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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr4 | genome | chr4:203271..207163 + |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO04G00580 vs. NCBI_GenBank
Match: EWM28493.1 (hypothetical protein Naga_100058g13 [Nannochloropsis gaditana]) HSP 1 Score: 483.0 bits (1242), Expect = 2.400e-132 Identity = 285/555 (51.35%), Postives = 341/555 (61.44%), Query Frame = 0
Query: 26 TTEQLHASISGPLRKGSILRSFGHNYLAQAFSQQLQILALADGPEVHLYNYAPDKPSVHTGCVLRPPSMVYDTRKGDSCLNNASAAG--RDRQNALHVSWCPDVTLPNNLLAIAWPTFVAVYHMQLSSSPFLSSQVGTDEEGGQARTPQPPAPSVEVVVELLATKLGQVKLGRKPTGLLWHPTAVRPLLCVHDITQVSLVQLPRADGEM-------AHHQNTDSKLAGFKVSSFSPALPGALESVAWSQWGRHLAMCMEGVLRIYGFPHNPNLSLEDLDLSNLRFADTPLRKRVRAIRPAGPHSFAATSDTDLSLIDPRAASPANPAWNGRSSXXXXXXPCLSXXXXXXSPIAGPRLSMRTSSIGSALHLIHFPYTNNNHSYNKNDSNSPISSGNPSSMRRSHIGDISTRLIDIETTTVPHVAMPDLLAVRPVGSGLPGEPSTHALAAIGSHTSDTITLLRLGGSSSSFSLXXXXXXXTVGIHVLFTITLPPLSRPKGLAFVGSRLVLLTGTREGSNVPVSSSSFAQFNTNLSVYSLPPSVYHPTHRPSAPLRYR 572
T + L AS SG LR S LRSFGHNYL+ A +QQL +LA+ DGPE+HLY+Y PD+P CVLRPP D R+G+ S G RD NALHVSWCPD +P+NLLA+ WP+ + +YH++L + S TD E G P + E+ A L QVKLGRKP GLLWHPTA RPLLC++DIT+++L+QL R + E A + F SSF+PALPGALE+ AWS GRHLA+CMEGVLR+Y +P + L L LD+S + DTPLRKRVRA+RPAGPHSFAATSDTDLSLIDPR P RS P GP + + GS LH+IH P + P NP S + I+T +PH+AMPDLLAVR +G+ PGE STHAL A+GSHTSDTITLLRLGG SS XXXXXXX LPPL+RPKGLA +GSRL+LLTGTREG V +SSF QFN +LS+ +LPPSVYHPTH PSAP RYR
Sbjct: 25 TQDLLQASASGSLRTASTLRSFGHNYLSHAINQQLSLLAVPDGPEIHLYHYCPDRPPRPMRCVLRPPPTPLD-RRGEGTFLGGSGKGIDRDHMNALHVSWCPDAAVPSNLLAVTWPSTLVIYHIELEAPSSASFATSTDGEEG------PRLEEASISDEVQAKVLTQVKLGRKPMGLLWHPTAARPLLCLYDITEITLLQLSRGEREFPPPSSPAASSLSAPVDQGPFYTSSFTPALPGALEAAAWSLHGRHLAVCMEGVLRVYDWPTSSVLDLPGLDVSAFTYVDTPLRKRVRAVRPAGPHSFAATSDTDLSLIDPRGGGAPAPFSQSRS------RPSTPRGSPFPPSSPGPTRVLPPACRGS-LHVIHAP---------ARPAPPPPGRLNPFS-----------HPVQIDTGALPHIAMPDLLAVRFLGTSSPGESSTHALVAVGSHTSDTITLLRLGGLSS--XXXXXXXXXXXXXXXXXXXXLPPLTRPKGLALLGSRLLLLTGTREGERVAHIASSFGQFNAHLSIVNLPPSVYHPTHCPSAPRRYR 543
