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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr4 | genome | chr4:311795..315572 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016874 | ligase activity |
| GO:0016740 | transferase activity |
| GO:0004842 | ubiquitin-protein transferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016567 | protein ubiquitination |
Homology
BLAST of NO04G00970 vs. NCBI_GenBank
Match: XP_004357184.1 (o ubiquitin protein ligase E3A [Acanthamoeba castellanii str. Neff] >ELR25029.1 o ubiquitin protein ligase E3A [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 67.8 bits (164), Expect = 1.800e-7 Identity = 44/142 (30.99%), Postives = 75/142 (52.82%), Query Frame = 0
Query: 539 LALPRSLRQYVLLLESPESCDPSWQRYVAPSLFAAIVLLPSLAKDLLKEWMAGGERGGGREGRGAITRLGRWVAALQQYITIRCLEEQSPRAYA-----DVKTAVRVMAILYKANQLREGGMEGGVVPLADFYNGAVNEALE 676
L+ P SLRQ V++L+SP D + + + L AI LLP +KD+L W + + + R+ ++ +QQYIT+R L +P A++ + VRV+ +LY AN+ + + +FYN A+NE+++
Sbjct: 165 LSQPESLRQVVIVLQSPMLLDLDYHKSILGPLIRAIPLLPERSKDVLVSWWS----------QMSAERMRTFLGIVQQYITLRIL--AAPHAFSLHNDDYIPAGVRVLQLLYTANE----RITKDKLDYPEFYNDAINESID 290
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00970 ID=NO04G00970|Name=NO04G00970|organism=Nannochloropsis oceanica|type=gene|length=3778bp
AGTTCGTTAGTTTTGATCACACCGACACAATGGTTCGTCAGTCGAGGTCT
CGGTGTTCGGAGTGAAAAAGAGAAAAGCCAACGCTCTGGGCACGTACTCG
AGCACGCTCGACGGTGGCTGGCTTGAGTACAGCACAGAGAGAACTCTCCT
CTTCTCAGATGGCTTGGTTACCTCGGAGGGAGGCCGGAGGCCGTGGTCGC
GTGGGTAGCCGCGGCGCGCCGATAACCTCCCAACGGATCGACGAGGATGC
TTTTACTTGCATCATCGTTTTCAATCACGCCACTATAAACACACTCAGGA
ATTCTTACCCCACAGCTATTTTGCGCTGTATCTACAGCATCTTGGTTGCC
TCCGCTACCTCTTTGGGTCGCTCCCTCGACGCATTTGGCTCCGCAAAAAC
GAATTCTCTTCACCCCACCTTCTTTCCCAACTCGTACGACACACCAAGCT
TTATCACCCGAAGCATTATGGCGGGCAGTCCAGAAGACGCCCGTCGTGCA
ATGGAACTCACATTCAAGGCCCATTTTTCGGATTTGGTTGCAGCCGGAGT
ACCTCGCAATGTCGCCGCTGCCCGAGCACTGCAGGCGACCCAGCAAGAGG
CGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGGAGG
AGGAGGAGGAGGAGAAGGACTTGGGACGACACGGATGGAGGAAGAAGAGA
TGCAAGTGGAGGAGATGGGTACGTCCTCATCTTATTCCTCTATTTCTACA
