NO04G00690, NO04G00690 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00690 vs. NCBI_GenBank
Match: EWM28494.1 (replication protein a 32 kda [Nannochloropsis gaditana]) HSP 1 Score: 352.4 bits (903), Expect = 1.300e-93 Identity = 193/298 (64.77%), Postives = 225/298 (75.50%), Query Frame = 0 Query: 1 MSYGGYEYGAPTDAYGXXXXXXFMPGHGD--FQGGAMGFGSPDAGAGGGGKVSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPG-AVGVMGMGLGNMAGGMMGGYGQKMXXXXVG---GGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293 MSYGG+EYGAP D YG XXXX MPG GD K SKEQKTLLPLTVHQ+LNAGQDEPDAPTF VDGCDLHQVKI+GQ+L+IVETA MRAYK+DDGTG+LSC VF EQDE+EYAQERRSYCQKG+Y+ VVGQ+R+YQG+RH+SVHDMRVVKDGNEIT+HLLE IWVHCQNTKGRM KPG AV G KM G GG +++++AVL+AFME++ GD GA+LATV+R+LS + ++ Q+QQA +FLAQEG+LYTT DENHYK T Sbjct: 1 MSYGGFEYGAPADTYG-GXXXXXMPGVGDXXXXXXXXXXXXXXXXXXXXXKPSKEQKTLLPLTVHQVLNAGQDEPDAPTFKVDGCDLHQVKIIGQILDIVETAVMRAYKIDDGTGILSCHVFSEQDESEYAQERRSYCQKGAYVGVVGQVRDYQGKRHVSVHDMRVVKDGNEITYHLLEAIWVHCQNTKGRMLKPGAAVXXXXXXXXXXXXXXXXGVSGKMMMAGPGGMNGGTNDVHEAVLNAFMEYSMGDNGAELATVVRALSGK-LSANQIQQATEFLAQEGRLYTTLDENHYKPT 296
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_009040954.1 (hypothetical protein AURANDRAFT_32654, partial [Aureococcus anophagefferens] >EGB04397.1 hypothetical protein AURANDRAFT_32654, partial [Aureococcus anophagefferens]) HSP 1 Score: 139.0 bits (349), Expect = 2.300e-29 Identity = 81/245 (33.06%), Postives = 138/245 (56.33%), Query Frame = 0 Query: 51 SKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDET-EYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPG--AVGVMGMGLGNMAGGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293 ++++++L+P+T+ Q+L+A + + F VDG +++QV++VG +L + T Y ++D TG+L C ++V Q+E +ER GSY+ V+G L+EY G+ ++S +D+R ++D NEITHH LE I+ H + T G A G N +GG + GGM+ V + + GD G ++ +V SL+ + QV+ V+FL+ EG LY+T D++H+K+T Sbjct: 1 ARDKQSLIPMTIKQVLSATKAAGEDDGFAVDGREVNQVRVVGNILRQDKKETKHVYTIEDQTGMLECTMWVNQEEAGATVEERAEKMVNGSYVCVIGGLKEYNGKLNVSAYDVRPIEDFNEITHHYLEAIYSHAKQTNAIKTGGGGAAAPASAFGAFNPSGGRVSADAMDTSG---DGGMTADQTKVFNFYTTEGTGDEGCNVNSVASSLA---MDLNQVKHIVEFLSSEGHLYSTIDDDHHKST 239
BLAST of NO04G00690 vs. NCBI_GenBank
Match: POM64269.1 (Replication protein A 32 kDa subunit [Phytophthora palmivora var. palmivora]) HSP 1 Score: 138.7 bits (348), Expect = 3.000e-29 Identity = 88/287 (30.66%), Postives = 150/287 (52.26%), Query Frame = 0 Query: 29 DFQGGAMGFGSPDAGAGGGGKVSKE--------------QKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVM---------GMGLGNMAGGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293 ++ GG +G+ D G GGGG +S + +++LP+++ QL D+ T +DG ++ V+++G + + +T +++DDG+G C+ FV D+ + ++ + ++GSY+RVVG+LR +QG+ LS ++ V+D NE+THHLLEVI+VHC NTKG + A M G GG+G M + S +A+LD + D G + + L + +T Q++ A+++L EG +Y+T DE+H+K T Sbjct: 2 NYGGGYEAYGNDDYGNGGGGFMSSQPSGSQSTPTKRSGAAQSILPVSIKQLQTVNADD---DTLRLDGQEVSTVRLIGLLTNLTPHSTSLRFQLDDGSGAFDCQYFVTADDADASEGEMNRLREGSYVRVVGKLRTFQGKASLSCFNVTPVEDMNELTHHLLEVIYVHCYNTKGPLNNGKADVTMTSFNTPTKAAPGGNQWNQPSAGGFGGSMDYGMMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIFADLRGQ-MTEPQLRSALNYLTSEGHVYSTIDEDHFKRT 283
BLAST of NO04G00690 vs. NCBI_GenBank
Match: EJK75519.1 (hypothetical protein THAOC_02754, partial [Thalassiosira oceanica]) HSP 1 Score: 136.7 bits (343), Expect = 1.100e-28 Identity = 89/265 (33.58%), Postives = 144/265 (54.34%), Query Frame = 0 Query: 36 GFGSPDAGAGGGGKVSK---EQKTLLPLTVHQLLNAGQDEPDAPTFTV-DGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVE--QDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVMGMGLGNMA-GGMMGGYGQKMXXXXVGGGM---SNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYK 291 GF + G G + + +TL+P+T + A D D T+ DG LH +KIVG V E +T +++DGTG++ +V++ D + +Q R+ C++ SYIRV+GQ+RE+ G R + +DMR V D NE+T+H LEV + K + + G MG G+GNMA GG G G K + GG ++LN V++ + G+ GA + ++ +S + + ++ AV +L+ EG +Y+T DE+HY+ Sbjct: 2 GFDNDSRGGSSDGNKPRRNYDDQTLIPVTCRMIAQALGDPSDQGDLTLKDGRSLHMIKIVGAVREADLRSTNLFVQLEDGTGLMQVKVWINDGDDPSAISQLRQEACREHSYIRVIGQVREFDGSRQIVANDMRPVTDSNEVTYHFLEVAQSY---EKMKKMQSGQASGMGFGIGNMASGGPPQGGGIKAAGQGLDGGKGAGNSLNDEVVNV-IRGLGGESGAHVNEIVSQVSLKGFSEMDIRDAVTYLSNEGHIYSTIDEDHYQ 262
BLAST of NO04G00690 vs. NCBI_GenBank
Match: OQR92724.1 (replication protein A 32 kDa subunit [Achlya hypogyna]) HSP 1 Score: 132.9 bits (333), Expect = 1.600e-27 Identity = 78/255 (30.59%), Postives = 135/255 (52.94%), Query Frame = 0 Query: 48 GKVSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVMGMGLGNMAGGMM-------GGYGQK---MXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293 G S++ +TL P+TV QL+ A + E T VDG +++ V+IVG + ++ + +T + V+DGTG++S R+F++ D+ Y Q+ + G Y+ VG LR + G+ L+ + V++ N++THH LE I+ H +N G + G G GG GG+GQ+ G S+ Q + + + D+G + + + L+ R + Q+++A+ +L EG +Y+T DENH+K T Sbjct: 28 GGNSRDNQTLTPVTVRQLMAAIRAEGGDDTVHVDGKEVNNVEIVGLLTDVSQNSTNITFSVNDGTGLISARLFLQADDDHYQQQLVESLRDGVYVAAVGNLRTFGGKTSLTCFSVTPVENFNQVTHHFLECIYTHLRNVHGALNSAPTAMKQDPGFGAQTGGYNSFGMSTGGGFGQQSTYQNFAATDSGFSDPGQQAILDILGASSLDMGLSIDQIKQQLNGR-LNDAQLREALGYLTNEGHIYSTIDENHFKRT 281
BLAST of NO04G00690 vs. NCBI_GenBank
