NO04G00690, NO04G00690 (gene) Nannochloropsis oceanica

Overview
NameNO04G00690
Unique NameNO04G00690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1223
Alignment locationchr4:240327..241549 -

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Properties
Property NameValue
DescriptionReplication protein a 32 kDa
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:240327..241549 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR036390WH_DNA-bd_sf
IPR004365NA-bd_OB_tRNA
IPR014892RPA_C
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
Homology
BLAST of NO04G00690 vs. NCBI_GenBank
Match: EWM28494.1 (replication protein a 32 kda [Nannochloropsis gaditana])

HSP 1 Score: 352.4 bits (903), Expect = 1.300e-93
Identity = 193/298 (64.77%), Postives = 225/298 (75.50%), Query Frame = 0
Query:    1 MSYGGYEYGAPTDAYGXXXXXXFMPGHGD--FQGGAMGFGSPDAGAGGGGKVSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPG-AVGVMGMGLGNMAGGMMGGYGQKMXXXXVG---GGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            MSYGG+EYGAP D YG  XXXX MPG GD                     K SKEQKTLLPLTVHQ+LNAGQDEPDAPTF VDGCDLHQVKI+GQ+L+IVETA MRAYK+DDGTG+LSC VF EQDE+EYAQERRSYCQKG+Y+ VVGQ+R+YQG+RH+SVHDMRVVKDGNEIT+HLLE IWVHCQNTKGRM KPG AV                G   KM     G   GG +++++AVL+AFME++ GD GA+LATV+R+LS + ++  Q+QQA +FLAQEG+LYTT DENHYK T
Sbjct:    1 MSYGGFEYGAPADTYG-GXXXXXMPGVGDXXXXXXXXXXXXXXXXXXXXXKPSKEQKTLLPLTVHQVLNAGQDEPDAPTFKVDGCDLHQVKIIGQILDIVETAVMRAYKIDDGTGILSCHVFSEQDESEYAQERRSYCQKGAYVGVVGQVRDYQGKRHVSVHDMRVVKDGNEITYHLLEAIWVHCQNTKGRMLKPGAAVXXXXXXXXXXXXXXXXGVSGKMMMAGPGGMNGGTNDVHEAVLNAFMEYSMGDNGAELATVVRALSGK-LSANQIQQATEFLAQEGRLYTTLDENHYKPT 296          
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_009040954.1 (hypothetical protein AURANDRAFT_32654, partial [Aureococcus anophagefferens] >EGB04397.1 hypothetical protein AURANDRAFT_32654, partial [Aureococcus anophagefferens])

HSP 1 Score: 139.0 bits (349), Expect = 2.300e-29
Identity = 81/245 (33.06%), Postives = 138/245 (56.33%), Query Frame = 0
Query:   51 SKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDET-EYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPG--AVGVMGMGLGNMAGGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            ++++++L+P+T+ Q+L+A +   +   F VDG +++QV++VG +L   +  T   Y ++D TG+L C ++V Q+E     +ER      GSY+ V+G L+EY G+ ++S +D+R ++D NEITHH LE I+ H + T       G  A      G  N +GG +             GGM+     V + +     GD G ++ +V  SL+   +   QV+  V+FL+ EG LY+T D++H+K+T
Sbjct:    1 ARDKQSLIPMTIKQVLSATKAAGEDDGFAVDGREVNQVRVVGNILRQDKKETKHVYTIEDQTGMLECTMWVNQEEAGATVEERAEKMVNGSYVCVIGGLKEYNGKLNVSAYDVRPIEDFNEITHHYLEAIYSHAKQTNAIKTGGGGAAAPASAFGAFNPSGGRVSADAMDTSG---DGGMTADQTKVFNFYTTEGTGDEGCNVNSVASSLA---MDLNQVKHIVEFLSSEGHLYSTIDDDHHKST 239          
BLAST of NO04G00690 vs. NCBI_GenBank
Match: POM64269.1 (Replication protein A 32 kDa subunit [Phytophthora palmivora var. palmivora])

