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Properties
| Property Name | Value |
|---|
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr4 | genome | chr4:321540..326372 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Homology
BLAST of NO04G01000 vs. NCBI_GenBank
Match: EWM28453.1 (hypothetical protein Naga_100636g1 [Nannochloropsis gaditana]) HSP 1 Score: 148.7 bits (374), Expect = 1.400e-31 Identity = 91/199 (45.73%), Postives = 108/199 (54.27%), Query Frame = 0
Query: 107 LRPGTQVYIADLQGPGLVMGREADGQYVLQCHVAGRPLPVLVRRPASQLYVRNPAGNGQVILADSTSSPVSASPAHAPSLSVPRGDARPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASYRLFRDPRTGKTYAIYNTPPRXXXXXXXXXXXXXXXXXXXXXPISQNRVRLSPTRDELRDFLLSRQGMSGPM 306
L PGT V+IADLQGPGLVMGR+ADGQYVLQCHVAG+ +PVLVRRPASQLYVR P + ++P S+S +P S R ++ R SYR+ DP+TGKTYAIY+T PR P++Q RVRLSP R+ELRDF LSRQG GPM
Sbjct: 102 LPPGTHVHIADLQGPGLVMGRDADGQYVLQCHVAGQSMPVLVRRPASQLYVRGPDDTRP---DRAPTTPSSSSFPSSPITSATRPES---------------------ASLDQAQRREEAGGEGRGSYRVLHDPKTGKTYAIYHTSPR-----------PRFQGSTGSRPLAQKRVRLSPGREELRDFFLSRQGPGGPM 265
BLAST of NO04G01000 vs. NCBI_GenBank
Match: EWM28455.1 (hypothetical protein Naga_100710g3 [Nannochloropsis gaditana]) HSP 1 Score: 124.8 bits (312), Expect = 2.200e-24 Identity = 64/98 (65.31%), Postives = 74/98 (75.51%), Query Frame = 0
Query: 1321 RYPIQPQSASIPFMITRDMKRELIEEMNYSRKEVDAMKPEYALDLIQRGIKKAPKPRRVAPYPPPEFVPVLDRGEEREERGEGAMEEDGEVIEVRSSS 1419
+YP+QP AS+PFM+TRDM+R LIE+MNYSRKEVD MKPE A +IQ G+KKAPKPRR+APYPP + PVLD REE G GEVIEV SSS
Sbjct: 59 KYPLQPPGASLPFMVTRDMRRALIEDMNYSRKEVDRMKPEQAWAVIQSGVKKAPKPRRLAPYPPLDLAPVLD----REEEGGEXXXXXGEVIEVSSSS 152
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01000 ID=NO04G01000|Name=NO04G01000|organism=Nannochloropsis oceanica|type=gene|length=4833bp
ATGCGTCACCGCACGTTTCCCTGGCCAAGCCCTGTATTTTTACTCCTTCT
CGCCGGGCCCACCCTTCTGCTCGTTCTGGAACAAAAGCATGCCAGAGGAC
CATCGTCCGTCGTCCAAGCCTTCCAACTTCCGACCCCTTCCCATCTTTTC
TCCTCGCCCGCACGACGTCTCATCACTACAGAGAATCGAAAGAGTCGCAC
TGCCCTCCAGTCCTCGCCTTTTGAGGACTTCTTCCTCGTAAACGATCCTT
TCCTTCGTGTCAACCCCACCCCCCGTAGTCCCCCTTTCCCCCCCTCCTCC
CCTTCTGCTGAAGGAGGATTGCGTCCTGGTACGCAGGTGTATATTGCAGA