TCGGAAGCAGCCGTAGCGATGAGGGAGGAGGGGGAGGAGGGACGGAAGGA
GGGGAAGGGAACGGGAGTGGATGGTGAGGAGGTGAAGGAGGAAGAAGATG
GAGAAGATTCGAGCGACGACAATGAGGAGGAGGACGGGGAGGATGGCATG
AGTGTCGATGGCGAGAAGGAGGAAGAGGAGGAGGATGGGGGGGACAACAA
AGAGTGTCTGTCGGTAGAGACGTTGAAGAGTCTCGTGGAAGTGGCGCAGG
AATCAGGGGACTACACGGAGTTAAAGGCCTTCTTGACGTCTGGATTTTCG
CATTCCAAGATCTTGAACGCGAGCTTCATCCCTCGTAAGAAAGTGGGGGT
GTCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGATGGCGGAAGGAAAGA
AGGGGGAAGGGGAAGAGAGTATGGAGATGGACGATGAGGCCATGCCACTA
CCACCCACCTTGTCTTCCGAGGAGGGAGGGAGGGAGGAAGGAAGAGGGGG
CCCGCCGTTGGCAATTACGTTGGACCATGAGGCGGTGGTGCAGTTTTACA
CTGCACTGGTGGGGGCGGACGAAGTCTACCGTCAGCGAGGACGGAAGAAG
GAGGGGCAGAAGGAGGAAGGGAACGAGGAAGAGGAGGAGGAAGGATTGAT
GGACGTGGTTCGCAATGCGCAGGCGAAGCTGGCGGCGCAATTGCATGCTG
AGGCTACTGCTACTGCTGCTGCTACTTCCTCCTCGTCGTCAGGGAGGGGT
GGTGAAGGAGAAGGGAACAAGGGGAAACATGTTCGTGCCACAGCTAAGAA
ACGTCCGCGCAAGGAGGAGGAGGTGGGAGGAGGAGCGGGTGCAGCTTCTG
CCCTTTCCTCCTCCTCCTCATCCCTCCCTCCTCCCACCGATACCTCCCTT
CCCCCCCCTCCCCCCCAAACTCGAAAGAAACGGTTGGCCGCCAAACGGGC
CAGGGCAGCCCGTCGAGCGCACCTCGCCCTCCCTCGGTCCCTCCGTCAGT
ACGTCCTTCTCCTTGAATCCCCCGAGAGCTGCGACCCTTCCTGGCAACGC
TACGTGGCCCCCTCCCTCTTCGCGGCCATCGTCCTCCTTCCCTCCCTCGC
GAAGGACCTGCTCAAGGAGTGGATGGCGGGGGGAGAGAGGGGGGGAGGGA
GGGAGGGAAGAGGGGCAATAACGCGGCTGGGCAGGTGGGTGGCGGCCCTG
CAGCAATACATAACCATCCGGTGCCTGGAGGAGCAATCTCCCCGGGCCTA
CGCGGACGTGAAGACTGCTGTCAGGGTCATGGCCATACTGTACAAGGCGA
ACCAACTGAGGGAGGGAGGCATGGAGGGGGGGGTCGTGCCGTTGGCTGAT
TTCTACAATGGAGgtgcgtgatggtgtggagaggaccagggggggataga
gagggggcggtaggggggagaggtgctgggtatccaacagagagctgagt
gagagagagagtcaccatattcatttatctgtccccccgatctgtctccc
tcccgcccttgcgccctccctgcgaccacagCCGTTAACGAGGCCTTGGA
ACGCACCCGCGATGAGGACGAGGACGAAGAGAAGGACGAGGAGGAGGAGG
ACGAGGAGGCGGCACGCATCGTGCGAATCCAACGTCGGCGATTTTTCCAC
ATTGGCCTTGAGTTTGAGACATGGCGCCAAGACAGAGAGCGGCTTCGACG
GCGGGGGAGGGAGGGAGGGAGGGAAGGGGCATTCGAACCCCGGACTATTG
TCTTTTATCCGTTTTTGTTGACGCCGGCGGTGAAAGCGCGGTTGCTGCAC
TTCGACTGCGTGGAGCAGATGCGGAGGTGGGGAAGGAAGAAAGGAAGGGA
GGGAACGGGCGAGGCGAAGGAGGAAGTGGGTGTGAGGTGTTTGTGTGTTT
GCTCGTCTCTCCGTCCCTCCATACATTCCCCCTCCCTCAATTCAAAATGC
TCAGGGCGGATGAAGGAGATAAATAACACGCACGCGTCACGGGACAATAT