HSP 1 Score: 138.7 bits (348), Expect = 3.000e-29
Identity = 88/287 (30.66%), Postives = 150/287 (52.26%), Query Frame = 0
Query:   29 DFQGGAMGFGSPDAGAGGGGKVSKE--------------QKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVM---------GMGLGNMAGGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            ++ GG   +G+ D G GGGG +S +               +++LP+++ QL     D+    T  +DG ++  V+++G +  +   +T   +++DDG+G   C+ FV  D+ + ++   +  ++GSY+RVVG+LR +QG+  LS  ++  V+D NE+THHLLEVI+VHC NTKG +    A   M           G         GG+G  M    +    S   +A+LD  +     D G  +  +   L  + +T  Q++ A+++L  EG +Y+T DE+H+K T
Sbjct:    2 NYGGGYEAYGNDDYGNGGGGFMSSQPSGSQSTPTKRSGAAQSILPVSIKQLQTVNADD---DTLRLDGQEVSTVRLIGLLTNLTPHSTSLRFQLDDGSGAFDCQYFVTADDADASEGEMNRLREGSYVRVVGKLRTFQGKASLSCFNVTPVEDMNELTHHLLEVIYVHCYNTKGPLNNGKADVTMTSFNTPTKAAPGGNQWNQPSAGGFGGSMDYGMMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIFADLRGQ-MTEPQLRSALNYLTSEGHVYSTIDEDHFKRT 283          
BLAST of NO04G00690 vs. NCBI_GenBank
Match: EJK75519.1 (hypothetical protein THAOC_02754, partial [Thalassiosira oceanica])

HSP 1 Score: 136.7 bits (343), Expect = 1.100e-28
Identity = 89/265 (33.58%), Postives = 144/265 (54.34%), Query Frame = 0
Query:   36 GFGSPDAGAGGGGKVSK---EQKTLLPLTVHQLLNAGQDEPDAPTFTV-DGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVE--QDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVMGMGLGNMA-GGMMGGYGQKMXXXXVGGGM---SNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYK 291
            GF +   G    G   +   + +TL+P+T   +  A  D  D    T+ DG  LH +KIVG V E    +T    +++DGTG++  +V++    D +  +Q R+  C++ SYIRV+GQ+RE+ G R +  +DMR V D NE+T+H LEV   +    K +  + G    MG G+GNMA GG   G G K     + GG    ++LN  V++  +    G+ GA +  ++  +S +  +   ++ AV +L+ EG +Y+T DE+HY+
Sbjct:    2 GFDNDSRGGSSDGNKPRRNYDDQTLIPVTCRMIAQALGDPSDQGDLTLKDGRSLHMIKIVGAVREADLRSTNLFVQLEDGTGLMQVKVWINDGDDPSAISQLRQEACREHSYIRVIGQVREFDGSRQIVANDMRPVTDSNEVTYHFLEVAQSY---EKMKKMQSGQASGMGFGIGNMASGGPPQGGGIKAAGQGLDGGKGAGNSLNDEVVNV-IRGLGGESGAHVNEIVSQVSLKGFSEMDIRDAVTYLSNEGHIYSTIDEDHYQ 262          
BLAST of NO04G00690 vs. NCBI_GenBank
Match: OQR92724.1 (replication protein A 32 kDa subunit [Achlya hypogyna])

HSP 1 Score: 132.9 bits (333), Expect = 1.600e-27
Identity = 78/255 (30.59%), Postives = 135/255 (52.94%), Query Frame = 0
Query:   48 GKVSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVMGMGLGNMAGGMM-------GGYGQK---MXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            G  S++ +TL P+TV QL+ A + E    T  VDG +++ V+IVG + ++ + +T   + V+DGTG++S R+F++ D+  Y Q+     + G Y+  VG LR + G+  L+   +  V++ N++THH LE I+ H +N  G +           G G   GG         GG+GQ+           G S+  Q  +   +  +  D+G  +  + + L+ R +   Q+++A+ +L  EG +Y+T DENH+K T
Sbjct:   28 GGNSRDNQTLTPVTVRQLMAAIRAEGGDDTVHVDGKEVNNVEIVGLLTDVSQNSTNITFSVNDGTGLISARLFLQADDDHYQQQLVESLRDGVYVAAVGNLRTFGGKTSLTCFSVTPVENFNQVTHHFLECIYTHLRNVHGALNSAPTAMKQDPGFGAQTGGYNSFGMSTGGGFGQQSTYQNFAATDSGFSDPGQQAILDILGASSLDMGLSIDQIKQQLNGR-LNDAQLREALGYLTNEGHIYSTIDENHFKRT 281          
BLAST of NO04G00690 vs. NCBI_GenBank
Match: OWZ24691.1 (DAN Replication protein [Phytophthora megakarya])

