRHSFVSLFQATLSISVLAFLDMGMTISAEDFMFLVGSFGATAVLLYSAHGSPLAQPRNVMGGHFVSSLAGVTVYKVIGNVPYLSAGLAVGLAIFCMERTNTLHPPGGATALVAIVGGEAVTRAGYWYVLFPCCTGAFMMLVVALVCNNMDPERVYPQYWSDNFPIWHTCRQILGGRC--------GDCGRKANRXXXXXXXXXXXSTSPRRYPRVASIELVD----DLDAPAETPPGSPRWRAVTMPSPGHAS---TRTGAG---GHVVDPVVLEEEDTAFPV 331
BLAST of NO04G01090 vs. NCBI_GenBank
Match: OQX03372.1 (HPP family protein [Thiothrix lacustris]) HSP 1 Score: 159.8 bits (403), Expect = 1.500e-35 Identity = 88/182 (48.35%), Postives = 116/182 (63.74%), Query Frame = 0 Query: 45 LSQYFKKWLGVSNKRDTHRVPSLRHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYW 227 L Y K G NK H V + R++ S+L A L L +L E + L+G FGATAVLLY +P++P AQPR VL GHF+SA+ GVTVY ++ + ++ +AV +A LM T++THPPGGATAL+AI+G D + GYWYVL P + G +L+LLVAL+ NNL P R YP YW Sbjct: 5 LKNYLAKMRGGGNK-SPHAV-NWRNALCSWLGAFIGLALLGWLSTSSSLTEHDHLILIGPFGATAVLLYGSPAAPFAQPRYVLGGHFISAVVGVTVYLLLPEPLWLASALAVSIATVLMYLTHTTHPPGGATALIAIIGSDSIHAQGYWYVLNPVMLGIVLLLLVALLVNNLSPLRKYPNYW 184
BLAST of NO04G01090 vs. NCBI_GenBank
Match: OGG95444.1 (hypothetical protein A2527_04880 [Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_50_16] >OGG97897.1 hypothetical protein A2508_10135 [Candidatus Lambdaproteobacteria bacterium RIFOXYD12_FULL_49_8]) HSP 1 Score: 157.9 bits (398), Expect = 5.600e-35 Identity = 84/182 (46.15%), Postives = 119/182 (65.38%), Query Frame = 0 Query: 45 LSQYFKKWLGVSNKRDTHRVPSLRHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYW 227 + YF K G K + + + S+L + ++ +A L YF + + +M ++GSFGA+AVL+Y A SSPLAQPR ++ GHF+SAL GV ++ G++P + +AV LAI LM+ T + HPPGGATAL+A++G D + GY+Y L P LSGAL+ML+VAL+ NNL P R YP YW Sbjct: 2 IKAYFAKMAG---KGQSAPLTPPAEIYWSWLGSFLGISAVAGLHYFWAAPQDLVM-IIGSFGASAVLVYGAISSPLAQPRNLIGGHFLSALVGVACFQFFGDMPVLAGALAVSLAIVLMQLTITLHPPGGATALIAVIGSDNLHNLGYFYALIPALSGALVMLVVALLVNNLAPTRKYPMYW 179
BLAST of NO04G01090 vs. NCBI_GenBank
Match: CRH07176.1 (putative transportor belongs to HPP family protein [magneto-ovoid bacterium MO-1]) HSP 1 Score: 155.6 bits (392), Expect = 2.800e-34 Identity = 78/161 (48.45%), Postives = 114/161 (70.81%), Query Frame = 0 Query: 64 VPSLRHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQ 225 +P ++ F S+L + + +A+L +F S + ++F++GSFGA+AVL+Y+A SPL+QPR +L GH VSAL GV V++++G +P+ +A +AV LAI M+ T + HPPGGATAL+A++G D + + GY Y L P LSGA +L+VALV N L P R YPQ Sbjct: 16 IPPIQELFWSWLGSFVGIGLVAWLHHFFFSGQD-LVFIIGSFGASAVLIYAAIGSPLSQPRNLLGGHLVSALVGVAVFQLVGGVPWLAAALAVSLAIVAMQLTRTVHPPGGATALIAVIGSDTIHQLGYLYALVPALSGATCLLVVALVTNRLAPGRSYPQ 175