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00580 ID=NO04G00580|Name=NO04G00580|organism=Nannochloropsis oceanica|type=gene|length=3893bp
CTTCCCTTTTTGGATAATGCCAGGTAGCGTTGTTTAAAGCGTCGCTTTGG
TACTTTTTCTCACTCGTGCTGCACAGGGGACGAGTATGCTTCTCCTTGCT
TCTGCTGCTGCTGCTGGCGGTCCTCCCCCACCATCATCACCGCGTATCTG
AATTTCAGTGTACTGCCTACTCAATTTCATCGCGTCGCGGCCAAGCCCCT
TCTGTAGCCTGGGCACGTCACACCATGGACGTGAGGCTAACTGAACTTCG
GTATCGCCTAAGAGTGGCGCCGCGAGACGAAGAATGCTTCAATGTTGCTT
TTTTGCGGTATTTAGGTATTTAATCATGAGATTGGCAAGCAGCACCAGCC
GTTTAACGGGTTGTGCCTTCCCATGGAGGAAGGATATTATATATACTGTA
AACCTCCCCGCCGCTCGCTGCATGTTATCAATCTAGATGATGGGCGATGC
GTCCGTTATATGACTATGGGCCCACTACCCTCCATCATCAAGCACAGCCG
CACTTACAAATAATCCAAGTCGAACATACATCTACACTTGACAGAGAGCT
ATCCAATCGGATCTAGGTCCAGATTTTACAGTGGTCGGGTCCGCGGGGCA
AAAAATTCGTCCAGCAAGTCACCACCATGGCGACCCTACCCACCCCCCTC
GTTGGTGCAAGGAGGATAAATGCCTCGCCCGTCGCGCGCTCATCGACCCC
AACCACGGAGCAGCTTCACGCCAGCATCTCAGGTCCTCTACGGAAGGGCA
GCATCCTTCGTTCGTTCGGCCACAACTATCTAGCGCAAGCCTTTAGCCAG
CAGTTGCAAATTCTCGCCCTGGCGGACGGACCTGAAGTTCATCTTTACAA
CTACGCGCCTGACAAGCCAAGTGTGCACACCGGCTGCGTCCTTCGGCCTC
CATCCATGGTATATGATACTCGGAAGGGTGACAGCTGTCTCAACAACGCC
AGTGCTGCCGGACGCGACCGTCAAAACGCCTTGCACGTAAGCTGGTGTCC
GGATGTGACATTACCCAACAATCTGCTAGCCATCGCATGGCCTACCTTTG
TGGCGGTCTATCACATGCAGCTCTCCTCCAGCCCTTTCTTGTCCTCCCAA
GTCGGCACTGATGAGGAAGGAGGACAGGCCCGCACACCACAGCCACCAGC
ACCATCAGTAGAAGTTGTCGTGGAATTGCTGGCGACTAAGCTTGGACAGG
TTAAGCTCGGCCGCAAACCCACCGGCTTGCTCTGGCATCCAACGGCCGTG
CGACCCCTCTTATGCGTACATGACATCACACAAGTAAGCTTGGTACAGCT
GCCTCGGGCAGACGGCGAGATGGCCCACCACCAGAACACGGACTCTAAGC
TTGCTGGATTCAAAGTCTCGTCTTTTTCCCCCGCTTTGCCTGGTGCCTTG
GAGTCAGTCGCCTGGTCGCAGTGGGGCCGGCACCTCGCCATGTGTATGGA
AGGGGTACTCCGAATCTACGGTTTCCCTCATAATCCGAATCTCTCCCTCG
AAGACCTCGACCTCAGCAACCTGCGCTTTGCTGATACCCCCTTGCGAAAA