HSP 1 Score: 132.9 bits (333), Expect = 1.600e-27
Identity = 84/262 (32.06%), Postives = 141/262 (53.82%), Query Frame = 0
Query:   40 PDAGAGGGGKVSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGA-VGVMGMGLGNMA--GG------MMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            P        K S   +++LP+++ QL     D+    T  +DG ++  V++VG +  +   +T   +++DDG+G   C+ FV  D+ + ++   +  ++GSY+RVVG+LR +QG+  +S  ++  V+D NE+THHLLEVI+VHC NTKG +    A V +        A  GG        GG+G  M    +    S   +A+LD  +     D G  +  +   L  + +T QQ++ A+++L  EG +Y+T DE+H+K T
Sbjct:    5 PSGSQSTPAKRSGAAQSILPVSIRQLQTVNADD---DTLRLDGQEVSTVRLVGLLTNLTPHSTSLRFQLDDGSGAFDCQYFVTADDADASEGEMNRLREGSYVRVVGKLRTFQGKASVSCFNVTPVEDMNELTHHLLEVIYVHCYNTKGAVNHGNADVHMTSFNTPTKAAPGGNQWNQPSAGGFGGGMDYGVMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIFSDLRGQ-MTEQQLRSALNYLTSEGHVYSTIDEDHFKRT 261          
BLAST of NO04G00690 vs. NCBI_GenBank
Match: ETP50911.1 (hypothetical protein F442_03871 [Phytophthora parasitica P10297])

HSP 1 Score: 132.1 bits (331), Expect = 2.800e-27
Identity = 100/298 (33.56%), Postives = 154/298 (51.68%), Query Frame = 0
Query:    8 YGAPTDAYGXXXXXXFMPGHGDFQGGAMGFGS--PDAGAGGGGKVSKEQKTLLPLTVHQL--LNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVM--------GMGLGNMA-GGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            YG   +AY          G+ D+ GG  GF S  P        K S   +++LP+T+ QL  LN G D+       +DG ++  V++VG +  +   +T   +++DDG+G   C+ FV  DE     + R    +GSY+RVVG+LR +QG+  LS  ++  V+D NE+THHLLEVI+VHC NTKG +    A  +M        G    N    G  GG+G  M    +    S   +A+LD  +     D G  +  +   L+ + +  QQ++ A+++L  EG +Y+T DE+H+K T
Sbjct:    3 YGGGYEAY----------GNDDYSGGG-GFMSSQPSGSQSTPTKRSGGAQSILPVTIKQLQSLNTGDDD----AVRLDGQEVSTVRLVGLLTNLTPHSTSLRFQLDDGSGAFDCQYFVNADEDASEGDLR----EGSYVRVVGKLRSFQGKSSLSCFNVVPVQDMNELTHHLLEVIYVHCYNTKGPLNDGKADVMMTSFNTPTKGANQWNQPNAGATGGFGGGMDYGMMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIYADLNGQ-MNEQQLRSALNYLTSEGHVYSTIDEDHFKRT 279          
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_024578329.1 (replication protein a 32 kda subunit [Plasmopara halstedii] >CEG41960.1 replication protein a 32 kda subunit [Plasmopara halstedii])