Match: OWZ24691.1 (DAN Replication protein [Phytophthora megakarya]) HSP 1 Score: 132.9 bits (333), Expect = 1.600e-27 Identity = 84/262 (32.06%), Postives = 141/262 (53.82%), Query Frame = 0 Query: 40 PDAGAGGGGKVSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGA-VGVMGMGLGNMA--GG------MMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293 P K S +++LP+++ QL D+ T +DG ++ V++VG + + +T +++DDG+G C+ FV D+ + ++ + ++GSY+RVVG+LR +QG+ +S ++ V+D NE+THHLLEVI+VHC NTKG + A V + A GG GG+G M + S +A+LD + D G + + L + +T QQ++ A+++L EG +Y+T DE+H+K T Sbjct: 5 PSGSQSTPAKRSGAAQSILPVSIRQLQTVNADD---DTLRLDGQEVSTVRLVGLLTNLTPHSTSLRFQLDDGSGAFDCQYFVTADDADASEGEMNRLREGSYVRVVGKLRTFQGKASVSCFNVTPVEDMNELTHHLLEVIYVHCYNTKGAVNHGNADVHMTSFNTPTKAAPGGNQWNQPSAGGFGGGMDYGVMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIFSDLRGQ-MTEQQLRSALNYLTSEGHVYSTIDEDHFKRT 261
BLAST of NO04G00690 vs. NCBI_GenBank
Match: ETP50911.1 (hypothetical protein F442_03871 [Phytophthora parasitica P10297]) HSP 1 Score: 132.1 bits (331), Expect = 2.800e-27 Identity = 100/298 (33.56%), Postives = 154/298 (51.68%), Query Frame = 0 Query: 8 YGAPTDAYGXXXXXXFMPGHGDFQGGAMGFGS--PDAGAGGGGKVSKEQKTLLPLTVHQL--LNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVM--------GMGLGNMA-GGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293 YG +AY G+ D+ GG GF S P K S +++LP+T+ QL LN G D+ +DG ++ V++VG + + +T +++DDG+G C+ FV DE + R +GSY+RVVG+LR +QG+ LS ++ V+D NE+THHLLEVI+VHC NTKG + A +M G N G GG+G M + S +A+LD + D G + + L+ + + QQ++ A+++L EG +Y+T DE+H+K T Sbjct: 3 YGGGYEAY----------GNDDYSGGG-GFMSSQPSGSQSTPTKRSGGAQSILPVTIKQLQSLNTGDDD----AVRLDGQEVSTVRLVGLLTNLTPHSTSLRFQLDDGSGAFDCQYFVNADEDASEGDLR----EGSYVRVVGKLRSFQGKSSLSCFNVVPVQDMNELTHHLLEVIYVHCYNTKGPLNDGKADVMMTSFNTPTKGANQWNQPNAGATGGFGGGMDYGMMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIYADLNGQ-MNEQQLRSALNYLTSEGHVYSTIDEDHFKRT 279
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_024578329.1 (replication protein a 32 kda subunit [Plasmopara halstedii] >CEG41960.1 replication protein a 32 kda subunit [Plasmopara halstedii]) HSP 1 Score: 132.1 bits (331), Expect = 2.800e-27 Identity = 94/289 (32.53%), Postives = 152/289 (52.60%), Query Frame = 0 Query: 29 DFQGGAMGFGSPDAGAGGGGKVSKE--------------QKTLLPLTVHQL--LNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVMGMGLGNMAGGMMGGYGQKMXXXXVGGGM---------SNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293 ++ GG +G+ D G GGG +S + +++ P+TV QL LN G D+ +DG +L V++VG + + +T +++DDG+G C+ FV DE + ++GSY+RVVG+LR +QG+ LS + ++D NE+THHLLEVI+VHC NTKG + G+ + M N + + Q GGGM S +A+LD + + G + + +L ++ IT QQ++ A+++L EG +Y+T DE+H+K T Sbjct: 2 NYGGGYEAYGNDDYGGNGGGFMSSQPSGSQATPNKRGLGAQSIFPVTVKQLQSLNTGDDD-----LRLDGQELSTVRLVGLLTNLTPQSTSVRFQLDDGSGAFDCQYFVNADE----DTSEAVLREGSYVRVVGKLRSFQGKTSLSCFSVGTIEDMNELTHHLLEVIYVHCYNTKGPLH--GSKADVTMTSFNTPTKAVNHWNQPATEIH-GGGMEDGLMDSTFSPEQKAILDV-LGTCSSNCGLKIDQIYTNLKSQ-ITEQQLRSALNYLMNEGHVYSTIDEDHFKRT 276
