NO04G00180, NO04G00180 (gene) Nannochloropsis oceanica

Overview
NameNO04G00180
Unique NameNO04G00180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4470
Alignment locationchr4:75940..80409 -

Link to JBrowse

Properties
Property NameValue
DescriptionKinesin-like protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:75940..80409 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
GO:0008017microtubule binding
GO:0005524ATP binding
GO:0008017microtubule binding
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0003774motor activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO:0007018microtubule-based movement
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR027640Kinesin-like_fam
IPR001752Kinesin_motor_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
Homology
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_008862242.1 (hypothetical protein H310_01019 [Aphanomyces invadans] >ETW08437.1 hypothetical protein H310_01019 [Aphanomyces invadans])

HSP 1 Score: 340.9 bits (873), Expect = 1.200e-89
Identity = 204/498 (40.96%), Postives = 284/498 (57.03%), Query Frame = 0 
Query:   87 TWRVETFCRIKPQVNSSSPSAKHFRSIPYELRHGQGPLGADPPHRRLRIGVAGSGT-------GGMAFNSRRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMM---DDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQLTASLQAEVLRLRRKISAQETAL---ATALTQTQEEESKNAWRGLTGAEKHLCRDVVRGFV 572
            TW++ T+ RI+P    ++ S        Y +           PH     GVA + T          +   +R E++F +T+VF    +QD+++H     VV   + GYNGTI AYGQTGSGKTFT+TGG+S+ ERG++PRAI+ ++D      D  +K  ISY+EIY +S YDLLD +   KP+E WT++Q+    DDED     R L +YEA SEE+ALNLLFLGN HRITS TPMN AS+RSH IFT+      L+ G  +        KL++VDLAGSER++K D                S   R EG++INLSLH+LEQVI+ALQ K   +K     G+                       P ++H+PYRNS++TS+LR SLGGNC++VF+ TLN E + ++ES+STCRF QRC++++ DV  NEEV+   L   LQAE  RL+R ++  + AL   A   ++ Q +        L  ++K  C  +V  F+
Sbjct:    4 TWKIGTYARIRPLRKGATKS--------YTIA---------SPHD----GVASTITFPYPAAPDSRSNLKQRDELEFKYTQVFDCPTSQDKIFHDACLGVVTGAVEGYNGTILAYGQTGSGKTFTITGGESYQERGIVPRAISTLFDAFEARTDMTYKCYISYLEIYNDSVYDLLDRTHMNKPIEAWTRLQVQLSDDDEDANAQFRKLGVYEAKSEEEALNLLFLGNAHRITSDTPMNMASSRSHSIFTM------LIEGHRHNSEVILHSKLHVVDLAGSERVYKRD---------------GSERMRTEGRFINLSLHHLEQVILALQTKPAAKKGAKAMGK-----------------------PPNHHVPYRNSMLTSVLRGSLGGNCKSVFIGTLNPEAEFVDESISTCRFMQRCSEVAVDVHVNEEVDVYVLAELLQAENKRLQRDLAVTQAALKDQADVNSKLQAQVHPGVAMELHASDKAECDQLVEKFL 436
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_008862243.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW08438.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 340.9 bits (873), Expect = 1.200e-89
Identity = 204/498 (40.96%), Postives = 284/498 (57.03%), Query Frame = 0 
Query:   87 TWRVETFCRIKPQVNSSSPSAKHFRSIPYELRHGQGPLGADPPHRRLRIGVAGSGT-------GGMAFNSRRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMM---DDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQLTASLQAEVLRLRRKISAQETAL---ATALTQTQEEESKNAWRGLTGAEKHLCRDVVRGFV 572
            TW++ T+ RI+P    ++ S        Y +           PH     GVA + T          +   +R E++F +T+VF    +QD+++H     VV   + GYNGTI AYGQTGSGKTFT+TGG+S+ ERG++PRAI+ ++D      D  +K  ISY+EIY +S YDLLD +   KP+E WT++Q+    DDED     R L +YEA SEE+ALNLLFLGN HRITS TPMN AS+RSH IFT+      L+ G  +        KL++VDLAGSER++K D                S   R EG++INLSLH+LEQVI+ALQ K   +K     G+                       P ++H+PYRNS++TS+LR SLGGNC++VF+ TLN E + ++ES+STCRF QRC++++ DV  NEEV+   L   LQAE  RL+R ++  + AL   A   ++ Q +        L  ++K  C  +V  F+
Sbjct:    4 TWKIGTYARIRPLRKGATKS--------YTIA---------SPHD----GVASTITFPYPAAPDSRSNLKQRDELEFKYTQVFDCPTSQDKIFHDACLGVVTGAVEGYNGTILAYGQTGSGKTFTITGGESYQERGIVPRAISTLFDAFEARTDMTYKCYISYLEIYNDSVYDLLDRTHMNKPIEAWTRLQVQLSDDDEDANAQFRKLGVYEAKSEEEALNLLFLGNAHRITSDTPMNMASSRSHSIFTM------LIEGHRHNSEVILHSKLHVVDLAGSERVYKRD---------------GSERMRTEGRFINLSLHHLEQVILALQTKPAAKKGAKAMGK-----------------------PPNHHVPYRNSMLTSVLRGSLGGNCKSVFIGTLNPEAEFVDESISTCRFMQRCSEVAVDVHVNEEVDVYVLAELLQAENKRLQRDLAVTQAALKDQADVNSKLQAQVHPGVAMELHASDKAECDQLVEKFL 436
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: GAX93743.1 (Hypothetical protein PINS_001664 [Pythium insidiosum])