HSP 1 Score: 132.1 bits (331), Expect = 2.800e-27
Identity = 94/289 (32.53%), Postives = 152/289 (52.60%), Query Frame = 0
Query:   29 DFQGGAMGFGSPDAGAGGGGKVSKE--------------QKTLLPLTVHQL--LNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVMGMGLGNMAGGMMGGYGQKMXXXXVGGGM---------SNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            ++ GG   +G+ D G  GGG +S +               +++ P+TV QL  LN G D+       +DG +L  V++VG +  +   +T   +++DDG+G   C+ FV  DE        +  ++GSY+RVVG+LR +QG+  LS   +  ++D NE+THHLLEVI+VHC NTKG +   G+   + M   N     +  + Q       GGGM         S   +A+LD  +     + G  +  +  +L ++ IT QQ++ A+++L  EG +Y+T DE+H+K T
Sbjct:    2 NYGGGYEAYGNDDYGGNGGGFMSSQPSGSQATPNKRGLGAQSIFPVTVKQLQSLNTGDDD-----LRLDGQELSTVRLVGLLTNLTPQSTSVRFQLDDGSGAFDCQYFVNADE----DTSEAVLREGSYVRVVGKLRSFQGKTSLSCFSVGTIEDMNELTHHLLEVIYVHCYNTKGPLH--GSKADVTMTSFNTPTKAVNHWNQPATEIH-GGGMEDGLMDSTFSPEQKAILDV-LGTCSSNCGLKIDQIYTNLKSQ-ITEQQLRSALNYLMNEGHVYSTIDEDHFKRT 276          
BLAST of NO04G00690 vs. NCBI_GenBank
Match: GAY04798.1 (Hypothetical protein PINS_012614 [Pythium insidiosum])

HSP 1 Score: 132.1 bits (331), Expect = 2.800e-27
Identity = 87/275 (31.64%), Postives = 138/275 (50.18%), Query Frame = 0
Query:   50 VSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAV-------------------------------GVMGMG-LGNMAGGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            ++++ +TL+P+TV QLLN  + +    +  VDG ++  V++VG +  +V  +T   +++DDGTGV+  R+F+  D+ E A+E  +  + G Y+R VG LR++Q +  L+   +  + D NEITHH LE I+VHC +TKG +Q  G                                   M  G LG+  G  MG     M         S   +A+LD  +     D G  +  +   L  R IT  Q++ A+++L  EG +Y+T DENH+K T
Sbjct:   47 IARDAQTLVPVTVRQLLNRSETD---DSIRVDGHEMSNVRVVGLLGNVVPHSTNVNFQLDDGTGVIDGRLFLHGDDLERAEEEIAKLRDGMYVRAVGSLRQFQDRLSLNCFTLTPITDFNEITHHFLETIYVHCYHTKGPLQSSGGAKXXXXXXXXXXXXXXXXXSQLNAFGQPQQSWNQMNSGYLGHSGGAAMGAMDYNME-----SSFSPEQKAILDV-LGTCTSDRGVKIDEIFGQLRGR-ITEDQLRDALNYLTSEGHVYSTIDENHFKRT 311          
BLAST of NO04G00690 vs. NCBI_GenBank
Match: GAY02241.1 (Hypothetical protein PINS_010054 [Pythium insidiosum])