CTTGCAAGGACCTGGTTTGGTGATGGGAAGGGAAGCAGATGGGCAATATG
TGTTGCAATGCCACGTGGCAGGGAGGCCCCTTCCAGTGTTGGTCCGTCGA
CCTGCGAGTCAACTGTACGTCCGGAACCCGGCGGGGAATGGACAAGTAAT
TCTCGCCGACAGTACTTCTTCTCCTGTTTCTGCTTCTCCTGCTCATGCTC
CCTCTTTGTCAGTACCTCGAGGGGATGCGCGGCCGCAACAACAACAACAA
CAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAAGAGGAGGAAGAGGA
GGGGGAGGGCGATGCATCGGAGGAGCAGGAAGATGATGAGAGAGCAAGCT
ATCGCCTTTTTCGAGACCCTCGAACAGGGAAAACCTACGCCATCTACAAT
ACCCCCCCTCGTCCCCGCCCTCGTCTCTCCCCCTTTTCCTCCTCCTCCTC
CTCCTCCTCCCCTTCTTCTTCTCGTCCGATTTCTCAAAACCGTGTTCGTC
TTTCCCCTACTCGTGACGAGCTTCGCGACTTCCTATTGTCTCGCCAAGGA
ATGAGCGGTCCTATGCCTTCTCCGTCCTCCGTTTCCTCCCCTTCGTTTCG
GCAGCAGCAGCAGCAACAGCGGCAACAGCGGCAACAGCGGCAACAGCAAC
GAAACCTTCCTGGCCGGGACTTTGTCGCCCAGACCTTCGAAGACCTCCTC
CATGCCTCCTCCTCCTTCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
TTCCCCCCTCTCTCACCCCTCCGCTTCGAGCAACACCAATAAGGACCACT
ACAACGCCCTGTGCCGGCTGGCCGAAGCCTACTCCCTCTCCGGATCCCCG
GAGATCGCGTCTTATTATTTGAACCAGGCGTTAGAATCAGACCCAGAGAG
ATTCATGGAGGATTCGGTGATGTTGAGTCGCCTGGGCGAGGCTCAGCATC
GCATGGGCCGGGTGCATGAGGCCAGAAAAATGTACCAAAGGGTACTGGAG
CTGGAGGAACGGAAGAAGATGGAGGAGGAGGTGGGGATGGGGGGGAAGCA
GGGCGGGAAGGTGGCGTTGAAGTACGGGATTGCGTTGCACGACCAAGGGG
ATCCGGCGGGGGCGTGTGGGTGGTACTACCGCGCCATTCAGTTAGgtggg
ttaggtgggcgggaaggagggagggagggagtgagtgagtgagtgaggga
gggagggtagtatttatcacgcagatacgtaagggctcaccaccttcatt
gttgcctctccctccctccttctctctctccctctctatctagACCCCGA
GAACAAGGCGGCTTTCAACAATCTCGGTGTCGCTCTTCAGGAAACCGGAA
ACGCGGCCCCTGCCCTTCAAGCCTACAAAAAAGCCCTTGAGATCGACGGA
CTCTATGCACCCGCATTGCAGAACCTGGCGGCACTCACCGTCCGTCAGgt
tcgtcttgtcactccctccccttctaccctttctctttgcctccctcccc
tctccatgccctcttgataaccctctcactcacatgcccctccctccctc
cccttctaccctttctctttgcctccctcccctctccatgccctcttgat
aaccctctcactcacatgcccctccctccctccccttctaccctttctct
ttgcctccctcccctctccatgccctcttgataaccctctcactcacatg
cccctccctccctccctccctccctcctcccctctttccttccacagGGA
CGATTCAAGCTCGCCCTTGCCTGCATTCAGCGCGCCCTCCTGCTCTCTCC
CAACGACGCGGCCACGCAACGGCTAGCCAGTGAGGTGATGACGCGGATGT
CGCAAGGTCGCTCCTGGCCCCTGCTTCCCTCCGTCGTGGACGTGGGAGTG
AGTGAGGGAGGGAGGGAGGGAAAGGACAGGGTGAGGGAGGAGAGGCTAAG
GGAGTATGAACGGCAGTTGCGGGAGGCGCAGGAAGAGGAAGAAGAGGAAA
