NO04G01020, NO04G01020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01020 vs. NCBI_GenBank
Match: EWM28454.1 (hypothetical protein Naga_100636g3 [Nannochloropsis gaditana]) HSP 1 Score: 387.9 bits (995), Expect = 3.400e-104 Identity = 207/288 (71.88%), Postives = 230/288 (79.86%), Query Frame = 0 Query: 60 KGPSPVPGKSGNESRTPSRAELYNKKTNQNVSESMEEVTGMRRRRNQDVPCNREPSPDHPSSSSMXXXXXXXXXXXXXATSTPGGGSAVLSAVARGMLGVSKWTLGSVANQLGGPFGWGEFMFAWVSDITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARNVIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQENAAYSRERVAQMSPFEPGGIG 348 +GPSP PG++ +ESR LY++ QNVSESMEEVTG+RRR R PSP+ + +STPGGG +VL A+ RG+LGVSKWTLGS++NQLG PF W EFMFAWV ++TPPRLKRLA IFWDAGAHITKLAYT GG ELGFAARNVIDGLVET+AAPKGRA VLE GMTFVK AEAVDTPEMHAAITQGFKLG+RGLEVLATEQAKD +SN+SDFLSRL RLANAPETTLAVAEFVTVVCHALAQENAAYSRERV+Q+SPFE G G Sbjct: 88 RGPSPYPGRT-SESRA---GLLYHQNVAQNVSESMEEVTGLRRR--HPAASERAPSPERDGVHAQ--------GADRRRSSTPGGGPSVLGALGRGVLGVSKWTLGSLSNQLGPPFAWAEFMFAWVREVTPPRLKRLAIIFWDAGAHITKLAYTSGGEELGFAARNVIDGLVETIAAPKGRAFVLEGGMTFVKFAEAVDTPEMHAAITQGFKLGSRGLEVLATEQAKDFLSNVSDFLSRLVRLANAPETTLAVAEFVTVVCHALAQENAAYSRERVSQLSPFEGAGEG 361
BLAST of NO04G01020 vs. NCBI_GenBank
Match: ETI36793.1 (hypothetical protein F443_17137 [Phytophthora parasitica P1569] >ETK77002.1 hypothetical protein L915_16679 [Phytophthora parasitica] >ETL30445.1 hypothetical protein L916_16585 [Phytophthora parasitica] >ETL83671.1 hypothetical protein L917_16407 [Phytophthora parasitica] >ETM36865.1 hypothetical protein L914_16514 [Phytophthora parasitica] >ETO65513.1 hypothetical protein F444_17179 [Phytophthora parasitica P1976] >ETP06616.1 hypothetical protein F441_17011 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 71.2 bits (173), Expect = 7.000e-9 Identity = 48/183 (26.23%), Postives = 92/183 (50.27%), Query Frame = 0 Query: 148 VLSAVARGMLGVSKWTLGSVANQLGG----PFGWGEFMFAWVSDITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARNVIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQE 327 ++ AV V + + VA++L G P ++ + +TP R + L + A ++ + E G +LG + + + D V ++ GR +VL S T K+A+A++TPE AA Q F+ ++ A++ + ++S+ S+ L+ + +A +PE ++ +AE T + H L E Sbjct: 2 IMDAVWWATTKVDESVVNPVASRLAGSVANPAVLSFLLWDRLKTLTPQRARDLTRLLATALSNALGVFGAERGQQLGASTKQLQDDFVRAASSRSGRDVVLNSVATVAKVAQALNTPETKAATQQLFQTLQSVVDFFASDDGRQIISSTSECLTSASEMAASPEASIFLAELATNMLHTLESE 184
BLAST of NO04G01020 vs. NCBI_GenBank
Match: XP_008912480.1 (hypothetical protein PPTG_16751 [Phytophthora parasitica INRA-310] >ETN02097.1 hypothetical protein PPTG_16751 [Phytophthora parasitica INRA-310] >KUF66368.1 hypothetical protein AM587_10010629 [Phytophthora nicotianae] >KUF82567.1 hypothetical protein AM587_10005151 [Phytophthora nicotianae]) HSP 1 Score: 71.2 bits (173), Expect = 7.000e-9 Identity = 48/183 (26.23%), Postives = 92/183 (50.27%), Query Frame = 0 Query: 148 VLSAVARGMLGVSKWTLGSVANQLGG----PFGWGEFMFAWVSDITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARNVIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQE 327 ++ AV V + + VA++L G P ++ + +TP R + L + A ++ + E G +LG + + + D V ++ GR +VL S T K+A+A++TPE AA Q F+ ++ A++ + ++S+ S+ L+ + +A +PE ++ +AE T + H L E Sbjct: 2 IMDAVWWATTKVDESVVNPVASRLAGSVANPAVLSFLLWDRLKTLTPQRARDLTRLLATALSNALGVFGAERGQQLGASTKQLQDDFVRAASSRSGRDVVLNSVATVAKVAQALNTPETKAATQQLFQTLQSVVDFFASDDGRQIISSTSECLTSASEMAASPEASIFLAELATNMLHTLESE 184