HSP 1 Score: 132.1 bits (331), Expect = 2.800e-27
Identity = 87/275 (31.64%), Postives = 138/275 (50.18%), Query Frame = 0
Query:   50 VSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAV-------------------------------GVMGMG-LGNMAGGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            ++++ +TL+P+TV QLLN  + +    +  VDG ++  V++VG +  +V  +T   +++DDGTGV+  R+F+  D+ E A+E  +  + G Y+R VG LR++Q +  L+   +  + D NEITHH LE I+VHC +TKG +Q  G                                   M  G LG+  G  MG     M         S   +A+LD  +     D G  +  +   L  R IT  Q++ A+++L  EG +Y+T DENH+K T
Sbjct:   47 IARDAQTLVPVTVRQLLNRSETD---DSIRVDGHEMSNVRVVGLLGNVVPHSTNVNFQLDDGTGVIDGRLFLHGDDLERAEEEIAKLRDGMYVRAVGSLRQFQDRLSLNCFTLTPITDFNEITHHFLETIYVHCYHTKGPLQSSGGAKAXXXXXXXXXXXXXXXXSQLNAFGQPQQSWNQMNSGYLGHSGGAAMGAMDYNME-----SSFSPEQKAILDV-LGTCTSDRGVKIDEIFGQLRGR-ITEDQLRDALNYLTSEGHVYSTIDENHFKRT 311          
The following BLAST results are available for this feature:
BLAST of NO04G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28494.11.300e-9364.77replication protein a 32 kda [Nannochloropsis gadi... [more]
XP_009040954.12.300e-2933.06hypothetical protein AURANDRAFT_32654, partial [Au... [more]
POM64269.13.000e-2930.66Replication protein A 32 kDa subunit [Phytophthora... [more]
EJK75519.11.100e-2833.58hypothetical protein THAOC_02754, partial [Thalass... [more]
OQR92724.11.600e-2730.59replication protein A 32 kDa subunit [Achlya hypog... [more]
OWZ24691.11.600e-2732.06DAN Replication protein [Phytophthora megakarya][more]
ETP50911.12.800e-2733.56hypothetical protein F442_03871 [Phytophthora para... [more]
XP_024578329.12.800e-2732.53replication protein a 32 kda subunit [Plasmopara h... [more]
GAY04798.12.800e-2731.64Hypothetical protein PINS_012614 [Pythium insidios... [more]
GAY02241.12.800e-2731.64Hypothetical protein PINS_010054 [Pythium insidios... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL077nonsL077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR105ngnoR105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009751NSK009751Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00690.1NO04G00690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537853gene_1849Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100058g23gene2098Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00690.1NO04G00690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00690 ID=NO04G00690|Name=NO04G00690|organism=Nannochloropsis oceanica|type=gene|length=1223bp
CCACAGACACTCCCACACACAACACCCTCATGTCCTACGGCGGCTACGAA
TACGGCGCACCCACAGACGCTTACGGTGGCGGGGGCGGGGGAGGCTTCAT
GCCCGGCCATGGCGACTTTCAGGGCGGGGCGATGGGCTTTGGGTCTCCCG
ACGCGGGCGCGGGCGGTGGCGGCAAGGTGAGTAAGGAGCAAAAGACACTG
CTGCCTTTGACGGTCCACCAGCTCTTGAACGCGGGGCAGGACGAGCCGGA
CGCGCCGACATTCACGGTGGATGGATGTGATTTGCACCAGGTGAAGATCG
TGGGGCAAGTGCTGGAGATTGTCGAGACAGCGACGATGCGGGCCTACAAG
GTGGATGACGGGACTGGAGTGTTGAGCTGCCGTGTGTTTGTCGAGCAAGA
CGAGACGGAATATGCACAGGAACGACGGAGCTACTGTCAGAAAGGCTCTT
ACATTCGTGTGGTGGGCCAGCTGAGGGAGTACCAGGGACAGAGGCATTTG
AGTGTGCATGACATGCGGGTAGTGAAGGACGGGAACGAGATTACGCACCA
CTTGCTTGAAGTCATTTGGGTGCACTGTCAGAACACTAAGGGGAGGATGC
AGAAGCCTGGGGCGGTAGGGGTGATGGGAATGGGCTTGGGGAACATGGCG
GGAGGAATGATGGGTGGGTATGGACAGAAGATGATGGGAGGGGGAGTAGG
GGGAGGAATGAGCAACCTGAACCAAGCGGTGTTGGACGCGTTCATGGAGC
ATAATGATGGGGATGTGGGCGCGGATCTGGCGACTGTGATTCGGTCATTA
TCGACGCGGAACATCACCCCGCAGCAGGTGCAGCAGGCGGTTGATTTCCT
GGCGCAGGAGGGGCAGCTGTACACGACGACGGATGAGAACCACTACAAGG
CCACTTAGAGGGAGGGGAGGGGGAGGGCGGAAGGGGCTGCAGTGGTAGTG
GTGGGAGCTTGGTTGGGCGGGAAAAGGTGGGTGAGTGCGAAGAGCAAGCA
GGAAGGCGAAGGCAGGATCCGAGAAGGGGGAGAAGGAAGATGTTTACCTG
TGTCCATGTACGTGTGTGGAGACAGAGGATGGAGGGGGGGAAATGATGTG
AAGGGGAGAGGCAACAAAAAGAAATCATGAACAGTGGTAGCAACCCCAAT
GACAACAGAAGCAGCAACGGCGAAATTCCTGCCAAAAGAAAGATATGAAA
ACCCAAAACGAGAGAAACGGGGG
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protein sequence of NO04G00690.1

>NO04G00690.1-protein ID=NO04G00690.1-protein|Name=NO04G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=293bp
MSYGGYEYGAPTDAYGGGGGGGFMPGHGDFQGGAMGFGSPDAGAGGGGKV
SKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVET
ATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLRE
YQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVMG
MGLGNMAGGMMGGYGQKMMGGGVGGGMSNLNQAVLDAFMEHNDGDVGADL
ATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT*
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Synonyms
Publications