TAACACCACCATTTTACACTAGCACCACTATACATGATCATCACCATTAT
ATACTAACACCATTGATCATAGAAAGCTCATAACCAGAAACTTTCCTTCC
TTTCCTCTCTTCCTCCCTCGCCGCTCCCTCGCCCTCACAGAGAGATCGAA
GAGGAGATGGATTACGCGATGGCCGGCGGGGTCATTCGCCCTTACCTCGT
GCTCAAGGTGGAGAGGAATGACATCGTGGGCTCCACGTTGCATGCCCTGG
CTCTGTACGAGGGATTCGAGTACAAGAAGAAGCTCAAGGTCCAATTTCGC
GGGGAGGACGGCGTGGACGAGGGAGGGGTGCAGAAAGgtaagggaggcag
ggagggtatatacatgtatacttgtaaatgtatatatatgtgtatctttg
tgtgggtgtgtgggaatgggtatatgtatacatataaatgtgtaaatatg
catatctgtgtgtgggtgggaatgtgtgggggggggaggagcagaactgt
gcctctccccccttccataccccctccaggaccctcctcccgtacgcacg
ctttccccgggtcacatattccctccctccctccctccctccctccctcc
ctctcagAATTTTTCCAAGTCCTCCTCCGGCAACTCCTCGATCCTGCCTA
TGGAATGTTCCTCCCCGAGCCCCTAGGCCCAAATCAACCAGGCGATGTAG
GCGATGgtacgtccctcccatctttcctccctcctttcctcgcgcccctt
ctgcattcctgcccacctttccaaaatcatttcttttcctccctcccttc
ctccctccccagCCCGCCTCCTCTGGTTCAACCCTGATTCCTTCAATGAC
CCGCGTGAGTTTGAGCTCGTCGGCATATTGCTCGGCCTTGCCCTCTACAA
CGCCGTCCTCCTCGATCTCCACTTCCCCCCCATTCTCTACAAAAAACTTA
TGCTACCGCCCTCCAGCCCCTCCTCTTC back to topprotein sequence of NO04G00970.1 >NO04G00970.1-protein ID=NO04G00970.1-protein|Name=NO04G00970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=832bp
MAWLPRREAGGRGRVGSRGAPITSQRIDEDAFTCIIVFNHATINTLRNSY
PTAILRCIYSILVASATSLGRSLDAFGSAKTNSLHPTFFPNSYDTPSFIT
RSIMAGSPEDARRAMELTFKAHFSDLVAAGVPRNVAAARALQATQQEAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAARGGGGGGEGLGTTRMEEEEMQV
EEMGTSSSYSSISTSEAAVAMREEGEEGRKEGKGTGVDGEEVKEEEDGED
SSDDNEEEDGEDGMSVDGEKEEEEEDGGDNKECLSVETLKSLVEVAQESG
DYTELKAFLTSGFSHSKILNASFIPRKKVGVSGGGGGGGGGEMAEGKKGE
GEESMEMDDEAMPLPPTLSSEEGGREEGRGGPPLAITLDHEAVVQFYTAL
VGADEVYRQRGRKKEGQKEEGNEEEEEEGLMDVVRNAQAKLAAQLHAEAT
ATAAATSSSSSGRGGEGEGNKGKHVRATAKKRPRKEEEVGGGAGAASALS
SSSSSLPPPTDTSLPPPPPQTRKKRLAAKRARAARRAHLALPRSLRQYVL
LLESPESCDPSWQRYVAPSLFAAIVLLPSLAKDLLKEWMAGGERGGGREG
RGAITRLGRWVAALQQYITIRCLEEQSPRAYADVKTAVRVMAILYKANQL
REGGMEGGVVPLADFYNGAVNEALERTRDEDEDEEKDEEEEDEEAARIVR
IQRRRFFHIGLEFETWRQDRERLRRRGREGGREGAFEPRTIVFYPFLLTP
AVKARLLHFDCVEQMRRWGRKKGREGTGEAKEEVGVRCLCVCSSLRPSIH
SPSLNSKCSGRMKEINNTHASRDNINTTILH* back to top
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