NO04G01060, NO04G01060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01060 vs. NCBI_GenBank
Match: EWM28514.1 (Isochorismatase [Nannochloropsis gaditana]) HSP 1 Score: 324.3 bits (830), Expect = 2.800e-85 Identity = 163/212 (76.89%), Postives = 187/212 (88.21%), Query Frame = 0 Query: 1 MATASLVRAVGKLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAELDVANVEYPIPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEHAAGTPSPFEELVKTNAAL 213 M +++ RA+GKLQP TTFLLCD+QERFRDVIWHFPQVIRTAK MTAVG+ LQIPTLA+EQYPKAFGATV EL A V+Y IPTFEKK+FSM+T+++KA++ PERKT VLFGIEAHVCVQQTALDLLEQGYAVH+LVDGVSSQ+AHDRAVALRRME AGA LTTAESLVFML+ ASHPQF+TI+ LIKEH AG P+PF +L+K N+AL Sbjct: 20 MTASNVARAIGKLQPKTTTFLLCDVQERFRDVIWHFPQVIRTAKFMTAVGQELQIPTLASEQYPKAFGATVPELKAAAVDYCIPTFEKKMFSMLTDELKAQMQCEPERKTVVLFGIEAHVCVQQTALDLLEQGYAVHILVDGVSSQKAHDRAVALRRMEKAGAFLTTAESLVFMLMQTASHPQFKTISFLIKEH-AGEPNPFNDLLKENSAL 230
BLAST of NO04G01060 vs. NCBI_GenBank
Match: CBJ29063.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 206.1 bits (523), Expect = 1.100e-49 Identity = 106/198 (53.54%), Postives = 140/198 (70.71%), Query Frame = 0 Query: 1 MATASLVRAVGKLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAELDVAN--VEYPIPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEHAA 197 MA A+ R +GK+ P T F CD+QERFRD+I + P VI TAK M V + L++P + TEQYPKA TV EL+V + +P FEKKLFSM T++V+ ++ + P+RK VLFGIEAHVCV QT LDLL+ GY VHV+ DGVSSQ+ HDRAVAL+RM+ +GA LT+AE + F LL A + +FR ++ L+K+ A Sbjct: 63 MAVATASRRLGKIFPSSTVFFACDVQERFRDLIHNMPAVISTAKFMLDVSQELEVPCIVTEQYPKALLHTVPELNVGKGPDQINVPIFEKKLFSMCTKEVEEELKKLPDRKDAVLFGIEAHVCVTQTCLDLLDLGYDVHVVCDGVSSQKPHDRAVALQRMQQSGAFLTSAEQVTFQLLHTAENEKFRAVSNLVKKRNA 260
BLAST of NO04G01060 vs. NCBI_GenBank
Match: EJK72134.1 (hypothetical protein THAOC_06363, partial [Thalassiosira oceanica]) HSP 1 Score: 195.7 bits (496), Expect = 1.500e-46 Identity = 105/209 (50.24%), Postives = 140/209 (66.99%), Query Frame = 0 Query: 1 MATASLVRAVGKLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAE-----LDVANVEYPIPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEHAAGTPSPFEE 205 M+ + R+VGKL P + L+CD+QERFR +I VI T K MT V K L IP +ATEQY K FG T+ + D+ + P+ FEKK FSMIT++V + + E+ R +++L GIEAHVC+QQTALDLLE G VH++ DGVSSQ+ +DR +ALRR+E +GA LTTA+S FMLLG A H F+ ++ L+K H A P+ F E Sbjct: 125 MSLQAAARSVGKLSPSNSVLLVCDVQERFRPLISKMETVINTTKFMTGVAKKLHIPMVATEQYSKVFGKTIPDSFADPSDIGSTSCPV--FEKKKFSMITDEVASHL-ESLGRSSYLLVGIEAHVCLQQTALDLLEAGNDVHIVADGVSSQQTYDREMALRRLETSGAFLTTAQSAAFMLLGSADHADFKAVSKLVKAHMA-LPNEFNE 329
BLAST of NO04G01060 vs. NCBI_GenBank
