NO04G00460, NO04G00460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00460 vs. NCBI_GenBank
Match: EWM28486.1 (phosphoglycerate bisphosphoglycerate mutase family protein [Nannochloropsis gaditana]) HSP 1 Score: 398.3 bits (1022), Expect = 2.100e-107 Identity = 186/256 (72.66%), Postives = 213/256 (83.20%), Query Frame = 0 Query: 28 AYIDVVICRHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERGQRFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFVPEIQEICLYDWQGQLRKDLQVLYPDEFENWMNQPATFCIGQHYPVRELWTRAKRGWEVILSQSKPFERVLVVAHSGINQALCFAALGHQEPMYRRLNFPNCGALHLRLALPTSPAETAEMVQAGGYTLPV----PVVDAEEVDDGDTSMAQYYRRVHPFEWEPELH 280 +YIDV++CRHGETCHNAEGRCQGMEDVSRLT++GE+QALELGRALA R QRFDRIFISPLARARHTFD MEK+WR LG+ YP+CAPTFVPEIQEICLYDWQG LR+DLQ +P+EF NWMN+PA F +G H+PVRELW RA+R WE IL+QS+P ERVL+VAHSGINQA+CF ALG+ E MYRRLNFPNCGAL LRLALPTS AE +VQ GGYTLPV + A E + D M ++YR VHP +WEPE H Sbjct: 52 SYIDVILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERVLIVAHSGINQAMCFTALGYGETMYRRLNFPNCGALRLRLALPTSLAEATALVQVGGYTLPVTDSETMFAANECGEEDRPM-RHYRPVHPNDWEPEEH 306
BLAST of NO04G00460 vs. NCBI_GenBank
Match: XP_005854836.1 (phosphoglycerate bisphosphoglycerate mutase family protein, partial [Nannochloropsis gaditana CCMP526] >EKU21524.1 phosphoglycerate bisphosphoglycerate mutase family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 280.0 bits (715), Expect = 8.400e-72 Identity = 124/159 (77.99%), Postives = 142/159 (89.31%), Query Frame = 0 Query: 28 AYIDVVICRHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERGQRFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFVPEIQEICLYDWQGQLRKDLQVLYPDEFENWMNQPATFCIGQHYPVRELWTRAKRGWEVILSQSKPFERV 187 +YIDV++CRHGETCHNAEGRCQGMEDVSRLT++GE+QALELGRALA R QRFDRIFISPLARARHTFD MEK+WR LG+ YP+CAPTFVPEIQEICLYDWQG LR+DLQ +P+EF NWMN+PA F +G H+PVRELW RA+R WE IL+QS+P ERV Sbjct: 57 SYIDVILCRHGETCHNAEGRCQGMEDVSRLTSKGESQALELGRALAARKQRFDRIFISPLARARHTFDLMEKEWRRLGWTDYPKCAPTFVPEIQEICLYDWQGHLRQDLQAQFPEEFHNWMNEPAIFRVGDHFPVRELWMRARRSWEQILTQSQPGERV 215
BLAST of NO04G00460 vs. NCBI_GenBank
Match: XP_005825982.1 (hypothetical protein GUITHDRAFT_76658 [Guillardia theta CCMP2712] >EKX39002.1 hypothetical protein GUITHDRAFT_76658 [Guillardia theta CCMP2712]) HSP 1 Score: 144.1 bits (362), Expect = 7.200e-31 Identity = 77/187 (41.18%), Postives = 113/187 (60.43%), Query Frame = 0 Query: 36 RHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERGQRFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFVPEIQEICLYDWQGQLRK-DLQVLYPDEFENWMNQ-PATFCIGQ-HYPVRELWTRAKRGWEVILSQSKPFERVLVVAHSGINQALCFAALGHQEPMYRRLNFPNCG 220 RHG+T +NAEGR QG D SRLT +GEAQA +GR L++ D +F+SPL RAR T + A G + + +++E+ L++W+G L+K +++ +YPD + W + P F + YP+R+LW RA + WEV+ + + L+VAH+GINQAL LG E +R+L FPNCG Sbjct: 21 RHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGRILSD--IPIDSVFVSPLTRARMTL-----ELAAAGSGRNLSDSAMVLDDLREVDLHEWEGMLKKQEIKEMYPDIYSLWRGENPREFKLDSGKYPIRDLWKRAGKVWEVLRRDAANGKTSLIVAHNGINQALLCTTLGLSEEYFRKLEFPNCG 200
BLAST of NO04G00460 vs. NCBI_GenBank