CGCGTCCGTGCCATCCGTCCTGCCGGCCCCCACAGCTTCGCCGCCACCAG
CGATACAGACCTCAGCCTGATTGACCCTCGTGCTGCTTCTCCTGCCAACC
CTGCATGGAATGGGCGCAGTAGCAGTAGCAGCAGCAGCAGCCCTTGCTTA
TCCTCCCGACGATCAAGTCCTAGTCCCATCGCTGGCCCTAGGTTATCCAT
GCGCACAAGCTCCATTGGCTCGGCTCTCCACCTCATCCATTTTCCCTATA
CCAACAACAACCATAGCTACAACAAAAATGATAGTAATAGTCCCATCAGT
AGCGGTAACCCGAGTAGCATGAGGAGAAGCCATATCGGAGATATCTCCAC
CCGTCTCATCGACATCGAGACCACCACTGTTCCCCATGTGGCCATGCCCG
ATCTCCTCGCCGTGCGCCCCGTCGGCAGTGGCTTACCAGGCGAGCCCTCC
ACACACGCCTTGGCTGCGATTGGCTCTCACACTTCTGACACCATCACCCT
CCTTCGACTGGGTGGTTCCTCCTCTTCTTTCTCCCTCCCTTCCTCATCCT
CCTCCTCCACGGTCGGAATCCATGTCCTCTTTACCATCACTCTCCCCCCC
TTATCTCGCCCCAAAGGTCTCGCATTCGTCGGCTCGCGCCTCGTCCTTCT
TACAGGAACGAGAGAGGGAAGCAACGTGCCGGTCAGCAGCAGTAGCTTCG
CTCAATTCAATACCAACCTGAGTGTTTATTCGCTTCCCCCCTCCGTATAT
CACCCCACCCACCGTCCTTCCGCTCCCCTGCGCTATCGGGCCTTACCATT
AATCCCCTCATCTTCTGCTGCTGCTACTACTACTGCTACTGCTGCTAGGA
GTAGCAGGCCTGGGAGCGGCAGCAGCGCCCATATGTACACAGGTGCTCCT
CCCCCTTCGCCTTCCTCATGCCTTACGAGTAAGGCAGCAGGCATTACCAC
CACATCTACCGGGGCCGCCAACGCCAGCAGTAGAAGCCGGGCTCCTTCCC
GTCTGTACGCGATACCTTCTGTGCCTGTGATATCTTCTTCTACAACCACT
GCTAGTGCTGCTGCAGCAGGTGCTGCTGTTGCCACCTTCTACCAACACCA
TCATCAGTACCACCATCACCACGATGCCTTTTCTTCCTCTTTGTCTTCTC
GACCTCATTCGCGTATGAGTTCCTTGGGTAATATTTCCCCGGCACCGTCG
TACATATCTGTAGGAGGAGTAGAAGGGGGAGGGATGGAGGGAGGAATGGG
AGAAGAAAGGGGAGGAGGAGGTGGAGGAGGTTCGGAGTTTTTTATTAGGA
ACATGAACCGGCATTTGGCTCCATCGCAGCCGCAGCCCCTCAGTCAGAGG
AGCACACCGGTTTGGGCGGAGCGTTTTGGGGAGGGACGAGGAGGGGAGGG
AGGGGCCACAAAGGGAGCAGCGGGCCGTGGCGGAATGACAACGGGATTTG
GGGCTGAGCATGGCCGTGATTCGTGGCACCAGCAGCAGCACCAACAGCAG
CACCATCGGCAGCCAAAAAGGCATGCACGTTCCTGGGCATCTACCTCCTT
CTCTTCCACTTACGCTACGTCTATTCTTGGTGGCATTGCTGACCGTGCCC
CCTCCCCTGGTCGAAGCACGGGCCTGGGTAAAGGGAAGGGGACGAGCCCC
GCTTCTCGAAGGGGGTCGCCCTCATGCTTCAGCAGCCGTCCATGCTCGGC
GGCTAGGGGGATGAATAGTTTGACCATCACCACGGGAAATCGCACCTGTG
GCAATTCCGACGATGACACTTGCAGGAGAAGCCACGGACCTACTAAGGCC
TTTTCTCGCGCGGGAGGGTCAATGAGCATACAGGTGGTGCAGCAGCAGGA