BLAST of NO04G01090 vs. NCBI_GenBank
Match: KGO34555.1 (membrane protein [Desulfobulbus sp. Tol-SR]) HSP 1 Score: 150.6 bits (379), Expect = 8.900e-33 Identity = 86/180 (47.78%), Postives = 118/180 (65.56%), Query Frame = 0 Query: 47 QYFKKWLGVSNKRDTHRVPSLRHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYW 227 +YF K G N + RV SL + S++ + +T +A L Y + S ++ L+GSFGA+AVL+Y A SPLAQPR ++ GH +SA GVT ++ G+ + +A VAV AI LM T + HPPGGATAL+A++GGD V + GY YVL P SGAL+MLLVAL NN+ +R YP++W Sbjct: 2 EYFTKMRG--NGQAPPRV-SLAEVWWSWIGSFLGITAVALLHYRLVD-PSGLVLLIGSFGASAVLIYGAIRSPLAQPRNLIGGHVLSAFLGVTAFQWFGDQTWLAAAVAVSTAIALMHLTRTLHPPGGATALIAVIGGDSVHRLGYLYVLMPATSGALVMLLVALAINNIPKNRRYPEFW 177
BLAST of NO04G01090 vs. NCBI_GenBank
Match: OGH01895.1 (hypothetical protein A2557_04775 [Candidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_56_26] >OGH02284.1 hypothetical protein A2426_03255 [Candidatus Lambdaproteobacteria bacterium RIFOXYC1_FULL_56_13] >OGH10054.1 hypothetical protein A2600_09505 [Candidatus Lambdaproteobacteria bacterium RIFOXYD1_FULL_56_27]) HSP 1 Score: 150.6 bits (379), Expect = 8.900e-33 Identity = 83/182 (45.60%), Postives = 112/182 (61.54%), Query Frame = 0 Query: 45 LSQYFKKWLGVSNKRDTHRVPSLRHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYW 227 + +YF K G + T S + S+L + + +A + ++ L+GSFGATAVLLY AP+SPLAQPR +L GHF+SAL GVT K++ P ++ +AV LAI +M T + HPPGGATAL+A+ G + GY+Y P LSGALLML+VAL+ NNL P R YP +W Sbjct: 3 VKEYFSKMKGRTVSPPT---VSRMETLWSWLGSFLGILAVAVAHWSWALTTPDMVMLIGSFGATAVLLYGAPASPLAQPRNLLGGHFLSALVGVTSLKLLAPYPELASALAVSLAIVVMHLTKTLHPPGGATALIAVTGSQRIHDLGYFYAFIPALSGALLMLVVALLVNNLAPARRYPDFW 181
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_084457825.1 (HPP family protein [Desulfocurvus vexinensis]) HSP 1 Score: 150.6 bits (379), Expect = 8.900e-33 Identity = 82/179 (45.81%), Postives = 115/179 (64.25%), Query Frame = 0 Query: 48 YFKKWLGVSNKRDTHRVPSLRHSFVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYW 227 YF+K G + R +F SFL + +T + L+ + ++ M L+GSFGA+AVLLY AP++PL+QPR +L GH +SAL GV +G++P+ +AG+AV AI LM T + HPPGGATAL+A++GG+ V GY Y L P L+GAL++L VAL+ NN+ R YP YW Sbjct: 8 YFRKMCGCGT---NGFCVNFRETFWSFLGSLAGITAVGALNAVLLD-QTGAMLLIGSFGASAVLLYGAPTAPLSQPRNLLGGHVLSALVGVACAAHLGHVPWLAAGLAVSTAIALMHLTGTLHPPGGATALIAVIGGEPVRALGYLYALVPALAGALVLLAVALLVNNIPKTRQYPVYW 182