HSP 1 Score: 338.2 bits (866), Expect = 7.800e-89
Identity = 170/370 (45.95%), Postives = 243/370 (65.68%), Query Frame = 0 
Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQLTASLQ 520
            +R  + F F ++F P+++QDQV+  V   +V+S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   +    R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++GEM+ RNL +YEA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+A P+   +          KL+LVDLAGSER++K +  Q                 R EGK+INLSLH+LEQVI++L+   R                              P+   +YH+PYRNS++TS+LR SLGGNC++VF+ TLN E++ L+ES+STCRF QRC+++S +V  N EV+ ++   SL+
Sbjct:  117 QRDALQFQFNDIFDPSVSQDQVFQSVCQDIVNSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTMFEEFERRAHMRYSCFISYLEIYNENVYDLLDRSHTDRPIEEWTKVLLMDDDEGEMHFRNLGVYEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIEARPVDSEV------IVTSKLHLVDLAGSERVYKREGTQR---------------MRTEGKHINLSLHHLEQVILSLRTAKRN-----------------------------PAVSKTYHVPYRNSMLTSVLRGSLGGNCKSVFIATLNPEVEFLDESISTCRFMQRCSEVSVEVAVNSEVDAEKRLQSLE 436
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_009526682.1 (hypothetical protein PHYSODRAFT_501545 [Phytophthora sojae] >EGZ17624.1 hypothetical protein PHYSODRAFT_501545 [Phytophthora sojae])

HSP 1 Score: 335.1 bits (858), Expect = 6.600e-88
Identity = 179/406 (44.09%), Postives = 257/406 (63.30%), Query Frame = 0 
Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNP-------DQLTASLQAEVLRLR-RKISAQETALATALTQTQEEE 548
            +R  +DF F +VF P+I+Q+QV++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I++ P+              KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D ++ES+STCRF QRC++++ D+  N EV+        ++L A L+A    L+ R +  +    A AL   ++EE
Sbjct:   55 QRDGLDFHFNDVFDPSISQEQVFNEVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEEWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIESRPV------DSDMIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRSKRN-------------------------------TVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFIDESISTCRFMQRCSEVAVDIAVNSEVDTEKRLEAVEKLNAELEATNFELQARAVQLENDLKAQALHFAKQEE 408
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_002899590.1 (kinesin-like protein [Phytophthora infestans T30-4] >EEY61950.1 kinesin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 335.1 bits (858), Expect = 6.600e-88
Identity = 167/364 (45.88%), Postives = 243/364 (66.76%), Query Frame = 0 
Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQ 514
            +R  +DF + +VF P+++Q+QV++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+AYDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I++ P+   +          KL+LVDLAGSER++K +  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D++ N EV+ ++
Sbjct:   55 QRDGVDFHYNDVFDPSVSQEQVFNEVCLDIVFSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENAYDLLDRSHTDQPIEEWTKVHLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIESRPMDSDL------IVTSKLHLVDLAGSERVYKREGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSKTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPETDFLDESISTCRFMQRCSEVTVDIVVNTEVDTEK 366
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_024581770.1 (kinesin-like protein [Plasmopara halstedii] >CEG45401.1 kinesin-like protein [Plasmopara halstedii])