GGAGGAGCAGCAGGCGCAGCAGCAGGAGGAACATCAGCAGATGGAGCATC
GTTGGGAATCAGCACAGTGCTCGATAGCTGGGAGTGGGCCTGCCTCCTCT
GCATGTGCATCATCATCGGCGTCGCTATCCCGCACAGCACCCGCTTTCTT
TCCTCCTTCCCCTCCACCTACTTCCTCCTACCAATACCAACATCAACACC
GGGCTTCCCCTACCCCTACCTTCCCTCCTCCACTTCATCACCCAGTTTCT
ACCGCCCCGCCTACATTTTTACACTCGGCACCACCAACACCTCCTCCTCC
CCCTCCCCCCCCCCCACTTCTTCGGTTCTCCCTCCTCCTCCTCCTCCCCC
CCCTCCTCCTTCAGTCCCTCCCCCTCCTCTTCCTTCTGCTCCTCCTCCTC
CATTTCTCTCCACCAAAGAAGTGCGAGACACGCCCAGCCCTTGGCGAACT
TTCACCACCACCAATTCCTTCTTTGACCCCTCTCCAGCGATAG back to topprotein sequence of NO04G00580.1 >NO04G00580.1-protein ID=NO04G00580.1-protein|Name=NO04G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1089bp
MATLPTPLVGARRINASPVARSSTPTTEQLHASISGPLRKGSILRSFGHN
YLAQAFSQQLQILALADGPEVHLYNYAPDKPSVHTGCVLRPPSMVYDTRK
GDSCLNNASAAGRDRQNALHVSWCPDVTLPNNLLAIAWPTFVAVYHMQLS
SSPFLSSQVGTDEEGGQARTPQPPAPSVEVVVELLATKLGQVKLGRKPTG
LLWHPTAVRPLLCVHDITQVSLVQLPRADGEMAHHQNTDSKLAGFKVSSF
SPALPGALESVAWSQWGRHLAMCMEGVLRIYGFPHNPNLSLEDLDLSNLR
FADTPLRKRVRAIRPAGPHSFAATSDTDLSLIDPRAASPANPAWNGRSSS
SSSSSPCLSSRRSSPSPIAGPRLSMRTSSIGSALHLIHFPYTNNNHSYNK
NDSNSPISSGNPSSMRRSHIGDISTRLIDIETTTVPHVAMPDLLAVRPVG
SGLPGEPSTHALAAIGSHTSDTITLLRLGGSSSSFSLPSSSSSSTVGIHV
LFTITLPPLSRPKGLAFVGSRLVLLTGTREGSNVPVSSSSFAQFNTNLSV
YSLPPSVYHPTHRPSAPLRYRALPLIPSSSAAATTTATAARSSRPGSGSS
AHMYTGAPPPSPSSCLTSKAAGITTTSTGAANASSRSRAPSRLYAIPSVP
VISSSTTTASAAAAGAAVATFYQHHHQYHHHHDAFSSSLSSRPHSRMSSL
GNISPAPSYISVGGVEGGGMEGGMGEERGGGGGGGSEFFIRNMNRHLAPS
QPQPLSQRSTPVWAERFGEGRGGEGGATKGAAGRGGMTTGFGAEHGRDSW
HQQQHQQQHHRQPKRHARSWASTSFSSTYATSILGGIADRAPSPGRSTGL
GKGKGTSPASRRGSPSCFSSRPCSAARGMNSLTITTGNRTCGNSDDDTCR
RSHGPTKAFSRAGGSMSIQVVQQQEEEQQAQQQEEHQQMEHRWESAQCSI
AGSGPASSACASSSASLSRTAPAFFPPSPPPTSSYQYQHQHRASPTPTFP
PPLHHPVSTAPPTFLHSAPPTPPPPPPPPPLLRFSLLLLLPPLLLQSLPL
LFLLLLLLHFSPPKKCETRPALGELSPPPIPSLTPLQR* back to top
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