NO04G00330, NO04G00330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_009829311.1 (hypothetical protein H257_05974 [Aphanomyces astaci] >ETV81453.1 hypothetical protein H257_05974 [Aphanomyces astaci]) HSP 1 Score: 107.8 bits (268), Expect = 4.100e-20 Identity = 73/214 (34.11%), Postives = 114/214 (53.27%), Query Frame = 0 Query: 3 SVAELLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSELERQ--------IGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLAR-RYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVC 208 S + L P+ +KL FEL++Q+ +E + D R+ + L++LV E P RE W +K+ ++ E M L T L++ R E +ER+ L++R R+ G D + L +E S RS M+N++ G AT+SNL DQRS LK +KVLD+ S LG+S ++ + ERR+ DK IV GG+ + L +++C Sbjct: 2 SCSALYPQARKLVFELKTQLNYLESSPSNSDGTGGSTESQARENAAGLKSLVDQLDSLVYNENPSNREIWAKKVHQIREEYMLLNTTLEQRCIQFSRSQIEFQERDKLMSRQRHQNGND-------IHYLSQEHDSLHRSSRMINELNDLGAATMSNLNDQRSRLKGVHRKVLDVASHLGLSGSLLRVIERRETADKWIVYGGIFVVLGFMYIC 208
BLAST of NO04G00330 vs. NCBI_GenBank
Match: GAX96081.1 (Hypothetical protein PINS_003940, partial [Pythium insidiosum]) HSP 1 Score: 107.8 bits (268), Expect = 4.100e-20 Identity = 76/214 (35.51%), Postives = 118/214 (55.14%), Query Frame = 0 Query: 3 SVAELLPKTKKLAFELQSQVRQVELGYVS-------PDNVFMGLSELERQIGILNTLVGQERPGA--REQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVC 208 +++ L P+ +KL +EL+ Q+ ++ G + LS L++ + L++LV Q P A +E W +++ +L NE L L++ + R E +ERE LL+RR G D ++ Q E S QRS M++D+ Q+ L +L QRS++KS R KVLDI + LG+SS ++ + ERRD VD IV GM LTL+ L+ C Sbjct: 29 TLSSLYPQARKLQYELKMQISYLDSGRTGGRSDDELQSDARANLSALQQLLWQLDSLV-QLEPKAIEKETWAKRLQQLRNETQALGHTLEQHIYRVSRRAVEMRERESLLSRR-NAGFDSANAAMYAAQ---ESESLQRSSQMVSDLTSLSQSILGDLSTQRSAMKSVRTKVLDIANRLGLSSSLLRVIERRDTVDFWIVVAGMILTLLFLYAC 237
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_794856.3 (PREDICTED: Golgi SNAP receptor complex member 2-like [Strongylocentrotus purpuratus]) HSP 1 Score: 107.5 bits (267), Expect = 5.300e-20 Identity = 64/202 (31.68%), Postives = 113/202 (55.94%), Query Frame = 0 Query: 13 KLAFELQSQVRQVEL-----GYVSPDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVCWK 210 ++ ++Q+ + +VE +++ + + L L L+ LV +E R+ + K+ +L + L L + R + QE K+REDLL RR+ D +I +D ++ S S M+++L SG AT++NL DQR LK A++K+LD+ ++LG+S+ +M + E+R DK+I+ GGM LTL+V++ +K Sbjct: 12 RIVLDVQNGLSRVEQARKEDAHLAENEIKARLDNLASNCDTLDILVNKEPVARRQNAKLKVDQLKYDCQHLNAALRQIQHRRYQREQEDKDREDLLTRRFTANDD--NTSIMIDHELQHNTSLHNSHREMDNLLASGSATITNLRDQRGMLKGAQRKMLDVSNMLGLSNTVMRLIEKRTFQDKIILFGGMILTLIVMYYIYK 211
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_008907039.1 (hypothetical protein PPTG_13072 [Phytophthora parasitica INRA-310] >ETI44217.1 hypothetical protein F443_11069 [Phytophthora parasitica P1569] >ETL90819.1 hypothetical protein L917_10581 [Phytophthora parasitica] >ETM44113.1 hypothetical protein L914_10631 [Phytophthora parasitica] >ETN07754.1 hypothetical protein PPTG_13072 [Phytophthora parasitica INRA-310] >ETO72868.1 hypothetical protein F444_11144 [Phytophthora parasitica P1976] >ETP42091.1 hypothetical protein