BLAST of NO04G00690 vs. NCBI_GenBank
Match: GAY04798.1 (Hypothetical protein PINS_012614 [Pythium insidiosum]) HSP 1 Score: 132.1 bits (331), Expect = 2.800e-27 Identity = 87/275 (31.64%), Postives = 138/275 (50.18%), Query Frame = 0 Query: 50 VSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAV-------------------------------GVMGMG-LGNMAGGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293 ++++ +TL+P+TV QLLN + + + VDG ++ V++VG + +V +T +++DDGTGV+ R+F+ D+ E A+E + + G Y+R VG LR++Q + L+ + + D NEITHH LE I+VHC +TKG +Q G M G LG+ G MG M S +A+LD + D G + + L R IT Q++ A+++L EG +Y+T DENH+K T Sbjct: 47 IARDAQTLVPVTVRQLLNRSETD---DSIRVDGHEMSNVRVVGLLGNVVPHSTNVNFQLDDGTGVIDGRLFLHGDDLERAEEEIAKLRDGMYVRAVGSLRQFQDRLSLNCFTLTPITDFNEITHHFLETIYVHCYHTKGPLQSSGGAKXXXXXXXXXXXXXXXXXSQLNAFGQPQQSWNQMNSGYLGHSGGAAMGAMDYNME-----SSFSPEQKAILDV-LGTCTSDRGVKIDEIFGQLRGR-ITEDQLRDALNYLTSEGHVYSTIDENHFKRT 311
BLAST of NO04G00690 vs. NCBI_GenBank
Match: GAY02241.1 (Hypothetical protein PINS_010054 [Pythium insidiosum]) HSP 1 Score: 132.1 bits (331), Expect = 2.800e-27 Identity = 87/275 (31.64%), Postives = 138/275 (50.18%), Query Frame = 0 Query: 50 VSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAV-------------------------------GVMGMG-LGNMAGGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293 ++++ +TL+P+TV QLLN + + + VDG ++ V++VG + +V +T +++DDGTGV+ R+F+ D+ E A+E + + G Y+R VG LR++Q + L+ + + D NEITHH LE I+VHC +TKG +Q G M G LG+ G MG M S +A+LD + D G + + L R IT Q++ A+++L EG +Y+T DENH+K T Sbjct: 47 IARDAQTLVPVTVRQLLNRSETD---DSIRVDGHEMSNVRVVGLLGNVVPHSTNVNFQLDDGTGVIDGRLFLHGDDLERAEEEIAKLRDGMYVRAVGSLRQFQDRLSLNCFTLTPITDFNEITHHFLETIYVHCYHTKGPLQSSGGAKAXXXXXXXXXXXXXXXXSQLNAFGQPQQSWNQMNSGYLGHSGGAAMGAMDYNME-----SSFSPEQKAILDV-LGTCTSDRGVKIDEIFGQLRGR-ITEDQLRDALNYLTSEGHVYSTIDENHFKRT 311 The following BLAST results are available for this feature:
BLAST of NO04G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00690 ID=NO04G00690|Name=NO04G00690|organism=Nannochloropsis oceanica|type=gene|length=1223bpback to top protein sequence of NO04G00690.1 >NO04G00690.1-protein ID=NO04G00690.1-protein|Name=NO04G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=293bpback to top Synonyms
Publications
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