Match: OLP81730.1 (Isochorismatase domain-containing protein 1 [Symbiodinium microadriaticum]) HSP 1 Score: 193.0 bits (489), Expect = 9.700e-46 Identity = 100/186 (53.76%), Postives = 128/186 (68.82%), Query Frame = 0 Query: 9 AVGKLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAELDVANVEYPIPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEH 195 ++G+L+P T FLLCD+QERFRDVI P+VI AK M G+ L IP + TEQYPKA G TV ELDV+ FEK FSM T++ A +A ++K V+FG+E HVCVQQTA DLL +G+ VHVL DGVSSQRA DR VAL+R+ AG +TTAES +F LL PQF+ ++G++K + Sbjct: 6 SLGRLEPASTVFLLCDVQERFRDVIDRMPEVIAAAKAMMDAGEALSIPIIITEQYPKALGHTVPELDVSKAN----VFEKTKFSMCTDEFLAYLASL-DKKDAVIFGVETHVCVQQTAFDLLSKGFQVHVLADGVSSQRAPDREVALQRLRQAGCFVTTAESALFELLRSKDAPQFKAVSGVVKAY 186
BLAST of NO04G01060 vs. NCBI_GenBank
Match: XP_002180462.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47870.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 189.1 bits (479), Expect = 1.400e-44 Identity = 98/187 (52.41%), Postives = 132/187 (70.59%), Query Frame = 0 Query: 10 VGKLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAE--LDVANVEYPIPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEH 195 VGKLQP T LLCD+QERFR +I + V+ T + MT+VGK L +P LAT+QY K FG TV + D +++ IP F+KK FSM+TEDV ++ + ++ T+++ GIEAHVCVQQT LDLLE+G VHV+ D VSSQ+A+DR +AL+R++ AG LTTA+S FMLL A H F+ ++ L EH Sbjct: 14 VGKLQPESTALLLCDMQERFRPLIHNMETVVNTCRYMTSVGKALNVPVLATQQYTKVFGETVPDCFADPQDLQ-TIPNFDKKKFSMLTEDVD-RVLDEWKKDTYIIMGIEAHVCVQQTCLDLLERGANVHVIADAVSSQQAYDREIALQRLQAAGCFLTTAQSAAFMLLQSADHSNFKAVSKLTVEH 198
BLAST of NO04G01060 vs. NCBI_GenBank
Match: XP_002288394.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93830.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 188.0 bits (476), Expect = 3.100e-44 Identity = 94/189 (49.74%), Postives = 129/189 (68.25%), Query Frame = 0 Query: 8 RAVGKLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAE--LDVANVEYPIPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEH 195 RAVG+L P + L+CDIQE FR +I++ VI T+K MT V K L +P + ++QY K FG T+ + D ++ + FEKK FSM+T + + R +F+L GIEAHVC+QQT LDLLEQG+ VH++ DGVSSQ+ +DR +ALRR E AGA +TTA+S FML+G A HP F+ ++ L+KEH Sbjct: 9 RAVGRLSPSKSVLLVCDIQELFRPLIYNMETVINTSKFMTGVAKELDVPVVLSQQYTKVFGPTITDAIADPKDIGTTVVPFEKKKFSMLTPECSEHLTSL-GRTSFLLVGIEAHVCLQQTVLDLLEQGHDVHIIADGVSSQQKYDREMALRRCEGAGAFVTTAQSAAFMLMGTADHPNFKAVSKLVKEH 196
BLAST of NO04G01060 vs. NCBI_GenBank
Match: GAX28268.1 (hypothetical protein FisN_27Hh081 [Fistulifera solaris]) HSP 1 Score: 186.4 bits (472), Expect = 9.100e-44 Identity = 96/184 (52.17%), Postives = 122/184 (66.30%), Query Frame = 0 Query: 12 KLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAELDVAN-VEYPIPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEH 195 KL P T L+CD+QERFR +IW V+RT + MT + L IP + TEQY KAFG T+AE N + FEKK FSM+T + ++ + PER TFVL GIEAHVCVQQT LDLL VH++ DG+SSQ+ +DR +AL+RM+ AGA LTTA+S FML+ A HPQF+ + L EH Sbjct: 10 KLHPGKTVLLVCDVQERFRSLIWRCETVVRTTQYMTRLAALLDIPVVVTEQYKKAFGPTIAECFAENTIPSTAHVFEKKQFSMLTPPLLQQLQQYPERDTFVLVGIEAHVCVQQTCLDLLALQKEVHLVADGISSQQPYDREIALQRMQQAGAFLTTAQSAAFMLMQTADHPQFKAFSQLTVEH 193
BLAST of NO04G01060 vs. NCBI_GenBank