Match: ABF73003.1 (plastid phosphoglycerate mutase protein precursor, partial [Karenia brevis]) HSP 1 Score: 142.5 bits (358), Expect = 2.100e-30 Identity = 77/196 (39.29%), Postives = 112/196 (57.14%), Query Frame = 0 Query: 33 VICRHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERGQ-RFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFV--PEIQEICLYDWQGQLRKDLQVLYPDEFENWMNQPATFCIGQHYPVRELWTRAKRGWEVILSQSKPFERV----LVVAHSGINQALCFAALGHQEPMYRRLNFPNCGAL 222 +I RHGET NA+G QG D+SRLT +G+AQA + G LA +++F+SPL RA T + L ++ P P + PE++EI LY W+G+ ++DL+ PD ++ W + F + HYP+ ELW RAK W I + + L+V H+GI QAL F+A+G +R+L+FPN GAL Sbjct: 100 LILRHGETNFNAKGILQGSSDISRLTEKGQAQANKAGMELATLSDLPIEQVFVSPLTRATSTLE--------LVAQSLPCSLPEAITLPELREIDLYSWEGKQKEDLKREMPDTYQAWKSADPDFVVDGHYPLVELWQRAKEAWAAIRASEDGKRDIDGVTLIVCHNGIGQALFFSAIGLDASYFRQLSFPNAGAL 287
BLAST of NO04G00460 vs. NCBI_GenBank
Match: CBN75661.1 (plastid phosphoglycerate mutase protein precursor [Ectocarpus siliculosus]) HSP 1 Score: 141.7 bits (356), Expect = 3.600e-30 Identity = 82/218 (37.61%), Postives = 121/218 (55.50%), Query Frame = 0 Query: 34 ICRHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERG--QRFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFVPEIQEICLYDWQGQLRKDLQVLYPDEFENWMNQPATFCIGQHYPVRELWTRAKRGWEVILS----QSKPFERVLVVAHSGINQALCFAALGHQEPMYRRLNFPNCGALHLRLALPTSPAETAEMV--QAGGY 244 + RHG+T NA GR QG D S LT +G +QALE G+ LA + +SP+ RA+ T + + ++ R VP+I+EI L++WQGQL++D+ P+++ +W+ P+ F YP R+LW RA W+ I S Q +P R LVVAH+ INQAL + ALG +R+L++PNC L L+ + AE V +A G+ Sbjct: 86 LLRHGQTNFNAIGRIQGTLDSSILTEEGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSEISKDFETV-EIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWKRASNAWDQIRSLQSIQDQP--RTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEASGF 300
BLAST of NO04G00460 vs. NCBI_GenBank
Match: ACR34191.1 (unknown [Zea mays]) HSP 1 Score: 132.9 bits (333), Expect = 1.700e-27 Identity = 80/189 (42.33%), Postives = 104/189 (55.03%), Query Frame = 0 Query: 32 VVICRHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERGQRFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFVPEIQEICLYDWQGQLRKDLQVLYPDEFENWMNQPATFCIGQHYPVRELWTRAKRGWEVILSQSKPFERVLVVAHSGINQALCFAALGHQEPMYRRLNFPNCGA 221 VV+ RHG++ NAEGR QG D S LT +GEAQA + LA FD F SPLAR+R T E W+ P P+++EI LY +QG L+++ + Y + W A F I HYPV+ELW RA+ WE IL+ + VLVVAH+ +NQAL +LG +R L NCGA Sbjct: 39 VVLVRHGQSTWNAEGRIQGSSDASVLTPKGEAQAETCRQMLA--SDSFDACFTSPLARSRRT---AEIIWQGRXXXXXDGLIPD--PDLREIDLYSFQGLLKREGRERYGPLYRQWQKNAAEFSIDGHYPVQELWDRARSCWERILAHRG--KSVLVVAHNAVNQALVATSLGLGAEHFRILLQSNCGA 218
BLAST of NO04G00460 vs. NCBI_GenBank
Match: NP_001307049.1 (uncharacterized protein LOC100274536 [Zea mays]) HSP 1 Score: 132.9 bits (333), Expect = 1.700e-27 Identity = 80/189 (42.33%), Postives = 104/189 (55.03%), Query Frame = 0 Query: 32 VVICRHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERGQRFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFVPEIQEICLYDWQGQLRKDLQVLYPDEFENWMNQPATFCIGQHYPVRELWTRAKRGWEVILSQSKPFERVLVVAHSGINQALCFAALGHQEPMYRRLNFPNCGA 221 VV+ RHG++ NAEGR QG D S LT +GEAQA + LA FD F SPLAR+R T E W+ P P+++EI LY +QG L+++ + Y + W A F I HYPV+ELW RA+ WE IL+ + VLVVAH+ +NQAL +LG +R L NCGA Sbjct: 39 VVLVRHGQSTWNAEGRIQGSSDASVLTPKGEAQAETCRQMLA--SDSFDACFTSPLARSRRT---AEIIWQGRXXXXXDGLIPD--PDLREIDLYSFQGLLKREGRERYGPLYRQWQKNAAEFSIDGHYPVQELWDRARSCWERILAHRG--KSVLVVAHNAVNQALVATSLGLGAEHFRILLQSNCGA 218
