NO03G05730, NO03G05730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05730 vs. NCBI_GenBank
Match: XP_024397173.1 (4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like [Physcomitrella patens] >PNR39174.1 hypothetical protein PHYPA_019452 [Physcomitrella patens]) HSP 1 Score: 243.4 bits (620), Expect = 8.100e-61 Identity = 126/206 (61.17%), Postives = 156/206 (75.73%), Query Frame = 0 Query: 74 LIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQL-GFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAK--QAGSEKKVYNMIDVLKAGAM 277 +I VDYT P AVN N + Y L FVMGTTGGDR+KLM+DV G+Y+VIAP M KQ+VA QA + MA FPGAF GY L V+ESHQS+K DTSGTAKA+I SF K LG A+ +E+ I M+RD + Q+ VPEA L GHA+HTYQ++SPDG V F+F+HNV GR +YAEGTVDA++FLAK + S+KK+YNMIDVL+ G+M Sbjct: 150 VIVVDYTLPAAVNGNAEFYCSRGLPFVMGTTGGDRDKLMEDVLKSGVYSVIAPQMGKQVVAFQAAMAIMAEQFPGAFSGYKLKVLESHQSTKVDTSGTAKAIIGSFQK-LGLAFDMEE-IEMVRDPKRQIEEMKVPEAHLNGHAYHTYQVVSPDGMVIFEFQHNVCGRSIYAEGTVDAVLFLAKKIRERSDKKLYNMIDVLREGSM 353
BLAST of NO03G05730 vs. NCBI_GenBank
Match: XP_013902087.1 (hypothetical protein MNEG_4890 [Monoraphidium neglectum] >KIZ03068.1 hypothetical protein MNEG_4890 [Monoraphidium neglectum]) HSP 1 Score: 242.3 bits (617), Expect = 1.800e-60 Identity = 123/220 (55.91%), Postives = 157/220 (71.36%), Query Frame = 0 Query: 59 RLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQ--AGSEKKVYNMIDVLKAGAM 277 R Q + +D L+ VDYT P VN N + YAR+ + FVMGTTGGDR K+ A G+YAV+AP M KQ+VA QA +E MA +PG F GY+L V ESHQ +KAD SGTAKA+++S ++ + + D IR IRDREGQL GVPE LGGHAFHTY L SPDGSV+F+F+HNVV R +YAEGTVDA++FLAK+ +++KVYNM+DVL G++ Sbjct: 90 RRQEAMDVVKDRYPGLVVVDYTMPNCVNDNAEFYARNGVPFVMGTTGGDRAKVAAAAEAAGVYAVVAPQMGKQVVAFQAMMEVMAQQYPGVFTGYSLTVTESHQRNKADVSGTAKAVVASLRQMGVEGFKDSD-IRKIRDREGQLQMGVPEDHLGGHAFHTYTLTSPDGSVQFKFKHNVVERSIYAEGTVDAVLFLAKKRAEAAKEKVYNMVDVLLEGSL 308
BLAST of NO03G05730 vs. NCBI_GenBank
Match: XP_005756399.1 (Dihydrodipicolinate reductase [Emiliania huxleyi CCMP1516] >EOD03970.1 Dihydrodipicolinate reductase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 241.9 bits (616), Expect = 2.400e-60 Identity = 129/217 (59.45%), Postives = 155/217 (71.43%), Query Frame = 0 Query: 74 LIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVED---VIRMIRDREGQLGFG---------VPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQAG--SEKKVYNMIDVLKAGAM 277 L+ +D+THPTAVN N + Y ++L FVMGTTGGDR+ L G YAVIAPNMAKQIVALQA LE MA+ F G+FEGY L+VVESHQS+KADTSGTAKA+ +S KL + D I+ +RD + QL G VPEA LGGHAFHTY L S DG+VEFQFRHNV GR YAEG+VDA VFLAK+ G +E++VY+M+DVLK G + Sbjct: 76 LVCIDFTHPTAVNGNAEWYGANRLPFVMGTTGGDRDALFGVTRESGTYAVIAPNMAKQIVALQAALEQMASDFGGSFEGYALSVVESHQSTKADTSGTAKAVSTSLAKLTNEPDFTADDYAQIQRVRDTDEQLAGGGSSHRGCSPVPEAFLGGHAFHTYALTSADGNVEFQFRHNVCGRSTYAEGSVDAAVFLAKRVGAAAEQRVYDMVDVLKMGGI 292
BLAST of NO03G05730 vs. NCBI_GenBank
Match: GAV65105.1 (DapB_N domain-containing protein/DapB_C domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 240.7 bits (613), Expect = 5.300e-60 Identity = 127/222 (57.21%), Postives = 161/222 (72.52%), Query Frame = 0 Query: 58 ARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGF-GVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAK--QAGSEKKVYNMIDVLKAGAM 277 +R + +LA D +I VDYT PTAVN N +LYA+ + FVMGTTGGDR+ L V G+YAVI+P M KQ+VA A +E MA FPGAF GY+L V+ESHQ+SK DTSGTAKA++S F K LG ++ + D I+MIRD+ Q+ GVPE L GHAFH Y L SPD +V F+F+HNV GR +YAEGTVDA++FLAK QA ++K++YNMIDVL+ G M Sbjct: 121 SRRETVLASLFDQYPEIIVVDYTIPTAVNDNAELYAKVGVPFVMGTTGGDRDLLYKTVEDSGVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLRVMESHQASKVDTSGTAKAVVSCFQK-LGVSFEM-DQIQMIRDQRQQVEMVGVPEEHLAGHAFHMYHLTSPDETVSFEFQHNVCGRSIYAEGTVDAVLFLAKKVQAKADKRIYNMIDVLREGKM 340
