NO04G00070, NO04G00070 (gene) Nannochloropsis oceanica

Overview
NameNO04G00070
Unique NameNO04G00070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5322
Alignment locationchr4:29937..35258 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:29937..35258 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G00070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL073nonsL073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR085ncniR085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR112ngnoR112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004957NSK004957Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00070.1NO04G00070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|612046gene_10653Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00070.1NO04G00070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00070 ID=NO04G00070|Name=NO04G00070|organism=Nannochloropsis oceanica|type=gene|length=5322bp
AACAGCCACGGCTAGCGATGCGACCGACAAGgtgagtgtgttggaggaga
tacagtccacacgcaacacgataatgaggtactcgcagaggggatcgatc
gcgtcgtaccgcgcagcatgcatgtgccatgtacttactcacactccgta
ctctgtactgaagATTCCATTTCTAGGCAGACCTTCTACACACAACAAGG
ATGGATAATATTCTCCCGCAGGACGACTCGGACCCTAGCACCGGTGGCGA
CGGCAACCACCATCATGTGAACTCCCTCCACCAACAGCACACTCACCACC
TCAGCCACCATCACCTTGTACTGACGCACCATTCCCAACTTCTGGGCGAT
GAGGGTGCGGAGGATGGCCTGGACATTAACTGCATGGTGGTGATGGACTC
CGAGGAGGGGGGGAAAGGCAGCGGGGGGGATGAAGAGGGAGAAGGAGGGG
TGGATGCCAGCGTACATCACATCCACCACCACCTTCATCACGATGCAGGG
ACCGAGGACGAGGACCTGGTTTTGTTGCTGGCGCGGGAGGACCAGCAGCA
AACCGAGGAAAGAATCTTAATCCCCTCGGCGGCGGATGCCTGGCTGCAGC
CGATGCAGCAGGACTCAAGGCCTTCCTATATCCTTCCTTCCGCGCCGCCA
CTGGAGCCGTCGGGGCCGCCATTGTACTACCAGTCTTTAGGGTTGCCACA
CTGCACTGCAGGTCCTCTTCAGCACCAGCAGAGTCCTCTTCAGCACCAGC
ACCAGCAGTTTGTGACCCTTCCCCTTCTTCACGTGTTAGATAATCGAAAT
GTGTCATCAACACTACCACCACCATCGGCCGCACGAACAGCAATAGGGAC
AGTATCAAGAGCGCCTTCTTTGAGTTCGCCATCACAGCAGCAGCAACAAC
AACAACAGCTGCAACAGATGGAGCGCCGACGGCAGCGGGATGATGAGGAA
ATGACGGGGTCGCCTCAGTTTGGGGCCAACGAAGCACTAGTGGCTGCGCA
GCAGCAGCAGCAGCAGCAGCAGAGGAAAAAGAAGATGAGAAAGAGGAAGA
TGGGAGGGCAGAAAGAGCCTGTGTTTGTGCGTATGCGTGAGGCAGCACCA