F442_10971 [Phytophthora parasitica P10297] >KUF86072.1 Membrin-11 [Phytophthora nicotianae]) HSP 1 Score: 106.7 bits (265), Expect = 9.100e-20 Identity = 73/210 (34.76%), Postives = 118/210 (56.19%), Query Frame = 0 Query: 7 LLPKTKKLAFELQSQVRQVELGYVS-------PDNVFMGLSELERQIGILNTLV-GQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVCW 209 L P+ +KL FEL+ Q+ ++ G LS LE+ + L++LV +P ++ W +++ +L +E L + L++ + S R EA+ERE L++RR G D ++ Q E S QRS M++D+ Q+ L +L +QR+ +K+ R K+LDI + LG+SS ++ + ERRD VD IV GGM TLV L++C+ Sbjct: 15 LYPQARKLQFELKMQMSYLDSGRTGGKTDAELQAEARGNLSTLEQLLWQLDSLVQTNAKPTEKDTWTKRLQQLRSETHALGSTLEQHIYSVNRRAVEARERESLMSRR-NAGFDSGNGAMYAAQ---ESESLQRSSQMVSDLTSLSQSILGDLGEQRNRMKNVRTKLLDIANRLGLSSSLLRVIERRDTVDFWIVIGGMIFTLVFLYLCY 220
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_008608113.1 (hypothetical protein SDRG_04228 [Saprolegnia diclina VS20] >EQC38521.1 hypothetical protein SDRG_04228 [Saprolegnia diclina VS20]) HSP 1 Score: 106.3 bits (264), Expect = 1.200e-19 Identity = 72/203 (35.47%), Postives = 107/203 (52.71%), Query Frame = 0 Query: 7 LLPKTKKLAFELQSQVRQVELGYVSPDNVFM--GLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVC 208 L P+ KL FEL++Q+ ++ G S + + L I L++LV E P R+ W +K+ +L + L L++ R E +ER+ LL+RR Q+ + L E S RS M+ND+ ATL NL DQR +K ++KVLD+ + LG+S ++ + ERRD VDK IV GGM L L ++VC Sbjct: 8 LYPRAGKLVFELKTQLGYLDQGASSSTEMQARETAAALRSLIDQLDSLVYSENPAGRDIWMKKVQQLREDYALLNNTLEQRCIQSSRSQIELQERQKLLSRRGNAAQND------IAMLSHEYDSLGRSSRMVNDLTDLSYATLGNLSDQRDRMKGVQRKVLDVANRLGLSGSLLRIIERRDTVDKWIVYGGMVLVLGFMYVC 204
BLAST of NO04G00330 vs. NCBI_GenBank
Match: ETK84234.1 (hypothetical protein L915_10792 [Phytophthora parasitica] >ETL37666.1 hypothetical protein L916_10682 [Phytophthora parasitica] >ETP14042.1 hypothetical protein F441_10982 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 105.9 bits (263), Expect = 1.600e-19 Identity = 68/202 (33.66%), Postives = 111/202 (54.95%), Query Frame = 0 Query: 7 LLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVCW 209 L P+ +KL FEL+ Q+ ++ G S +R+ +P ++ W +++ +L +E L + L++ + S R EA+ERE L++RR G D ++ Q E S QRS M++D+ Q+ L +L +QR+ +K+ R K+LDI + LG+SS ++ + ERRD VD IV GGM TLV L++C+ Sbjct: 11 LYPQARKLQFELKMQMSYLDSGRTGGKTDAELQSRSQREPQYTGAASTNAKPTEKDTWTKRLQQLRSETHALGSTLEQHIYSVNRRAVEARERESLMSRR-NAGFDSGNGAMYAAQ---ESESLQRSSQMVSDLTSLSQSILGDLGEQRNRMKNVRTKLLDIANRLGLSSSLLRVIERRDTVDFWIVIGGMIFTLVFLYLCY 208
BLAST of NO04G00330 vs. NCBI_GenBank
Match: OQR82714.1 (hypothetical protein ACHHYP_15627 [Achlya hypogyna]) HSP 1 Score: 104.0 bits (258), Expect = 5.900e-19 Identity = 73/208 (35.10%), Postives = 113/208 (54.33%), Query Frame = 0 Query: 2 TSVAELLPKTKKLAFELQSQVRQVELGYVS--PDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVC 208 T+ L+P+ +KL FEL+ Q++ ++ G + L I L++LV E+ +R+ W +++ EL E L L++ R E +ERE LL+RR G Q + + L +E S RS M+N+I TL NL DQR +K ++KVLD+ + LG+SS ++ + ERRDAVDK IV GGM + L +++C Sbjct: 3 TTCGALIPRARKLVFELKEQLKYMDSGATGNMETQARENAAALRSLIDQLDSLVYLEK--SRDIWTKRVHELREEYTLLNNTLEQRCIQSSRSQIELREREKLLSRR-GLNQAND-----IALLSQEHESLGRSSRMVNEITELSYLTLGNLSDQRERMKGVQRKVLDVANRLGLSSSLLRVIERRDAVDKWIVYGGMIVVLGFMYIC 202