BLAST of NO04G00460 vs. NCBI_GenBank
Match: AQK57374.1 (putative 2-carboxy-D-arabinitol-1-phosphatase [Zea mays]) HSP 1 Score: 132.9 bits (333), Expect = 1.700e-27 Identity = 80/189 (42.33%), Postives = 104/189 (55.03%), Query Frame = 0 Query: 32 VVICRHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERGQRFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFVPEIQEICLYDWQGQLRKDLQVLYPDEFENWMNQPATFCIGQHYPVRELWTRAKRGWEVILSQSKPFERVLVVAHSGINQALCFAALGHQEPMYRRLNFPNCGA 221 VV+ RHG++ NAEGR QG D S LT +GEAQA + LA FD F SPLAR+R T E W+ P P+++EI LY +QG L+++ + Y + W A F I HYPV+ELW RA+ WE IL+ + VLVVAH+ +NQAL +LG +R L NCGA Sbjct: 39 VVLVRHGQSTWNAEGRIQGSSDASVLTPKGEAQAETCRQMLA--SDSFDACFTSPLARSRRT---AEIIWQGRXXXXXDGLIPD--PDLREIDLYSFQGLLKREGRERYGPLYRQWQKNAAEFSIDGHYPVQELWDRARSCWERILAHRG--KSVLVVAHNAVNQALVATSLGLGAEHFRILLQSNCGA 218
BLAST of NO04G00460 vs. NCBI_GenBank
Match: AQK57377.1 (putative 2-carboxy-D-arabinitol-1-phosphatase [Zea mays]) HSP 1 Score: 132.9 bits (333), Expect = 1.700e-27 Identity = 80/189 (42.33%), Postives = 104/189 (55.03%), Query Frame = 0 Query: 32 VVICRHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERGQRFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFVPEIQEICLYDWQGQLRKDLQVLYPDEFENWMNQPATFCIGQHYPVRELWTRAKRGWEVILSQSKPFERVLVVAHSGINQALCFAALGHQEPMYRRLNFPNCGA 221 VV+ RHG++ NAEGR QG D S LT +GEAQA + LA FD F SPLAR+R T E W+ P P+++EI LY +QG L+++ + Y + W A F I HYPV+ELW RA+ WE IL+ + VLVVAH+ +NQAL +LG +R L NCGA Sbjct: 39 VVLVRHGQSTWNAEGRIQGSSDASVLTPKGEAQAETCRQMLA--SDSFDACFTSPLARSRRT---AEIIWQGRXXXXXDGLIPD--PDLREIDLYSFQGLLKREGRERYGPLYRQWQKNAAEFSIDGHYPVQELWDRARSCWERILAHRG--KSVLVVAHNAVNQALVATSLGLGAEHFRILLQSNCGA 218
BLAST of NO04G00460 vs. NCBI_GenBank
Match: AQK57372.1 (putative 2-carboxy-D-arabinitol-1-phosphatase [Zea mays]) HSP 1 Score: 132.9 bits (333), Expect = 1.700e-27 Identity = 80/189 (42.33%), Postives = 104/189 (55.03%), Query Frame = 0 Query: 32 VVICRHGETCHNAEGRCQGMEDVSRLTAQGEAQALELGRALAERGQRFDRIFISPLARARHTFDHMEKQWRALGFRAYPRCAPTFVPEIQEICLYDWQGQLRKDLQVLYPDEFENWMNQPATFCIGQHYPVRELWTRAKRGWEVILSQSKPFERVLVVAHSGINQALCFAALGHQEPMYRRLNFPNCGA 221 VV+ RHG++ NAEGR QG D S LT +GEAQA + LA FD F SPLAR+R T E W+ P P+++EI LY +QG L+++ + Y + W A F I HYPV+ELW RA+ WE IL+ + VLVVAH+ +NQAL +LG +R L NCGA Sbjct: 39 VVLVRHGQSTWNAEGRIQGSSDASVLTPKGEAQAETCRQMLA--SDSFDACFTSPLARSRRT---AEIIWQGRXXXXXDGLIPD--PDLREIDLYSFQGLLKREGRERYGPLYRQWQKNAAEFSIDGHYPVQELWDRARSCWERILAHRG--KSVLVVAHNAVNQALVATSLGLGAEHFRILLQSNCGA 218 The following BLAST results are available for this feature:
BLAST of NO04G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00460 ID=NO04G00460|Name=NO04G00460|organism=Nannochloropsis oceanica|type=gene|length=888bpback to top protein sequence of NO04G00460.1 >NO04G00460.1-protein ID=NO04G00460.1-protein|Name=NO04G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=296bpback to top Synonyms
Publications
|