HSP 1 Score: 330.1 bits (845), Expect = 2.100e-86
Identity = 173/402 (43.03%), Postives = 254/402 (63.18%), Query Frame = 0 
Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQLTASL--------------QAEVLRLRRKISAQETALA 538
            +R  ++F F  VF P I+Q+Q+++ V   +V S LHG+NGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + PD R+   ISY+EIY E+ YDLLD S    P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +RITS TPMN+AS+RSH IF++ I++ P+   +          KL+LVDLAGSER++K +  Q                 R EGK+INLSLH+LE+VI++L+ K                                 ++  + HIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+E++STCRF QRC++++ DV  N EV+ ++  A++              Q +V++L + ++ Q   LA
Sbjct:   55 QRDGVEFQFHNVFDPTISQEQIFNEVCLDIVHSALHGFNGTILAYGQTGSGKTYTITGGEHYADRGIIPRTLSTIFEEFEKRPDMRYSCYISYLEIYNENVYDLLDRSHTDTPIEDWTKVTLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRITSDTPMNQASSRSHSIFSVMIESRPIDSDV------IVTSKLHLVDLAGSERVYKREGTQR---------------MRSEGKHINLSLHHLEKVILSLRSKRN-------------------------------TASRAQHIPYRNSMLTSVLRGSLGGNCKSVFIATLNYEKDFLDETISTCRFMQRCSEVAVDVAVNTEVDAEKRLATVEKINAELETRNLXXQLQVVQLEKNLNDQALHLA 404
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: ETK71177.1 (hypothetical protein L915_21518 [Phytophthora parasitica])

HSP 1 Score: 329.3 bits (843), Expect = 3.600e-86
Identity = 176/410 (42.93%), Postives = 258/410 (62.93%), Query Frame = 0 
Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTF---GKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQL-------TASLQAEVLRLRRKISAQETALATALTQTQEEESK 550
            +R  +DF F +VF P+++Q+ V++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+         +RP+ S      KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D+  N EV+ ++         A L+   L+L+++ +  E  +     Q  ++E +
Sbjct:   55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIE---------SRPTDSDLIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLESVEKHNAELETTNLQLQQRAAQLERDIKDQTLQFAKQEQQ 409
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: ETL24627.1 (hypothetical protein L916_21382 [Phytophthora parasitica])

HSP 1 Score: 329.3 bits (843), Expect = 3.600e-86
Identity = 176/410 (42.93%), Postives = 258/410 (62.93%), Query Frame = 0 
Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTF---GKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQL-------TASLQAEVLRLRRKISAQETALATALTQTQEEESK 550
            +R  +DF F +VF P+++Q+ V++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+         +RP+ S      KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D+  N EV+ ++         A L+   L+L+++ +  E  +     Q  ++E +
Sbjct:   55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIE---------SRPTDSDLIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLESVEKHNAELETTNLQLQQRAAQLERDIKDQTLQFAKQEQQ 409
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: ETL77849.1 (hypothetical protein L917_21241 [Phytophthora parasitica])