BLAST of NO04G01020 vs. NCBI_GenBank
Match: ETP34700.1 (hypothetical protein F442_17012 [Phytophthora parasitica P10297]) HSP 1 Score: 71.2 bits (173), Expect = 7.000e-9 Identity = 48/183 (26.23%), Postives = 92/183 (50.27%), Query Frame = 0 Query: 148 VLSAVARGMLGVSKWTLGSVANQLGG----PFGWGEFMFAWVSDITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARNVIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQE 327 ++ AV V + + VA++L G P ++ + +TP R + L + A ++ + E G +LG + + + D V ++ GR +VL S T K+A+A++TPE AA Q F+ ++ A++ + ++S+ S+ L+ + +A +PE ++ +AE T + H L E Sbjct: 2 IMDAVWWATTKVDESVVNPVASRLAGSVANPAVLSFLLWDRLKTLTPQRARDLTRLLATALSNALGVFGAERGQQLGASTKQLQDDFVRAASSRSGRDVVLNSVATVAKVAQALNTPETKAATQQLFQTLQSVVDFFASDDGRQIISSTSECLTSASEMAASPEASIFLAELATNMLHTLESE 184
BLAST of NO04G01020 vs. NCBI_GenBank
Match: OEU07047.1 (hypothetical protein FRACYDRAFT_252149 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 71.2 bits (173), Expect = 7.000e-9 Identity = 48/147 (32.65%), Postives = 78/147 (53.06%), Query Frame = 0 Query: 188 ITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARN----VIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQENAAY 331 ITPPR++ I + H + G + G R+ V+ +E +AP+ R +V+++ T VKLA A+ TPEM + Q LG R ++ LA+ ++K+ + N L LA+ P TTLA+AE +CHAL + + ++ Sbjct: 250 ITPPRVQDWFRIISSSVYHFFTVV-VSGSSLHGMQFRSQVGVVVQSFLEAWSAPESRQVVVDTMATGVKLAGALHTPEMELFLEQVGVLGCRFVDALASGKSKEFIHNSKTLLWNGIELASDPSTTLALAEVTAHLCHALEEVDDSF 395
BLAST of NO04G01020 vs. NCBI_GenBank
Match: XP_009525774.1 (hypothetical protein PHYSODRAFT_544573 [Phytophthora sojae] >EGZ16716.1 hypothetical protein PHYSODRAFT_544573 [Phytophthora sojae]) HSP 1 Score: 68.9 bits (167), Expect = 3.500e-8 Identity = 47/183 (25.68%), Postives = 90/183 (49.18%), Query Frame = 0 Query: 148 VLSAVARGMLGVSKWTLGSVANQLGG----PFGWGEFMFAWVSDITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARNVIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQE 327 ++ AV V + + VA++L G P ++ + +TP R + L + A A+ + E G LG + + + + ++ GR +VL T K+A+A++TPE AA Q F+ ++ A++ + ++S+MS+ L+ +A +PE+++ +AE T + H L E Sbjct: 2 IVDAVRWATTKVDESVVNPVASRLAGSVANPAVLSFLLWDRLKTLTPQRARDLTRLLATALANALGVFGAERGQRLGASTKQLQEDFARAASSRSGRDVVLNGVATVAKVAQALNTPETKAATQQLFQTLQSVVDFFASDDGRRIISSMSECLTSATEMAASPESSIFLAELATNLLHTLESE 184
BLAST of NO04G01020 vs. NCBI_GenBank
Match: POM68353.1 (Hypothetical protein PHPALM_15499 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 68.9 bits (167), Expect = 3.500e-8 Identity = 42/160 (26.25%), Postives = 82/160 (51.25%), Query Frame = 0 Query: 167 VANQLGGPFGWGEFMFAWVSDITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARNVIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQE 327 +A+ + P ++ + +TP R + L + A A+ + E G +LG + + + V ++ GR +VL S T K+A+A++TPE AA Q F+ ++ A++ + ++S+ S+ L+ + +A +PE ++ +AE T + H L E Sbjct: 25 LADSVANPAVLSFLLWDRLKTLTPQRARDLTRLVATALANALGVFGAERGQQLGASTKQLQQDFVRAASSRSGRDVVLNSVATVAKVAQALNTPETKAATQQLFQTLQSVVDFFASDDGRRIISSSSECLTSASEMAASPEASIFLAELATNLLHTLESE 184
