NO04G00390, NO04G00390 (gene) Nannochloropsis oceanica

Overview
NameNO04G00390
Unique NameNO04G00390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1673
Alignment locationchr4:159767..161439 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:159767..161439 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL073nonsL073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR112ngnoR112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR105ngnoR105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00390.1NO04G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00390.1NO04G00390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00390 ID=NO04G00390|Name=NO04G00390|organism=Nannochloropsis oceanica|type=gene|length=1673bp
AGCACCCTCAACAACTATCTCTTCGAAGCAATAGTAAGGTAGCGAAAAGT
AAGTCACGAGAAATAAGAAGGAAAAAAAATGAAAAAAAAATGATGGAAAG
TAGCGGATTTGGCAGCATGCGATTTCTCATTGAATGGGAAAGAAGGGGTC
AGTCTTCGCCTGTAGGAAAAGAAGCTTCGCAAGCCCATCAGCTTAAGACC
CCCTGGGATTCCTTATCCTTACAGGCGAAGGAAATTGGGGAAGCGGCAGG
AAATGGGGGCCTTGGGAAGGGGAAGTCGAAATCCCAGGTGTTGAAAACCA
TGTTGTTTACCTCGCGACACAAGAAGCGGGCTTGCACTTCTTGACTTGGG
CTGCATACTACTGAGTGGATCAATCAAACAAACACACCCCGTGATACATA
CCCCCGCGAGTTCTAATCACACAGTCACTTATTTATCAAGCGGGAATTCA
AGTTCCCATTCAAGCCATCGCCGATTGCCTGCCTGTTCCTGCAGCAACTC
CTCACCCGGCGAAAGAGCGATCCAAAAACACCAAGTTTCAACGTTCATTG
CATACGACTTGTAGAGTCTGATCCCACACAACCCTCCACCACACAGACCC
ATGGCAGATCCGAGAAGTGCTCTCAGCACGAGTAACAGGCCACTGCCCTC
ATCCCCGTCTCCGCCGCCCTCGCCGCTTTTGCAATTTTTCATAAGCAAAT
CATCCTCCTCCTCCTCCTCCTCTTCCTCTTCCGTCTCCTCTTCCTCCTCC
TCCTCCTCTGTTCCGGCAGCAGGTGGTCCTGCGCAACCACGTGCCATGCC
TAACCTTGCGTCTTCCACATCCTCATCCTCACCTTCTGCTGCTGCCCCAA
CAACCACATTTCCTGGCCTCATCAAGTCCAAGAGCCTCGGCTTCCTATCG
GGCGTCTTCTTTGCTGCGCCTTCTGCGGCCGGGGGGGAGAATAGCACGAG
CCTCGCAAATATGAACAGCGGCGGGAGTAGTAGCAGCACTCTCAAGATAT
CTTCGCCTCCTCTAGTTGTACCCGTGGTAAGGTCTTCTGCACTTGCCCCG
GAGGGGAAGGGGCAGCAGCTCATGATGATGCAAATGGTGCTGGACATGTG
AGCGGGTAGAGACCGAACGAAAGGGGGAGAACGACGATAAAGCAAAGGAA
GAGTGTGAGGCAATTGAAGCCACACAGAACAAGTCAAGCAAGTAAGTGAC
TGGGATTAGAAACGAAATGGCTGGCATCAGCAAAACAGGAGTGTGCGCGG
GAGTATGGTTGTATTTTAAAGTTGAAGACTTAGTGGGGAAAGATTGGGGT
GATCACCGTTGGTAGTTGGACTTTCTAATTGTTCTCTATAAGCAATCTGA
TGATCAGCCCGGAAGAAAGGAAGCGTCTTCAGAAGGTCTGCATGCTTGCT
TGTGTGAGTGAGCCGGTTCGTGACAAACAAAAAGGAGTCTGTCAGCAGGG
GTAGGTCCCATGATAAATTGACAACGGAGAGACAAGATGGAACCAAGAAG
GAAGAGGTCATACAGATACCATGAAATTTCATGTAACAAGCTGAACGATT
GCAACCAGAAAAAAGGAAAAGAAACTCCATACCGTAAAGGGATGATACTT
GTGATATTTGTCAATTTTTCCTTCTCTTTTTTCGTTGCTCTCTCAAACAA
CTGAAATGAAATGGAAGGACGTG
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protein sequence of NO04G00390.1

>NO04G00390.1-protein ID=NO04G00390.1-protein|Name=NO04G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=167bp
MADPRSALSTSNRPLPSSPSPPPSPLLQFFISKSSSSSSSSSSSVSSSSS
SSSVPAAGGPAQPRAMPNLASSTSSSSPSAAAPTTTFPGLIKSKSLGFLS
GVFFAAPSAAGGENSTSLANMNSGGSSSSTLKISSPPLVVPVVRSSALAP
EGKGQQLMMMQMVLDM*
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Synonyms
Publications