HSP 1 Score: 329.3 bits (843), Expect = 3.600e-86
Identity = 176/410 (42.93%), Postives = 258/410 (62.93%), Query Frame = 0 
Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTF---GKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQL-------TASLQAEVLRLRRKISAQETALATALTQTQEEESK 550
            +R  +DF F +VF P+++Q+ V++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+         +RP+ S      KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D+  N EV+ ++         A L+   L+L+++ +  E  +     Q  ++E +
Sbjct:   55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIE---------SRPTDSDLIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLESVEKHNAELETTNLQLQQRAAQLERDIKDQTLQFAKQEQQ 409
[Close]
BLAST of NO04G00180 vs. NCBI_GenBank
Match: ETP00585.1 (hypothetical protein F441_22016 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 329.3 bits (843), Expect = 3.600e-86
Identity = 176/410 (42.93%), Postives = 258/410 (62.93%), Query Frame = 0 
Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTF---GKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQL-------TASLQAEVLRLRRKISAQETALATALTQTQEEESK 550
            +R  +DF F +VF P+++Q+ V++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+         +RP+ S      KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D+  N EV+ ++         A L+   L+L+++ +  E  +     Q  ++E +
Sbjct:   55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIE---------SRPTDSDLIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLESVEKHNAELETTNLQLQQRAAQLERDIKDQTLQFAKQEQQ 409
The following BLAST results are available for this feature:
BLAST of NO04G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
5001000150020002500300035004000Expect = 1.20e-89 / Id = 40.96Expect = 1.20e-89 / Id = 40.96Expect = 7.80e-89 / Id = 45.95Expect = 6.60e-88 / Id = 44.09Expect = 6.60e-88 / Id = 45.88Expect = 2.10e-86 / Id = 43.03Expect = 3.60e-86 / Id = 42.93Expect = 3.60e-86 / Id = 42.93Expect = 3.60e-86 / Id = 42.93Expect = 3.60e-86 / Id = 42.93SequenceXP_008862242.1XP_008862243.1GAX93743.1XP_009526682.1XP_002899590.1XP_024581770.1ETK71177.1ETL24627.1ETL77849.1ETP00585.1
Match NameE-valueIdentityDescription
XP_008862242.11.200e-8940.96hypothetical protein H310_01019 [Aphanomyces invad... [more]
XP_008862243.11.200e-8940.96hypothetical protein, variant [Aphanomyces invadan... [more]
GAX93743.17.800e-8945.95Hypothetical protein PINS_001664 [Pythium insidios... [more]
XP_009526682.16.600e-8844.09hypothetical protein PHYSODRAFT_501545 [Phytophtho... [more]
XP_002899590.16.600e-8845.88kinesin-like protein [Phytophthora infestans T30-4... [more]
XP_024581770.12.100e-8643.03kinesin-like protein [Plasmopara halstedii] >CEG45... [more]
ETK71177.13.600e-8642.93hypothetical protein L915_21518 [Phytophthora para... [more]
ETL24627.13.600e-8642.93hypothetical protein L916_21382 [Phytophthora para... [more]
ETL77849.13.600e-8642.93hypothetical protein L917_21241 [Phytophthora para... [more]
ETP00585.13.600e-8642.93hypothetical protein F441_22016 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL073nonsL073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR085ncniR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR112ngnoR112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004969NSK004969Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00180.1NO04G00180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|612122gene_10667Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|577944gene_1797Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100166g4gene2159Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00180.1NO04G00180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00180 ID=NO04G00180|Name=NO04G00180|organism=Nannochloropsis oceanica|type=gene|length=4470bp
ATGTCATCAATATCATTCCGGTCGATGCAAGACCGGCGGGTTCTCACCAG
CACCGGTGGTAATACCAACCGGTCCTCTTTGTCAGTAGGCGAAGGCTCGC
CCCGCGCGACCATCACCTGTACTACCCCAGGCAGCAGCAAGGTAGCCCAC
CGTCGCAGCGCTCAAAAGCACACGGAACAAGAATGTATGAAACAGAAAGA
AAAAGATGAAACCATGCTGGAAGAGCCAGTAAAGAAAAATCGGCAGAAGA
AGCGAACGACTTGGAGGGTCGAGACGTTTTGCCGgtgcgtggtaattgga
gggaatgtgggctcgttaagcgtgatcatgatctggaatttgtacccctt
tttttccttctctctttatagAATCAAGCCACAAGTCAATTCGTCTTCCC