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_089026691.1 (HPP family protein [Chryseobacterium sp. T16E-39] >ASK29549.1 HPP family protein [Chryseobacterium sp. T16E-39]) HSP 1 Score: 150.6 bits (379), Expect = 8.900e-33 Identity = 80/171 (46.78%), Postives = 119/171 (69.59%), Query Frame = 0 Query: 68 RHSFVSFLQATFSLTTLAFL-DYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYWSHYFPLYEKSK 238 + F SFL A F + +AF+ +++ +E+ +FL+GSFGA++VL+Y A SPLAQPR ++ GH +SA+AGVTVY+I+ +I + SA +AV +I LM+ T + HPPGGATAL+A+ + + GYWYVL P LSG L++ LVAL NN+ P+R YP + + + L +K + Sbjct: 25 KEHFWSFLGAFFGIGIIAFIQSHYLLEQEN--VFLIGSFGASSVLIYGAIQSPLAQPRNLIGGHVISAIAGVTVYQIVPDILWLSAPLAVSFSIVLMQYTKTLHPPGGATALIAVTSSGKIPELGYWYVLSPVLSGCLILFLVALFFNNITPNRSYPAH-NRFIRLLKKKR 192
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_011712159.1 (HPP family protein [Magnetococcus marinus] >ABK42989.1 HPP family protein+B94 [Magnetococcus marinus MC-1]) HSP 1 Score: 149.8 bits (377), Expect = 1.500e-32 Identity = 75/153 (49.02%), Postives = 111/153 (72.55%), Query Frame = 0 Query: 71 FVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYP 224 F S+L + + +A+L + +++ ++F++GSFGA+AVL+Y A SSPLAQPR +L GH +SAL GV V++ MG++P+ +A +AV LAI M+ T + HPPGGATAL+A++G + GYWY L P LSGA+ +L+VAL+ N+L P R+YP Sbjct: 22 FWSWLGSFLGIGLVAWLHDHLLTQQD-LVFIIGSFGASAVLIYGAISSPLAQPRNLLGGHLISALVGVAVFQTMGSLPWLAAALAVSLAIVAMQFTRTLHPPGGATALIAVIGSQRIHDLGYWYALLPALSGAICLLVVALLVNHLAPGRNYP 173
BLAST of NO04G01090 vs. NCBI_GenBank
Match: WP_013164330.1 (HPP family protein [Desulfurivibrio alkaliphilus] >ADH86813.1 HPP family protein [Desulfurivibrio alkaliphilus AHT 2]) HSP 1 Score: 149.8 bits (377), Expect = 1.500e-32 Identity = 78/156 (50.00%), Postives = 105/156 (67.31%), Query Frame = 0 Query: 71 FVSFLQATFSLTTLAFLDYFMQSKESYIMFLVGSFGATAVLLYSAPSSPLAQPRAVLMGHFVSALAGVTVYKIMGNIPYFSAGVAVGLAIFLMERTNSTHPPGGATALVAIVGGDVVWKAGYWYVLFPCLSGALLMLLVALVCNNLDPDRHYPQYW 227 F S+L A + +A L Y + S ++ +VGSFGA+AVL+Y AP+ PLAQPR +L GH VSAL GV + + +A +AV AI LM T + HPPGGATAL+A++GG+ + + GYWY+LFP SGAL+MLLVAL+ NN+ R YP +W Sbjct: 23 FWSWLGAFLGIAAVALLHY-RWLEGSDLLLIVGSFGASAVLIYGAPAGPLAQPRNLLGGHLVSALVGVACLQFFAPQLWLAAALAVATAIALMHLTKTLHPPGGATALIAVIGGEEIHQLGYWYLLFPIASGALIMLLVALLINNIPASRRYPVFW 177 The following BLAST results are available for this feature:
BLAST of NO04G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01090 ID=NO04G01090|Name=NO04G01090|organism=Nannochloropsis oceanica|type=gene|length=4716bpback to top protein sequence of NO04G01090.1 >NO04G01090.1-protein ID=NO04G01090.1-protein|Name=NO04G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bpback to top Synonyms
Publications
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