GCACATATTACAGGAGGGAAGAGGAATGTCGTGGGAGAGGAGCAGGACGG
AGTGGCTGCTGTCCTTGGTGGCCAGGCCCTCTCCTCACTGGCAAGACGAA
CGCACGCCGAGGAGGAGGAAGAGTACGAATACTTCCCGTCGCAGCAGCAG
CAGCAGCAACAACAACAGCAACAACAGCAGCAGCAACAGGAGGAGGAGGA
ATCTCAACAACAGCAGCGAGAAGCTATGCCCTCCTCTTCTTCTATCCCTG
TTTCGACAGCCTCATTGGTAGGCATGACAAGCACGAGCCCTACCACCAAC
AAGAAGCGCGAGCGTAGCGGTAGCGGGGTCAGAATAGGAGAAGGGACAGT
AGAAGGGAAAGGAGAAGAAGGAAGGGGAGGATATGGAGGAGGAAAAGAAT
ATGGAGAAGGAGAAGAAGGTGGAGGAGGCAATGGCGGCGAGGGTAAGAAT
TTGGTAAGGCTCACGCCGGCACCATCGTTCTCAAGTAAGGTCCAGGCGGT
AGTGCAGGTGGGCGAGAGAGGAGAAGAGGAGAGCGGGAAAGCCGATGCAC
TCATTGTGCAACCACTTGGAACTGCTTCAAGCCCGCCGCTCGTGTCGGAG
TCAAGCGAGGAGAGAGGACAGGGAGCCGAAGCGGAGAGGAAGAGCGAGGA
GGAAGGGGAGGAAGAGGGCAGTGAGGAAATATCACGCACTGTCAGCATGG
TCATAAAATCGTGCAGTAGGGATACTAGTACACCCGAGGGCTTTCGCTCT
CTCGACTCCAGCGACTCCTTCTCCTCCTCCTCTCCCCCTCCCCCCATCCC
CCCCCACCCGGTAGACCAAAAGCACGAGCCACTGCCACTCTCCCGGAAGG
CCTTCGCGCGCCGACGGCAGCTGACTGCGCCTAATTTCTTCCCCTGGCAG
GAACAGTCGGACAAGAGCTTCTACAAGGACGCAGTCTACGTCTTCTACAA
AAAAGTCTTGCCCTTTGCCGACCGGCTGCGGAGGACAGGCCGCACCAAGG
CCGAGTGGCTGAGGCTGTTGAAGGAGGCAAACCCGGGCATGCCTGGGATG
GGAATGGAAGAGCAGTACTTGCTGTTGGTGGCCATGTGGGATTATTACAG
GGATAAGTTTTTCGTGCCCTTGTCTGTGCCCTGGGGAGGGAGGAAGGAGA
AGGAAGGAAAGAAAGAGGAAAGAAAGACGATGGGGGAGATAGAAGAGTCA
AAGGTTAAAAAGTGGTCCAAGGCGGCGGAAGCGAAGCACGAGGCAATGCT
AACAGGGGCAGACTGCATAAGCTCTTTCGGTCCAGGCGCCGATGCCGCGT
GTGGGGTCCCAGGAGAAGCAGCAGCAGAGGCCGAAAAGGCCTTAGCAGTG
CCTTCGTCTGTGCCTTACACGTGTCCTACCAATGCTGCGGACGTTCTTAA
CACGACCAGAGAGGGCAAGGGAGAGTTACAGAAGGAGAAGCAGGGAGACG
AGAAAGAATCTACGGAGACAGGAGACGATAAGAAGGAGGAGAAGGAGGAG
GAAGAGCAGCAGCAGCTGCAGGGGGGGAAGAAGGAGGAGGCAGCCTCGCA
TGAGCAGTGTCTGTATGCGCTGAAGATCTGCTCGTCGAAGAATAACGAGA
ACTTGACCCTTCGCATCTTTCGAGAGGCTACTTGGACCAATGGCATGCTC
CAGCTCTTCCTCCACCTCTGCTACGGCTACCTGGAGGAGGAGGTTGAGAT
GGAGGGAGGGCAGCTGGCGATGACTCGAGAGGAGTACATTGTGCGGCCGC
GGGCAGAAGAGGTGTATGAGGCGAGGGAGGAACACTTCTTGAGAAAGTTC
ATGAAAGGCTGTCTGAAGGAAGGGGTATTTGGGGGGGAAGGGAAGGGGGG
AAGGGAAGGGGAAGGGATAGTGGTCTGGGAGGAGGGCGGTGCGACCGCGG
GGGAGAGGCAGGCAGGGAGAGAGGAGGAGACGAGGAAGCAATGTGACGCG
TTGGTGGCCCGAGGGGTATTGCTTAAAAATCTGGTGGAGATTCCGATGCA
GGTGTTAAAAGAGAAAGAGGGGGGGCAGCAGGGAGGTGGTGGGGCTGGGC
