NO04G00490, NO04G00490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00490 vs. NCBI_GenBank
Match: EWM28503.1 (31 kda chloroplastic [Nannochloropsis gaditana]) HSP 1 Score: 349.4 bits (895), Expect = 1.200e-92 Identity = 169/205 (82.44%), Postives = 183/205 (89.27%), Query Frame = 0 Query: 108 TAAAPGTVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQMAQAPKGGGAAAVTPGK-KPPGCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFVDYETGAPKASYKAPNGRQWSKVQGK 312 +AAA GTVYVEGISY+ATEDDL+RFFQDKGCGKVKEVR+PRWQDSGRPRGYAHIEFKK +E V KAL+L+G MMGRYLTVQ AQAPK G P K KPPGCDTVFVKNLPYN TED VR+AFTFCGKI+T+RLA+WQHTQQQKGFCY+QFEKENAAEIAVKKQG IQVGGRKVFVDYETGAPKASY+AP+GRQWSK Q K Sbjct: 89 SAAAAGTVYVEGISYEATEDDLVRFFQDKGCGKVKEVRLPRWQDSGRPRGYAHIEFKK-TDEGVAKALSLSGARMMGRYLTVQRAQAPKSLGVGGSLPLKDKPPGCDTVFVKNLPYNTTEDAVREAFTFCGKIKTVRLAVWQHTQQQKGFCYVQFEKENAAEIAVKKQGAIQVGGRKVFVDYETGAPKASYRAPDGRQWSKAQKK 292
BLAST of NO04G00490 vs. NCBI_GenBank
Match: XP_012204864.1 (hypothetical protein SPRG_09824 [Saprolegnia parasitica CBS 223.65] >KDO24434.1 hypothetical protein SPRG_09824 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 191.8 bits (486), Expect = 3.300e-45 Identity = 104/207 (50.24%), Postives = 137/207 (66.18%), Query Frame = 0 Query: 114 TVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQMAQAPKGGGAAAVTPGKKP---PGCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFVDYETGAPKASYKAPNGRQWSKV-QGKGETAR 317 TVYVEGISY A E L+ F CG VKEVRMPR+QDSG+PRGYAHI F +++ KALA++G MM RYL+V+ A+ P+ A +T K GC TVFVK LPY IT+ V++AF CG I ++RL +W HT+ KGF Y++FE E A A KK G +++G R V V+ +TGAPKAS++ G+ W+KV +GK A+ Sbjct: 79 TVYVEGISYDADESSLVSHF--SACGAVKEVRMPRYQDSGKPRGYAHIVF--DSDKAAKKALAMDGQYMMKRYLSVRPAETPR-TLEAVLTKSKSTKAIKGCRTVFVKQLPYEITDAEVKEAFESCGTIISVRLPVWNHTKNSKGFGYVEFETEAEAVAATKKSG-MKIGNRMVLVELDTGAPKASFRTTTGQYWNKVEEGKASLAK 279
BLAST of NO04G00490 vs. NCBI_GenBank
Match: XP_008610978.1 (hypothetical protein SDRG_06944 [Saprolegnia diclina VS20] >EQC35661.1 hypothetical protein SDRG_06944 [Saprolegnia diclina VS20]) HSP 1 Score: 191.4 bits (485), Expect = 4.300e-45 Identity = 105/207 (50.72%), Postives = 137/207 (66.18%), Query Frame = 0 Query: 114 TVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQMAQAPKGGGAAAVTPGKKP---PGCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFVDYETGAPKASYKAPNGRQWSKV-QGKGETAR 317 TVYVEGISY A E L+ F CG VKEVRMPR+QDSG+PRGYAHI F +++ KALA++G MM RYL+V+ A+ P+ A +T K GC TVFVK LPY IT+ V++AF CG I ++RL +W HT+ KGF Y++FE E A A KK G ++VG R V V+ +TGAPKAS++ G+ W+KV +GK A+ Sbjct: 78 TVYVEGISYDADESALVSHF--SACGAVKEVRMPRYQDSGKPRGYAHIVF--DSDKAAKKALAMDGQYMMKRYLSVRPAETPR-TLEAVMTKSKSTKAIKGCRTVFVKQLPYEITDAEVKEAFESCGTIISVRLPVWNHTKNSKGFGYVEFETEAEAVAATKKSG-MKVGNRMVLVELDTGAPKASFRTTTGQYWNKVEEGKASLAK 278
BLAST of NO04G00490 vs. NCBI_GenBank