BLAST of NO04G01020 vs. NCBI_GenBank
Match: OQS06597.1 (hypothetical protein THRCLA_01374 [Thraustotheca clavata]) HSP 1 Score: 66.6 bits (161), Expect = 1.700e-7 Identity = 43/164 (26.22%), Postives = 84/164 (51.22%), Query Frame = 0 Query: 165 GSVANQLGGPFGWGEFMFAWVSDITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARNVIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQENA 329 GS+AN P+ ++ + + TP R + ++ + A ++ + ++ E + + + D + A P+G+ LV + T K ++A++TPE AA Q K +++LAT Q ++ + ++ S L +A +PE+T+ + E T +CH L +NA Sbjct: 47 GSIAN----PYVLSSKIWDTLKEATPQRARDVSRLISLAISNSALILSSDNTIEWSQSTKALRDHTLAMAATPQGQILVQDCIATVAKTSQALNTPETKAATKQFTKAIQSWIQMLATPQGMQVIDDFGNWASYLTDIAASPESTIFLLEVATNLCHVLTSDNA 206
BLAST of NO04G01020 vs. NCBI_GenBank
Match: XP_002899890.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY60517.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 66.2 bits (160), Expect = 2.200e-7 Identity = 45/183 (24.59%), Postives = 90/183 (49.18%), Query Frame = 0 Query: 148 VLSAVARGMLGVSKWTLGSVANQLGG----PFGWGEFMFAWVSDITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARNVIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQE 327 ++ AV V + + VA++L G P ++ + +TP R + L + A ++ + E G + G + + + + V ++ GR +VL S T K+A+A++TPE AA Q F+ ++ A++ + ++S+ + L+ + +A +PE ++ +AE T + H L E Sbjct: 2 IMDAVRWATNKVDESVVNPVASRLAGSVVNPAVLSFLLWDRLKSLTPQRARDLTRLLATALSNALGVFGAERGTQFGDSTKQLQEDFVRAASSRSGRDVVLNSVATVAKVAQALNTPETKAATQQLFQTLQSVIDFFASDDGRRIISSTGECLASASEMAASPEASIFLAELATNLLHTLESE 184
BLAST of NO04G01020 vs. NCBI_GenBank
Match: OWZ09855.1 (hypothetical protein PHMEG_00017374, partial [Phytophthora megakarya]) HSP 1 Score: 65.5 bits (158), Expect = 3.800e-7 Identity = 41/160 (25.62%), Postives = 78/160 (48.75%), Query Frame = 0 Query: 167 VANQLGGPFGWGEFMFAWVSDITPPRLKRLATIFWDAGAHITKLAYTEGGNELGFAARNVIDGLVETVAAPKGRALVLESGMTFVKLAEAVDTPEMHAAITQGFKLGTRGLEVLATEQAKDLMSNMSDFLSRLARLANAPETTLAVAEFVTVVCHALAQE 327 +A+ + P ++ + +TP R + L + A A+ + E G +L + V ++ GR +VL S T K+A+A++TPE AA Q F+ ++ A+E + ++S+ + L+ + +A +PE ++ +AE T + H L E Sbjct: 19 LADSVANPAVLSFLLWDRLKTLTPQRARDLTRLLATALANALSVFSAERGQQLRTSTNQVQQAFARAASSRSGRDVVLNSVATVAKVAQALNTPETKAATQQLFQTLQSVVDFFASEDGRRIISSTGECLTSASDMAASPEASIFLAELATNLLHTLESE 178 The following BLAST results are available for this feature:
BLAST of NO04G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01020 ID=NO04G01020|Name=NO04G01020|organism=Nannochloropsis oceanica|type=gene|length=1274bpback to top protein sequence of NO04G01020.1 >NO04G01020.1-protein ID=NO04G01020.1-protein|Name=NO04G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=349bpback to top Synonyms
Publications
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