Match: GAX75726.1 (hypothetical protein CEUSTIGMA_g3169.t1 [Chlamydomonas eustigma]) HSP 1 Score: 186.4 bits (472), Expect = 9.100e-44 Identity = 97/193 (50.26%), Postives = 129/193 (66.84%), Query Frame = 0 Query: 10 VGKLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAELDVANVEYPIPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEHAAGTPSPF 203 +GKL P + +CD+QE+FR VI HFP VI TA+ M LQ+P +ATEQYPKA G+T +EL V + P K LFSM+T +V+ + + P K +L GIEAHVCV QT LDL+E+G+ VH++VDGVSSQR HDRAV + RM AGA +TT+E ++F ++ A H F+ I+ L+KE A P PF Sbjct: 7 IGKLIPSTSALFVCDVQEKFRPVISHFPAVIDTARRMIRGANTLQLPVIATEQYPKALGSTCSEL-VEVLTPTSPIVPKTLFSMLTPEVEEALQKMPNVKQVMLLGIEAHVCVLQTTLDLMERGFEVHLVVDGVSSQRLHDRAVGIHRMSQAGAFITTSEMILFQMMKDAKHKDFKAISALVKESQA-EPIPF 197
BLAST of NO04G01060 vs. NCBI_GenBank
Match: OEU16394.1 (Isochorismatase hydrolase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 185.3 bits (469), Expect = 2.000e-43 Identity = 97/187 (51.87%), Postives = 124/187 (66.31%), Query Frame = 0 Query: 9 AVGKLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAELDVANVEY-PIPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEH 195 +VGKL+P T FLLCDIQ+RFR + W +I TAK MT+V K L IP + T+QY K FG TV + + FEKK FSM T++VK+ + +T R + V+FGIEAHVCVQQT LDLLE G VH++ D VSSQ+ +DR +AL RM AGA LTTA+S FML+ A H F+ ++ L EH Sbjct: 19 SVGKLKPENTVFLLCDIQDRFRPLTWRGETIINTAKYMTSVAKELDIPIVITQQYTKVFGETVKDTFADQEHFASCKIFEKKRFSMCTDEVKSHM-QTLNRDSVVIFGIEAHVCVQQTCLDLLEDGKEVHIIADSVSSQQPYDRELALNRMSQAGAFLTTAQSAAFMLMQSAEHANFKAVSKLTVEH 204
BLAST of NO04G01060 vs. NCBI_GenBank
Match: PNW79169.1 (hypothetical protein CHLRE_09g403034v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 184.5 bits (467), Expect = 3.400e-43 Identity = 100/197 (50.76%), Postives = 128/197 (64.97%), Query Frame = 0 Query: 8 RAVGKLQPVGTTFLLCDIQERFRDVIWHFPQVIRTAKLMTAVGKHLQIPTLATEQYPKAFGATVAELDVANVEYP--IPTFEKKLFSMITEDVKAKIAETPERKTFVLFGIEAHVCVQQTALDLLEQGYAVHVLVDGVSSQRAHDRAVALRRMENAGAHLTTAESLVFMLLGGASHPQFRTIAGLIKEHAAGTPSPF 203 R +GKL+P + +CD+QE+FR +I FP VI T K M K L IP L TEQYPKA G+TV+E VA V P P F K LFSM+T +V + + P+ K +L GIEAHVCV QT+LDL+E+GY VH+L DGVSS R H RA AL+RM AG +T+E +F L G A HP+F+ ++ L+KE A P F Sbjct: 4 RILGKLRPSTSALFVCDVQEKFRPLIAGFPTVIDTTKRMVLGAKCLDIPVLVTEQYPKALGSTVSE--VAGVLPPGTPPAFAKTLFSMLTPEVDSWLKTKPDVKQVMLVGIEAHVCVFQTSLDLIERGYEVHLLTDGVSSSRPHHRAAALQRMAQAGVLFSTSEMALFQLCGDAKHPRFKEVSALVKEGQAAEPFAF 198 The following BLAST results are available for this feature:
BLAST of NO04G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01060 ID=NO04G01060|Name=NO04G01060|organism=Nannochloropsis oceanica|type=gene|length=1062bpback to top protein sequence of NO04G01060.1 >NO04G01060.1-protein ID=NO04G01060.1-protein|Name=NO04G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=213bpback to top Synonyms
Publications
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