NO04G00960, NO04G00960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00960 vs. NCBI_GenBank
Match: EWM28460.1 (gcn5-related n-acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 317.0 bits (811), Expect = 7.000e-83 Identity = 166/248 (66.94%), Postives = 185/248 (74.60%), Query Frame = 0 Query: 69 SPCLPTSSSFTYSSSIPTRTRLCVRPANKADLRRVATMQVAEYGGDGILFFWHYLQELDRLQTSYWVEPVRHTMLVLVDDSSSSPSSLSPSSSSFPFSPLSVALRALDNFFLGDPRIVGFVDLDARERRVDKTTPDPYLSDLIVDASRRGQGLGKALMLEAEAEAERWGFPAVYLKVRKNNARGYGLYASLGYQVLWEWPGEGVWLMRKWVMDEGEEAREEAEKKEREDCQMMVGTVMMPCMNWVEGE 317 +PCLP S RL VRPANKADLRRVATMQV EYGG GIL+ WHYLQELDRLQTSYW++P HTMLV VD S+PS+ F P S ++ D F+ GDPRIVGFVDLDAR+RRVDKTTP PYLSDLIV+ SRRGQGLG+ LM AE EA RWG+PAVYLKVRK NARG+GLYASLGY+VLWEWPGE VW+MRKWV+D EE R+EA KKERE + MVG VMMP M W E Sbjct: 95 APCLPQS-------------RLSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVD---STPSA---------FRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRKWVVD--EEDRKEAVKKEREGWEGMVGAVMMPFMTWAGEE 315
BLAST of NO04G00960 vs. NCBI_GenBank
Match: CBN77487.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.8 bits (203), Expect = 2.200e-12 Identity = 57/175 (32.57%), Postives = 79/175 (45.14%), Query Frame = 0 Query: 92 VRPANKADLRRVATMQVAEYGGDGILFFWHYLQELDRLQTS---YWVEPVRHTMLVLVDDSSSSPSSLSPSSSSFPFSPLSVALRALDNFFLGDPRIVGFVDLDARERRVDKTTPDPYLSDLIVDASRRGQGLGKALMLEAEAEAERWGFPAVYLKVRKNNARGYGLYASLGYQV 264 ++PA +LR V+ + VAE+ G I + L EL+RLQ + Y + RH ML+ + D + GFVD+D RE+R +T PYLSDL V R G+G L+ E WG+ +YLKVR+ N LY +LGY V Sbjct: 101 IKPAKFHNLRAVSRLLVAEFYGSTIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATS--------------------------------VEDGSLAGFVDIDGREKRPGQTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVV 243
BLAST of NO04G00960 vs. NCBI_GenBank
Match: WP_013191315.1 (N-acetyltransferase [Trichormus azollae] >ADI64298.1 GCN5-related N-acetyltransferase ['Nostoc azollae' 0708]) HSP 1 Score: 69.3 bits (168), Expect = 2.500e-8 Identity = 55/184 (29.89%), Postives = 82/184 (44.57%), Query Frame = 0 Query: 82 SSIPTRTRLCVRPANKADLRRVATMQVAEYGGDGILFFWHYLQELDRLQTSYWVEPVRHTMLVLVDDSSSSPSSLSPSSSSFPFSPLSVALRALDNFFLGDPRIVGFVDLDAR--ERRVDKTTPDPYLSDLIVDASRRGQGLGKALMLEAEAEAERWGFPAVYLKVRKNNARGYGLYASLGYQV 264 +SIP ++ +R A ADL +A + + L+ W + L RL E +RH + + P V L A+DN G +++G V+L R + + PYLS+L VD R GLG +L+ E + WGF +YL V +NN + LY LGY+V Sbjct: 17 TSIPDSGQIQIRVATSADLYSIAQIIAESFHSRKGLWGWAF--PLFRLGI---YEDLRHRLASRI--------------------PHQVCLVAIDNSISGTNQVLGTVELSVRFSDSWANFHRSFPYLSNLAVDPKYRRYGLGSSLLTSCEQVCQDWGFHDLYLHVLENNHQARKLYFKLGYRV 175
BLAST of NO04G00960 vs. NCBI_GenBank
Match: EJK60911.1 (hypothetical protein THAOC_18671 [Thalassiosira oceanica]) HSP 1 Score: 66.6 bits (161), Expect = 1.600e-7 Identity = 59/186 (31.72%), Postives = 85/186 (45.70%), Query Frame = 0 Query: 92 VRPANKADLRRVATMQVAEY--GGDGILFFWHYLQELDRLQTSYWVEPV-RHTMLVLVDDSSSSPSSLSPSSSSFPFSPLSVALRALDNFFLGDPRIVGFVDLDAR--ERRVDKTT----------PDPYLSDLIVDASRRGQGLGKALMLEAEAEAERWGFPAVYLKVRKNNARGYGLYASLGYQ 263 VR A+ DL RVA + + G + +L YL ELDRLQ ++ + + RH L + D S+ GD +VGF D+D R ERR + P PYLSDL V++S R +G+ K LM +AE A G+ +YL V +N +Y+ +GY+ Sbjct: 170 VRSASYDDLPRVAELMTDCFYPGLNAMLRPVRYLMELDRLQGNFPYDDIDRHYYLCVFDTST------------------------------GD-CLVGFCDIDGRILERRQGLVSALSPLGNVRRPQPYLSDLAVNSSWRRKGVAKTLMSKAERLAREMGYNELYLGVNGDNHLALQMYSKMGYE 324 The following BLAST results are available for this feature:
BLAST of NO04G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00960 ID=NO04G00960|Name=NO04G00960|organism=Nannochloropsis oceanica|type=gene|length=1005bpback to top protein sequence of NO04G00960.1 >NO04G00960.1-protein ID=NO04G00960.1-protein|Name=NO04G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=335bpback to top Synonyms
Publications
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