GGGGAGGAAGAGAAGACGAACCGCCAACCACGCCGAATCTCTGGCTGGAG
GATCTTCCTAACACGCACAAGCAGTTCCCTTCGAGACAGAAGCAGCAGGT
AGAGGAGAGGGGGAATGCAACTGCCACAGCAGCAGCAGCGACAGGAATCA
CGGACATGTCGCTCTCCCATCTGGCTCCCCAGTGCGTTTCCCTCTGTCAT
TCCTCGTCCTCCAACCTCTCTTCCTCATCCACCACTACCATCCGCCGAGC
TGTCTACACCCTCCACCTCCCCACGGCCAGCAAAGACATCGAGTACTGGG
ATTTTACCCACCCTTGTGTCGCCCTCCTCCTTCAGCACATCGACCGCCTT
GGCCCTTCCTCTCCCCCTCCCTGCCCTAACATGCATGAAAACTTTGGGAC
TAACTCTCTTTCCTTCACTCCCTCTTCCCCCTCCTCTCCCTCCCCTCCCT
CCGCTCCCTCTTCTCCCTCCTCCTCGCGCCTGCTTGCCTCCGTCTTGTCC
CTGTACAAGGCCCTTGTGACAGAGAAGCACGCGAAGGACGCAGACGTGAA
AGCCGAGCACCTGCGTATGGGCAGCTTCGACCTGCTCTTCCCTCACCGCC
CCGATTTTCTCTGTGCCCGCGCCCAGGCCATCGCTGCCTCTCCCTCCGCC
CTGCAGACTCGAAACCGTCTCATCCCTTCTGACGGCTCAAAGCTGATAGG
AGGAGGACAGCAGTATCAGCACCACCACCACCAGCAGCAGCAACAACAAC
AGCAGCAGCAGCAGCAGCAGCAGCGACATCGCAAGGCAACTTTTCGAGGT
GAAACAGCAGGAAAAAGGAAAGAAGAAGCCACGCAAGGAGGTGTAGGGAG
GGGGAATGACAGAAAGAAGAGAAGGGGAATAGAGGGTGTAGCTAAAGGTG
GAAGGATCGCCACGTGCGTTGAGGACGAATTGGTCTTCCTGCCATTGGCA
GATGAGGGCCGAAGGGGGAATTGGAAAAAGGAAGAAAAGGGGAAGGGGAA
GGAGGGCAGGACGGGGCCTTATAGTAATGATGGGAGCATCCTAGGCTCGG
GTGTACACGGGGAGGCTCAAAGCTGGGCGAGCAAGGCCGAAGAAGACGGA
GGAAACGGGGCTGGAGAGAGGAAAGGTGGGCAGATGAAGGGGGCCGGCAG
CAGCTGTAGCAAAGCGTCGCCCTCGAGGACAGCCAAGATCACGACCAGCA
GCAGCAGCAGCAGCAGCAGCACGACCACCACCGCCAGCACCAGTTGTTCG
AATAGGATAAAGAGGCCTTTGACGATGGCCAAGGGAGGCTGCAAGAGGAA
GAAAATCAGCTGGTCTCCTGGTTCACTTCTCGACCGAAACACCTGCCTTC
TCCCTTCCACTGTGACGCCGTATGTCACCCCCCTCCTTCTTCGCAACCCC
GACGACCTTCTCCTCTTCGAAACTGCCAAGAGAGCCAGAAGGGCGGCAGC
AGATGCGAAGGCGAAGACAGCTGCAAAAGTGAGGGCTGCTGCTGTAGCGG
CTGCGACAAATGTTAGGGCAGTTGCTGCTGCAGCAGAACTAGTCGTGCAC
GCGTTGCCTGGTGGAGAAGAGGGAAAGGGGGAGAAAGGAAAACAGAAAGC
GATGCCGCTGAGCGTACCCGAAATAATTATGCCCCCGCCTTTGATCGTAA
ATGGGGAAGGACGCTTCCGGCAATCACAACAGCAGCCACTGCAGCAGCAC
ATGCTACTGCATCATATAGCCGTTATCTCAGGTGATGGGGAGAAAGACGA
AGGAGAAGGAAGAGGAGGAGCAGGAGGAGCAAGAGAAGAGGAGCAAGGAG
AGGAAATTTTGGAGCGGAATATCATGGTGTCTCAGCACCAGGAAGAGAGA
TCTCAAAAGCATCAAGTCGGGTTTCCAGGGATGGGGGATATGAAGGATAT
GCAAATAGATTTCCCTAGGCTGGCAGGGGAGATAGAGCACCAGTCGAGAT
GTCAAAGGGGAGAAGGAGTTTTGGCAACGAGTGATTGTAGAGATATAACC
TGTGTTGTTGCTGTCTGAGAAAAGGGAAGAGTTTGGCAAGAAGGGTGTGA