CTTCGGCCAAGCATTTCCGGTCTATCCCTTACGAATTGCGCCATGGACAA
GGACgtacgtattcgttctatttgtgggtggagtaaagatgagcaattat
tggatagggcttatacatccttgtatctctgcttccaatcccaactattt
tttctcataacatagCCCTGGGTGCAGATCCTCCCCACCGCCGCCTTCGT
ATAGGCGTAGCAGGGAGCGGTACAGGTGGGATGGCCTTTAACTCCCGCCG
ACAGGAGATGGACTTCAGCTTCACAGAGgtgcgccagaaagccagacagg
gcaaatggcaaggctggaaagagcaaggatgatatcaataaataattgtt
tgtacatggatgaggaagcaggggctcgttattacctaaactctcctctc
tttctgtccctccctctctcccttcctcttcagGTGTTCCCTCCCGCCAT
CACCCAAGACCAGGTCTACCACCGTGTGGCCAGTGCCGTCGTGGACTCAG
TCCTACATGGATACAACGGCACGATTTTTGCCTgtacgtgcttctcactt
cctcccctcccttccgcacttcttcccgccgtccactgactctcctgttc
ccccaccctccttccctgccagACGGACAGACGGGCTCCGGGAAGACCTT
CACCATGACGGGCGGCGACTCCTTCGACGAGCGCGGCCTCATTCCCCGTG
CCATCACTGATGTCTATGATACCATCAGACAGACGCCTGACCGACGCTTC
AAGgtccttgtcctccctccctccctccctccctacctacctacctacct
agccaatcatccgcccgcccgaatgagaccaacccatgcccccctatcca
ttccccttcctcccccagGTCTTAATTTCTTATATGGAGATCTATAAAGA
GAGCGCATATGACCTCCTGGACGTGAGCACCCGCACTAAACCCTTAGAGG
GGTGGACCAAAgtatgcatgccctccctccctccctccctccctccctcc
ctccctccctccatgcgtccatctctttccacccccctacccccctactc
cagctttatcgaatccaattcatagtcagaaatgcacgataagccttcac
ttggatcttgccctcacacccacgcggagcttcccttggtcagcggttta
aactctctcacccacacactcctgccctcaaccaccactcttcttcttcc
cccccctccagATTCAGATGATGGACGACGAAGATGGGGAAATGAATCTG
CGGAACCTGAAGCTGTACGAGGCCACATCGGAGGAGGATGCTTTGAACCT
CCTCTTCCTCGGCAACTGGCACAGGATTACGAGCTCGACGCCGATgtaag
gaaggagggggggagggacggacggacggacggtgggaatgagggaggga
ccgagggatttgtggtcaagggcgtaatgggctttctggggaagagaagc
tacagtgaggaatggagggaaggagagaaggaaagggagggagggagggg
tctacagctcgatgtcgccttgatcgccgatcttcctcctatatttcttt
tctgtctaattcatgtagGAACGAGGCGAGCACCCGGTCTCATTGCATTT
TCACCATCCGTATCCAAGCCGACCCACTCCTGCACGgtacagagggaggg
cgcgagggagggaagagggaaaggcgggaaagaaagagggcaaaggagtc
cccgtactcacgagagaacaaatgcactaattcctcctcggggttgctct
cccctccctagGCATCCCGAACCGGCCCTCCAAGTCCACCTTTGGCAAGC
TCAATCTCGTCGATCTGGCAGgtaaacctctctccttttttctcctcctc
tcttccttcctccctcccacctttcctcacgttcccttcctttcattcag
GCTCTGAACGTCTCTTCAAGACGGACAACCACCAGAGTAGCAGCAGCAGC
AGCAGCGGCAGCGGCCTGGCCGCCAGCAATTACACGCGGATGGAGGGAAA
GTACATTAATCTGTCCCTTCACTACCTCGAACAGGTCATCATCGCCTTAC
AAGAGAAAGgtatgtcgccctccttccctctccctctccctccctccctc
ctactctcatcctcccaaaatctacatgtccattccttctcaaacttttt
cacttgctctgccttcctctcgctcttctcacattgcctgccgccacata
cagCCCGGAGGCAGAAGGATGAAGATGAGGAAGGACAGGGCCGGCCTGGC
CTTGTCCGCGGTTCCTCCTCCTCTTCCTTCACCAGCAGCTCGCTCTACCC
CTCCTCCCCCTCCTCCTACCACATCCCTTATCGGAATAGCGTCATGACCT
CCATCCTCCGAGACTCCCTTGGCGGGAACTGCAGGACTGTCTTCGTCGTC
ACGCTCAACACGgtcagacaccttccttccctccctccctccctcccttt
tttcacttctttgtctcacgcaccttcctccctttcccttcctccctccc
tccctccctccctccctcccattccctccccagGAACTCGATCACCTGGA
GGAGTCTTTGTCCACCTGCCGATTCGCGCAACGCTGTGCCCAGCTCTCGA
CGGACGTCCTCGCCAACGAAGAAGTGAACCCGGACCAGCTCACGGCCTCC
TTACAAGCTGAGgtatgtcatttctccatccctcgatctattgcttcctc
cctcccttcctcccttcctccctcgatttccctcatccctccttctcaga
gtccttccgccgctttcctatttttccttctttgtgtgtacagGTGCTGC
GTCTCCGTCGCAAGATCTCGGCTCAAGAGACCGCACTTGCGACTGCCCTG
ACCCAAACACgtacgtgccctctacttttctcgctcccttccacgcagcc
catccaccatcccttccccctctcttgtacccgcaacagAGGAAGAAGAA
TCGAAGAACGCCTGGCGGGGTCTGACGGGCGCAGAGAAGCATTTGTGTCG
CGATGTTGTCCGCGGCTTTGTGCAGgtacgagaaagaagagagaaatgga
gggaggacggagccgagggggcatttgtcgtcagcctttactcataatgt
cacgtcttctgccacttagGTCGCGTCCTCCCTCCCTGCCTCCCCTCCCT
CCTCCCCTCCCTCGGGCCCACTCTCCGTCCCTCCCCATTATGAATGGATC
TATACATTGGCACGGCCGCTCGTCGCCTACTGCGCGCGTTTGCTCTTGCT
CTGGGGGGAGGCCGTCAGGGAGGAAGGGAGGAAGGAAAAGAAGGAGGGAG
TGATGAAGTACCAGCAGGAGCAATGGAAACGCCACCAGCGGCTCGAGCAG
GCGCACCACCATCAGCATCGTTCTTCTGTTGGGGAGAGACCCACATCCGG
ATTTGCCTTATTACAGCAGCAGCAACAGCAGCAGCAGCGTGAGCCAGACG
CTCAGATCACCCCACACATCCATACCTCTTTCTTTGCGACTGCAGCCCCC
ACCGCGCCCCTTTCCATCGCTTCCCCCCATCAGGAAGGGAAGGAGGCGGA
GGCGGAGGCGGAAGCGAGGAACGAGGGACGGAGGGTCAGGGGGCTACTGC
AGCAGGGGCATGTCTTTTTCAAGCTGGGGAAAGGGGAAAGGAAGCACGAA
AGATTTGTGTGGGTGGCTCTAGACATGACAAGACTGCACTGGCGGAAGGA
GAGGAAGGGAGAAAAAAAGGGAGGGAATAAGGGGGAGGACGAGGGAGAGC
ATAAAAATGGCAATCCTCCTATTTCTTCCTCGTTCCTTGTTCTTTCAGAC
TGCCAGCGTGTAGCCGCTGGTCGTGACGGCGAGAGAGGGGAAAAGGAGGG
GAAAAGGGAGGAAGAGAAGGGTGTCTTTTTCACCCTGTACAGTCACGACC
GCTACGTCACATTTGAGGTCCCTCCGTCCCCTCATGCCAAGCGAACAAGA
AACGCCTGGGTTGCAGCCTTAGCCTCTGTCCTCCAGCAACAGCAACTACA
GTCGCAGGCCCTCTCTCCCTCACGATCCCCCCCCTCCCTTGTCTTTCTCC
TGTTCCACGAAAGACGTTGA
back to top