Match: XP_009843298.1 (hypothetical protein H257_16542 [Aphanomyces astaci] >ETV67132.1 hypothetical protein H257_16542 [Aphanomyces astaci]) HSP 1 Score: 191.4 bits (485), Expect = 4.300e-45 Identity = 102/211 (48.34%), Postives = 139/211 (65.88%), Query Frame = 0 Query: 109 AAAPGTVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQMAQAPKGGGAAAVTPG--KKPPGCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFVDYETGAPKASYKAPNGRQWSK-VQGKGETAR 317 A TVYVEGISY A E L+ F D CG VKEVR+PR+QDSG+PRGYAH+ F +++V KAL L+G MM RYLTV+ A+ P+G A + K GC TV++K LPY + EDTV+ A CG I ++RL +W HT++ KGF Y++F E +A A K+ G +++G R V +D +TGAPKAS++ NG+ W+K +GK A+ Sbjct: 73 AKTQATVYVEGISYDADESALVTHFAD--CGTVKEVRLPRYQDSGKPRGYAHVVF--DSDKAVSKALELDGKYMMKRYLTVRPAETPRGIDQAVQSRKHVKVTKGCRTVYIKQLPYEVDEDTVKTALASCGVIVSVRLPMWGHTKKLKGFGYVEFADEASAVNAAKRSG-MKIGNRMVLIDLDTGAPKASFRQTNGQYWNKGEEGKASLAK 278
BLAST of NO04G00490 vs. NCBI_GenBank
Match: XP_008864278.1 (hypothetical protein H310_02522 [Aphanomyces invadans] >ETW06203.1 hypothetical protein H310_02522 [Aphanomyces invadans]) HSP 1 Score: 190.7 bits (483), Expect = 7.300e-45 Identity = 100/206 (48.54%), Postives = 138/206 (66.99%), Query Frame = 0 Query: 114 TVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQMAQAPKGGGAAAVTPG--KKPPGCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFVDYETGAPKASYKAPNGRQWSK-VQGKGETAR 317 TVYVEGISY A E ++ F + CG VKEVR+PR+QDSG+PRGYAH+ F +++ KALAL+G MM RYLTV+ A+ P+G A K GC TV++K LPY+I E+TV+ A CG I ++RL +W HT++ KGF Y++F E +A A K+ G +++G R V +D +TGAPKAS++ NG+ WSK +GK A+ Sbjct: 73 TVYVEGISYDADESAIVSHFAE--CGAVKEVRLPRYQDSGKPRGYAHVVFDT--DKAAAKALALDGKYMMKRYLTVKPAEIPRGIEQAVQNRKHIKATKGCRTVYIKQLPYDIDEETVKSALESCGAIASVRLPMWGHTKKLKGFGYVEFSDEASAAKAAKRSG-MKIGNRMVLIDLDTGAPKASFRQTNGQYWSKGEEGKASLAK 273
BLAST of NO04G00490 vs. NCBI_GenBank
Match: OQR94555.1 (hypothetical protein THRCLA_08155 [Thraustotheca clavata]) HSP 1 Score: 190.7 bits (483), Expect = 7.300e-45 Identity = 102/205 (49.76%), Postives = 135/205 (65.85%), Query Frame = 0 Query: 114 TVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQMAQAPKGGGAAAVTPGKKPP--GCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFVDYETGAPKASYKAPNGRQWSKVQGKGETAR 317 TVYVEGISY A E L+ F CG VKEVR+PR+QDSG+PRGYAHI F +++ KAL+L+G MM RYL+V+ A+ P+ A P P GC TVFVK LPY ITED ++ AF CG I ++RL +W HT+ KGF Y++FE E +A A KK G +++G R V V+ +TGAPK+S++ G+ W+ KGE A+ Sbjct: 71 TVYVEGISYDADESALVSHF--SSCGTVKEVRLPRYQDSGKPRGYAHIVFDT--DKAAKKALSLDGQYMMKRYLSVRPAETPRTLEAVLSKPKNTKPIKGCRTVFVKQLPYEITEDEIKHAFDSCGTIISVRLPLWNHTKNSKGFGYVEFENEASAVAATKKTG-MKIGTRMVIVELDTGAPKSSFRTTTGQYWN----KGEEAK 266
BLAST of NO04G00490 vs. NCBI_GenBank
Match: OQR81108.1 (hypothetical protein ACHHYP_16746 [Achlya hypogyna]) HSP 1 Score: 190.3 bits (482), Expect = 9.600e-45 Identity = 108/217 (49.77%), Postives = 141/217 (64.98%), Query Frame = 0 Query: 114 TVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQMAQAPKGGGA--AAVTPGKKPPGCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFVDYETGAPKASYKAPNGRQWSKV-QGKGETAR--GGGGHRPPK 326 TVYVEGISY A E L F CG VKEVR+PR+QDSG+PRGYAHI F+ +++ KAL+L+G MM RYL+V+ A+AP+ A + K GC TVFVK LPY ITED V+ AF CG I ++RL +W HT+ KGF Y++FE E A A KK G +++G R V V+ +TGAPKAS++ G+ W+KV +GK A+ G + PK Sbjct: 78 TVYVEGISYDADESALATHF--SSCGSVKEVRLPRYQDSGKPRGYAHIVFET--DKAAKKALSLDGKYMMKRYLSVRPAEAPRTLEAVMSKAKNTKAIKGCRTVFVKQLPYEITEDEVKTAFESCGSIISVRLPVWNHTKNSKGFGYVEFETEAEAVAATKKTG-MKIGNRMVLVELDTGAPKASFRTATGQYWNKVEEGKTSLAKRMADKGKKRPK 289
BLAST of NO04G00490 vs. NCBI_GenBank