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_015230202.1 (PREDICTED: Golgi SNAP receptor complex member 2 isoform X2 [Cyprinodon variegatus]) HSP 1 Score: 102.8 bits (255), Expect = 1.300e-18 Identity = 71/207 (34.30%), Postives = 117/207 (56.52%), Query Frame = 0 Query: 7 LLPKTKKLAFELQSQVRQVELGYVSPDNVFMGLSELERQIG-------ILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWV 207 L +T K E+QSQ+ Q+E D+V + +EL+ +I L L +E P R+ + ++ +L + LRT L F R + +ERE+LL+R + D +T I +D+ ++ +S Q + M+D+L SG + L+ L DQRS+LK KK+LD+ ++LG+S+ +M + ERR DK+I+ GGM LT V +++ Sbjct: 4 LYHQTNKQIHEVQSQMGQLE--RTDRDSVHLLENELQARIDQIFNHLERLEILASKEPPNRRQNAKTRVDQLKYDVQHLRTALQNFQHRRYTREAQEREREELLSRSF-TTNDADT-AIHIDENVQFNSSLQNAHRGMDDLLGSGSSILNGLRDQRSTLKGTHKKMLDVANMLGLSNTVMRLIERRATQDKLIMIGGMLLTCVFMFL 206
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_020677072.1 (membrin-11-like [Dendrobium catenatum] >PKU69645.1 Membrin-11 [Dendrobium catenatum]) HSP 1 Score: 101.7 bits (252), Expect = 2.900e-18 Identity = 66/196 (33.67%), Postives = 105/196 (53.57%), Query Frame = 0 Query: 14 LAFELQSQVRQVELGYVSPDNVFMGLSELERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLWVCWK 210 L+F ++ V Q++ ++ + L R IG G R+ W+RK+ ++ EA LR LD+ + + VQEAKER DLL R G D E D+ + S + S +M+ + +G A LS DQR LK A++K LD+L+ +G+S+ ++ + ERR VDK I GM +T+VV+++ W+ Sbjct: 66 LSFSIKRDVTQIQ-------SLCAEMDRLSRSIG---------AKGQRDLWKRKVEQVAAEADSLRESLDKHALRQQKKVQEAKERADLLGRANG---DSEHILRIFDEEAQAMQSARNSHMMLEEAYATGVAVLSKYADQRDRLKRAQRKALDVLNTVGLSNSVLKLIERRHHVDKWIAYAGMVITVVVMYMFWR 242
BLAST of NO04G00330 vs. NCBI_GenBank
Match: XP_005705154.1 (Golgi SNAP receptor complex member 2 [Galdieria sulphuraria] >EME28634.1 Golgi SNAP receptor complex member 2 [Galdieria sulphuraria]) HSP 1 Score: 101.3 bits (251), Expect = 3.800e-18 Identity = 71/206 (34.47%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 12 KKLAFELQSQVRQVELGYVSPDNVFMGLSE----LERQIGILNTLVGQERPGAREQWRRKISELGNEAMFLRTVLDRFLQSRGRIVQEAKEREDLLARRYGKGQDGETPTIFMDQLMEEGASYQRSGVMMNDILMSGQATLSNLLDQRSSLKSARKKVLDILSLLGMSSRIMGMAERRDAVDKVIVGGGMCLTLVVLW--VCWKAV 212 +KL E + + +E G + LS+ L R + L+TL +E RE W+ KI L ++++ +R + +L +AKERE+LL R GK +I +D E S RS V IL GQATL L QRS LK A+K++LD+ ++LG+S ++ M E R+ VD IV GGM +++++ WK V Sbjct: 9 RKLVLESRDLLDSIETGRENSTQCQTYLSQKINRLTRTLQQLSTLALREPSSRREAWQLKIDRLNSDSLDIRAAFENYLSRSYTAAIQAKEREELLDRYSGK-----DTSIVIDSFQTESQSLHRSNVTTEGILGMGQATLHALSLQRSRLKGAKKRMLDVANVLGISHSVIRMIEGREKVDAYIVYGGMFFIILIVFGIYIWKKV 209 The following BLAST results are available for this feature:
BLAST of NO04G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00330 ID=NO04G00330|Name=NO04G00330|organism=Nannochloropsis oceanica|type=gene|length=2989bpback to top protein sequence of NO04G00330.1 >NO04G00330.1-protein ID=NO04G00330.1-protein|Name=NO04G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=213bpback to top Synonyms
Publications
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