AATATATCGAATGAAATAAAAATGAACACACAAAAAGCGCGTTTATTTTT
AGGTATGCGAAATGGCATGAGAAAGCACAGAGAATGCGACAAAGAGAAAA
AAGACACTCCCGTAATCCAGGA
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protein sequence of NO04G00070.1

>NO04G00070.1-protein ID=NO04G00070.1-protein|Name=NO04G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1656bp
MDNILPQDDSDPSTGGDGNHHHVNSLHQQHTHHLSHHHLVLTHHSQLLGD
EGAEDGLDINCMVVMDSEEGGKGSGGDEEGEGGVDASVHHIHHHLHHDAG
TEDEDLVLLLAREDQQQTEERILIPSAADAWLQPMQQDSRPSYILPSAPP
LEPSGPPLYYQSLGLPHCTAGPLQHQQSPLQHQHQQFVTLPLLHVLDNRN
VSSTLPPPSAARTAIGTVSRAPSLSSPSQQQQQQQQLQQMERRRQRDDEE
MTGSPQFGANEALVAAQQQQQQQQRKKKMRKRKMGGQKEPVFVRMREAAP
AHITGGKRNVVGEEQDGVAAVLGGQALSSLARRTHAEEEEEYEYFPSQQQ
QQQQQQQQQQQQQEEEESQQQQREAMPSSSSIPVSTASLVGMTSTSPTTN
KKRERSGSGVRIGEGTVEGKGEEGRGGYGGGKEYGEGEEGGGGNGGEGKN
LVRLTPAPSFSSKVQAVVQVGERGEEESGKADALIVQPLGTASSPPLVSE
SSEERGQGAEAERKSEEEGEEEGSEEISRTVSMVIKSCSRDTSTPEGFRS
LDSSDSFSSSSPPPPIPPHPVDQKHEPLPLSRKAFARRRQLTAPNFFPWQ
EQSDKSFYKDAVYVFYKKVLPFADRLRRTGRTKAEWLRLLKEANPGMPGM
GMEEQYLLLVAMWDYYRDKFFVPLSVPWGGRKEKEGKKEERKTMGEIEES
KVKKWSKAAEAKHEAMLTGADCISSFGPGADAACGVPGEAAAEAEKALAV
PSSVPYTCPTNAADVLNTTREGKGELQKEKQGDEKESTETGDDKKEEKEE
EEQQQLQGGKKEEAASHEQCLYALKICSSKNNENLTLRIFREATWTNGML
QLFLHLCYGYLEEEVEMEGGQLAMTREEYIVRPRAEEVYEAREEHFLRKF
MKGCLKEGVFGGEGKGGREGEGIVVWEEGGATAGERQAGREEETRKQCDA
LVARGVLLKNLVEIPMQVLKEKEGGQQGGGGAGRGGREDEPPTTPNLWLE
DLPNTHKQFPSRQKQQVEERGNATATAAAATGITDMSLSHLAPQCVSLCH
SSSSNLSSSSTTTIRRAVYTLHLPTASKDIEYWDFTHPCVALLLQHIDRL
GPSSPPPCPNMHENFGTNSLSFTPSSPSSPSPPSAPSSPSSSRLLASVLS
LYKALVTEKHAKDADVKAEHLRMGSFDLLFPHRPDFLCARAQAIAASPSA
LQTRNRLIPSDGSKLIGGGQQYQHHHHQQQQQQQQQQQQQQRHRKATFRG
ETAGKRKEEATQGGVGRGNDRKKRRGIEGVAKGGRIATCVEDELVFLPLA
DEGRRGNWKKEEKGKGKEGRTGPYSNDGSILGSGVHGEAQSWASKAEEDG
GNGAGERKGGQMKGAGSSCSKASPSRTAKITTSSSSSSSSTTTTASTSCS
NRIKRPLTMAKGGCKRKKISWSPGSLLDRNTCLLPSTVTPYVTPLLLRNP
DDLLLFETAKRARRAAADAKAKTAAKVRAAAVAAATNVRAVAAAAELVVH
ALPGGEEGKGEKGKQKAMPLSVPEIIMPPPLIVNGEGRFRQSQQQPLQQH
MLLHHIAVISGDGEKDEGEGRGGAGGAREEEQGEEILERNIMVSQHQEER
SQKHQVGFPGMGDMKDMQIDFPRLAGEIEHQSRCQRGEGVLATSDCRDIT
CVVAV*
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Synonyms
Publications