protein sequence of NO04G00180.1

>NO04G00180.1-protein ID=NO04G00180.1-protein|Name=NO04G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=889bp
MSSISFRSMQDRRVLTSTGGNTNRSSLSVGEGSPRATITCTTPGSSKVAH
RRSAQKHTEQECMKQKEKDETMLEEPVKKNRQKKRTTWRVETFCRIKPQV
NSSSPSAKHFRSIPYELRHGQGPLGADPPHRRLRIGVAGSGTGGMAFNSR
RQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSG
KTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESA
YDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLF
LGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLN
LVDLAGSERLFKTDNHQSSSSSSSGSGLAASNYTRMEGKYINLSLHYLEQ
VIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIP
YRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLS
TDVLANEEVNPDQLTASLQAEVLRLRRKISAQETALATALTQTQEEESKN
AWRGLTGAEKHLCRDVVRGFVQVASSLPASPPSSPPSGPLSVPPHYEWIY
TLARPLVAYCARLLLLWGEAVREEGRKEKKEGVMKYQQEQWKRHQRLEQA
HHHQHRSSVGERPTSGFALLQQQQQQQQREPDAQITPHIHTSFFATAAPT
APLSIASPHQEGKEAEAEAEARNEGRRVRGLLQQGHVFFKLGKGERKHER
FVWVALDMTRLHWRKERKGEKKGGNKGEDEGEHKNGNPPISSSFLVLSDC
QRVAAGRDGERGEKEGKREEEKGVFFTLYSHDRYVTFEVPPSPHAKRTRN
AWVAALASVLQQQQLQSQALSPSRSPPSLVFLLFHERR*
back to top
Synonyms
Publications