ATGGAAAGGAACAAGAGGAGGAGGAGGAGGAAGAGATTGGGACAGAAGAT
GCGACGACGAAGGCGGAATCTTGGAATGAGCTGCTGGAACAGGCCTGGAA
AGTGAGGGAGGAGATGGAGAAACACCGGGGGGTCCAAGCGCAGAGGGAAG
TGAGCGATCTTCAGAAAGTGCGACGCGCACAAGTGGAGGCCGCGAAGGAG
GGACGGAAGGAGGTCGAACGATCCATCAAGGGGTTGTTCGACGTTGACCT
AACCGAGGAGGAGAGGGCGGCTTATGCCAAGCCCCCCTTTGCTCATCCCA
ATTTTGGCGTGGGGGGGAGGGAGGGAGGGGGAGAGGGGGGGGAGGAGGAG
GCATTCGAGGAAGAGAAGGAGTACTGGCGACAACCTGCACAGGAGCTGGT
GACTATCCCTCATGTCGATCCCCCTCGGAGGGCGGAGGGAAGGAGGGAAG
GGAATGGGAAGAGAGGAGAGGTTGGACATTCCTCTTCATTCGGTGGTGAG
AAATCAACGCTTTCCTCTCCATCCTCCGGCCGCTCACTGAGCAAAGAGGC
AGAGGCGCGTGCGAGGGACGAGGAAGAGGAGGAGCGACGCCGAGTCGCTG
AGTGGGAGGAGAGGGAGAGAATGGAGGAGGAGGAGTTGCAGCCGATGATG
CCTAAAGAAGGGTCAGGCTTGTCGTGGGATGACCTGCTGGAGGCGCTGGC
GACGGCGTCGAGGAAGAGTCACCAGGAGGAGCAGGAAGAGGAGGAGACGG
TCGAATCCTTTGCGACTCAATCCCAGCAGCAGCAGCAACTGCAGCAGCAG
CAACGACAGCCGCAACAGCAGCAGCAACGGCAGCAGCAACGACAGCAGCA
ACGACAGCAGCAACAACAACAACAACCACCACAACAACAACAACAACAAC
TACAACAACAACCGCAACAACAACAACAACCACCACTACAACAACAATCA
CAAACTGAACAGCAAGCAGACACCAACCGCGACGCTGATACCTCGGCCGC
TGCCCTGCGGCGAGCCCAACTGGCCGCTAGTCGCGCAGCCTGGCAAGACC
TACAAAAGGCTTCTTGGGTACAAAATGCAAAGGAAAAAGAGATGCTCTCA
CAGCAGCTACAGGCACGAAGGGCAGAGGAGGAAAAGCTTGCTCGGCGGCA
GGCGGAGTTGCAGGCTAGGAGGGAGGCGGAAGAGGAGGCACGGAGAGAGG
AAGAGGAGATGCGGCGGAGGGCGTTGGAGGAGGAGGCGGCGAGGACAAGA
GAGATGGTGGAGAAGGGGAGGGCGGAGGAGGAAAAGAGGAGGGAGGAGAG
GGAGAGATTGAGGAGGCAATTGGAGGAGGACCGGGCATTGGCAGTTAGGA
GGGCATGGGAAGAGCTGATGCGTTCCACAGCAGAAGACGAGGCGGACGCA
AAAGCAGAGACAGACGCAGCAACAGAGGCAGCAGCAGAAACACAAGCAGG
GGTAGTACGAAAGGCGGCAGAGGAGAAGCGGAGGCGAAGCCGAGAGGAGG
AGAAGGAGGGGAAGGCAGCGTTGGCGTTGCGTCTGAAGAAGGAGAGAGAC
GAGGCGGTTAAAAAAGCGATGGAGAGCGAACGACAGTTGTGGGAGGTAGA
AAGAGCCAGAGCCGTCCTACGGGAGAAACAGGCGCGAGCCCAGGAGGATG
CAGAGAGGCTGGCTGCCGAGAAGGAGGAGATGGAGAGAGCGCGGGCTTGG
GAACTCTACCGGCGGCAACAGCGACAGCAGCAGGCGCAGGAATGGAAGAA
ATATCAGGAGGGGCTTCAAGCCAAAAGGAGGAGGGTAGAGAGGGGGTTGG
GCCTGGCGGGAGAGGAGAAGAGAGGGAAGGAGGGAGGGGTGGATGCAAGG
GGGCAGGAACGGTTGAGACAACGGCAAGTTCAAAAAGTTATGCAGCAGCA
GCAGGAGCAGCAGGAACAGCAGCAGGAGCAACAGCAGCAGGAGGAGGAGG
AGGAGGAGGAGGGAAACGAGGCAGTACGCGGGTGGGATGGGAATGTATTG
AGCGACAAAGAAGAGGTGGAGGAAGGGAGGGAGGGAGGGGAGGAGGGAGG