Match: CBJ30311.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 189.5 bits (480), Expect = 1.600e-44 Identity = 99/217 (45.62%), Postives = 129/217 (59.45%), Query Frame = 0 Query: 114 TVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQM---------AQAPKGGGA----AAVTPGKKPPGCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFVDYETGAPKASYKAPNGRQWSKVQGKGETARG 318 TVYVEGI + E D+ FF KGCGK+ +VRMPRWQDSGRPRGYAH+ F G A +G + GRYLTVQ QAP+ A ++P GC TVFVKNLPY++ ED V +A CG+I ++RLA+W HT++ KGF Y++F E AE V+ Q + +GGR + VD+ETGAPK S++ +G Q K +G Sbjct: 130 TVYVEGIPWTCDESDVREFF--KGCGKITDVRMPRWQDSGRPRGYAHVAF--AGSSGARAAFGRDGQYLNGRYLTVQQITVESNNHALQAPQEPATEKARRANRKAEQPTGCRTVFVKNLPYDVDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQNLSIGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKG 342
BLAST of NO04G00490 vs. NCBI_GenBank
Match: GAX98850.1 (Hypothetical protein PINS_006688 [Pythium insidiosum]) HSP 1 Score: 179.9 bits (455), Expect = 1.300e-41 Identity = 96/199 (48.24%), Postives = 131/199 (65.83%), Query Frame = 0 Query: 114 TVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQMAQAPKGGGAA---AVTPGKKPPGCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFVDYET--GAPKASYKAPNGRQWSK 308 TVYVEGI Y+A E DL+ F CG VKEVRMPR+QDSG+PRGYAH+ F+ S+ KAL L+G + GRYLTV+ A+ P+ A + K GC TVF+K+LPY++ E VR+A CG I ++RL +W HT++ KGF Y++F E+ A AVK+ G +++G R V + ET APKAS++ +GR W+K Sbjct: 150 TVYVEGIPYKADEGDLVSHF--SSCGIVKEVRMPRYQDSGKPRGYAHVVFESA--SSIPKALKLDGKYLFGRYLTVKQAERPRTLDVALQEQKSVKKAVKGCRTVFIKHLPYDVEEAAVREALASCGTILSVRLPLWNHTKKLKGFGYVEFSSEDEAIAAVKRSG-MKIGDRMVIISLETAGSAPKASFRLRDGRFWNK 343
BLAST of NO04G00490 vs. NCBI_GenBank
Match: XP_009526564.1 (hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae] >EGZ17506.1 hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]) HSP 1 Score: 174.5 bits (441), Expect = 5.400e-40 Identity = 95/210 (45.24%), Postives = 132/210 (62.86%), Query Frame = 0 Query: 114 TVYVEGISYQATEDDLIRFFQDKGCGKVKEVRMPRWQDSGRPRGYAHIEFKKGGEESVGKALALNGVSMMGRYLTVQMAQAPKGGGAAAV-----TPGKKPPGCDTVFVKNLPYNITEDTVRDAFTFCGKIRTIRLAIWQHTQQQKGFCYIQFEKENAAEIAVKKQGVIQVGGRKVFV--DYETGAPKASYKAPNGRQWSKVQGKGETAR 317 TVYVEGI Y+A E DL+ F CG V+EVRMPR+QDSG+PRGYAH+ F E ++ KAL L+G + RYL+++ A+AP+ A T K GC TVF+K LPY + E T+R+A CG I ++RL IW HT++ KGF Y++F E+ A A ++ G +++G R V + D APKAS++ +G+ WS KGE A+ Sbjct: 69 TVYVEGIPYRANEGDLVTHF--SSCGTVREVRMPRYQDSGKPRGYAHVVF--DDEAALKKALKLDGQYLFNRYLSIRRAEAPRAVEMALKEKNQNTTKKAVKGCRTVFIKQLPYEVEEGTIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAARRSG-MKIGDRMVLISLDAAGSAPKASFRQRDGQYWS----KGEEAK 269 The following BLAST results are available for this feature:
BLAST of NO04G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00490 ID=NO04G00490|Name=NO04G00490|organism=Nannochloropsis oceanica|type=gene|length=1892bpback to top protein sequence of NO04G00490.2 >NO04G00490.2-protein ID=NO04G00490.2-protein|Name=NO04G00490.2|organism=Nannochloropsis oceanica|type=polypeptide|length=356bpback to top protein sequence of NO04G00490.1 >NO04G00490.1-protein ID=NO04G00490.1-protein|Name=NO04G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=326bpback to top Synonyms
Publications
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