AGGGTTGAGGTACCCTATCCAGCCCCAGAGCGCGTCAATACCTTTCATGA
TCACGAGGGACATGAAGAGGGAGTTGATCGAAGAGATGAATTACAGCAGG
AAGGAGGTGGATGCGATGAAGCCTGAGTATGCCCTTGATCTGATCCAGAG
AGGTATTAAGAAAGCACCTAAGCCGAGGCGGGTTGCACCTTACCCTCCGC
CGGAGTTTGTGCCGGTGTTAGATAGAGGGGAAGAGAGGGAGGAGAGGGGG
GAGGGAGCGATGGAGGAAGATGGGGAGGTGATTGAGGTGAGGTCATCATC
TTTACCATAGTCTCAATTAGAGGGGGTCAAGCCACCCACACCTTCGAGGG
ACGGGCATTATCCTCCTCTTGAGGGCACGGGTCTATGCCGGTGGTGGATG
GCAGGGGGAAAAGGAGGAAGAGAGGAAGGGAGG back to topprotein sequence of NO04G01000.1 >NO04G01000.1-protein ID=NO04G01000.1-protein|Name=NO04G01000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1421bp
MRHRTFPWPSPVFLLLLAGPTLLLVLEQKHARGPSSVVQAFQLPTPSHLF
SSPARRLITTENRKSRTALQSSPFEDFFLVNDPFLRVNPTPRSPPFPPSS
PSAEGGLRPGTQVYIADLQGPGLVMGREADGQYVLQCHVAGRPLPVLVRR
PASQLYVRNPAGNGQVILADSTSSPVSASPAHAPSLSVPRGDARPQQQQQ
QQQQQQQQQQQQEEEEEGEGDASEEQEDDERASYRLFRDPRTGKTYAIYN
TPPRPRPRLSPFSSSSSSSSPSSSRPISQNRVRLSPTRDELRDFLLSRQG
MSGPMPSPSSVSSPSFRQQQQQQRQQRQQRQQQRNLPGRDFVAQTFEDLL
HASSSFPSSSSSSSSSSSPLSHPSASSNTNKDHYNALCRLAEAYSLSGSP
EIASYYLNQALESDPERFMEDSVMLSRLGEAQHRMGRVHEARKMYQRVLE
LEERKKMEEEVGMGGKQGGKVALKYGIALHDQGDPAGACGWYYRAIQLDP
ENKAAFNNLGVALQETGNAAPALQAYKKALEIDGLYAPALQNLAALTVRQ
GRFKLALACIQRALLLSPNDAATQRLASEVMTRMSQGRSWPLLPSVVDVG
VSEGGREGKDRVREERLREYERQLREAQEEEEEENGKEQEEEEEEEIGTE
DATTKAESWNELLEQAWKVREEMEKHRGVQAQREVSDLQKVRRAQVEAAK
EGRKEVERSIKGLFDVDLTEEERAAYAKPPFAHPNFGVGGREGGGEGGEE
EAFEEEKEYWRQPAQELVTIPHVDPPRRAEGRREGNGKRGEVGHSSSFGG
EKSTLSSPSSGRSLSKEAEARARDEEEEERRRVAEWEERERMEEEELQPM
MPKEGSGLSWDDLLEALATASRKSHQEEQEEEETVESFATQSQQQQQLQQ
QQRQPQQQQQRQQQRQQQRQQQQQQQPPQQQQQQLQQQPQQQQQPPLQQQ
SQTEQQADTNRDADTSAAALRRAQLAASRAAWQDLQKASWVQNAKEKEML
SQQLQARRAEEEKLARRQAELQARREAEEEARREEEEMRRRALEEEAART
REMVEKGRAEEEKRREERERLRRQLEEDRALAVRRAWEELMRSTAEDEAD
AKAETDAATEAAAETQAGVVRKAAEEKRRRSREEEKEGKAALALRLKKER
DEAVKKAMESERQLWEVERARAVLREKQARAQEDAERLAAEKEEMERARA
WELYRRQQRQQQAQEWKKYQEGLQAKRRRVERGLGLAGEEKRGKEGGVDA
RGQERLRQRQVQKVMQQQQEQQEQQQEQQQQEEEEEEEGNEAVRGWDGNV
LSDKEEVEEGREGGEEGGGLRYPIQPQSASIPFMITRDMKRELIEEMNYS
RKEVDAMKPEYALDLIQRGIKKAPKPRRVAPYPPPEFVPVLDRGEEREER
GEGAMEEDGEVIEVRSSSLP* back to top
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