BLAST of NO03G05730 vs. NCBI_GenBank
Match: ERP31872.1 (dihydrodipicolinate reductase [Chitinivibrio alkaliphilus ACht1]) HSP 1 Score: 238.8 bits (608), Expect = 2.000e-59 Identity = 122/204 (59.80%), Postives = 149/204 (73.04%), Query Frame = 0 Query: 75 IAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQ--AGSEKKVYNMIDVLKAGAM 277 I+VDYTHPTAVN N Y RH FVMGTTGGDREKL DV+A G+ AVIAPNMAKQIVALQ L+TMA TFP ++ YTL+VVESHQ +KADTSGTAKA++ SF K+ E + ++ D Q GVP L GHAFHTY+++SPD +V F F HNV GR +Y EGT+DA VFL KQ AG+ ++V++MIDVL++G M Sbjct: 72 ISVDYTHPTAVNDNATFYIRHSRPFVMGTTGGDREKLHKDVSAAGLSAVIAPNMAKQIVALQYMLQTMAKTFPDLYKDYTLSVVESHQKTKADTSGTAKAIVDSFNKMGIHPITPEAIEKIREDAPAQERLGVPAEYLSGHAFHTYRVVSPDDTVAFSFSHNVCGRSIYGEGTMDAAVFLQKQIEAGTAERVFSMIDVLQSGTM 275
BLAST of NO03G05730 vs. NCBI_GenBank
Match: WP_052569186.1 (dihydrodipicolinate reductase [Chitinivibrio alkaliphilus]) HSP 1 Score: 238.8 bits (608), Expect = 2.000e-59 Identity = 122/204 (59.80%), Postives = 149/204 (73.04%), Query Frame = 0 Query: 75 IAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGFGVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQ--AGSEKKVYNMIDVLKAGAM 277 I+VDYTHPTAVN N Y RH FVMGTTGGDREKL DV+A G+ AVIAPNMAKQIVALQ L+TMA TFP ++ YTL+VVESHQ +KADTSGTAKA++ SF K+ E + ++ D Q GVP L GHAFHTY+++SPD +V F F HNV GR +Y EGT+DA VFL KQ AG+ ++V++MIDVL++G M Sbjct: 80 ISVDYTHPTAVNDNATFYIRHSRPFVMGTTGGDREKLHKDVSAAGLSAVIAPNMAKQIVALQYMLQTMAKTFPDLYKDYTLSVVESHQKTKADTSGTAKAIVDSFNKMGIHPITPEAIEKIREDAPAQERLGVPAEYLSGHAFHTYRVVSPDDTVAFSFSHNVCGRSIYGEGTMDAAVFLQKQIEAGTAERVFSMIDVLQSGTM 283
BLAST of NO03G05730 vs. NCBI_GenBank
Match: ERN20173.1 (hypothetical protein AMTR_s00066p00104940 [Amborella trichopoda]) HSP 1 Score: 237.7 bits (605), Expect = 4.500e-59 Identity = 129/229 (56.33%), Postives = 163/229 (71.18%), Query Frame = 0 Query: 51 NGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGF-GVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAK--QAGSEKKVYNMIDVLKAGAM 277 +G E ++ Q +L + D +I VDYT P AVN N +LY + L FVMGTTGGDR++L+ V IYAVIAP M KQ+VA QA +E MA FPGAF GYTL V+ESHQ+SK DTSGTAKA+ISSF K LG ++ + I+++RD + Q+ GVPE L GHAFH Y L SPDG+V F+F+HNV GR +YAEG+VDA +FL+K Q+ +EKK+YNMIDVL G M Sbjct: 59 HGPSERESIFQSVLEKFPD----VIVVDYTVPAAVNENAELYCKVGLPFVMGTTGGDRQRLLQTVQDANIYAVIAPQMGKQVVAFQAAMEIMAEQFPGAFAGYTLQVMESHQASKRDTSGTAKAIISSFQK-LGVSFEMGQ-IQLVRDPKMQMEMVGVPEEYLSGHAFHMYHLTSPDGTVSFEFQHNVCGRSIYAEGSVDAAIFLSKKVQSKAEKKLYNMIDVLCEGNM 281
BLAST of NO03G05730 vs. NCBI_GenBank
Match: XP_006858706.2 (4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic [Amborella trichopoda] >XP_020532006.1 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic [Amborella trichopoda]) HSP 1 Score: 237.7 bits (605), Expect = 4.500e-59 Identity = 129/229 (56.33%), Postives = 163/229 (71.18%), Query Frame = 0 Query: 51 NGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGF-GVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAK--QAGSEKKVYNMIDVLKAGAM 277 +G E ++ Q +L + D +I VDYT P AVN N +LY + L FVMGTTGGDR++L+ V IYAVIAP M KQ+VA QA +E MA FPGAF GYTL V+ESHQ+SK DTSGTAKA+ISSF K LG ++ + I+++RD + Q+ GVPE L GHAFH Y L SPDG+V F+F+HNV GR +YAEG+VDA +FL+K Q+ +EKK+YNMIDVL G M Sbjct: 116 HGPSERESIFQSVLEKFPD----VIVVDYTVPAAVNENAELYCKVGLPFVMGTTGGDRQRLLQTVQDANIYAVIAPQMGKQVVAFQAAMEIMAEQFPGAFAGYTLQVMESHQASKRDTSGTAKAIISSFQK-LGVSFEMGQ-IQLVRDPKMQMEMVGVPEEYLSGHAFHMYHLTSPDGTVSFEFQHNVCGRSIYAEGSVDAAIFLSKKVQSKAEKKLYNMIDVLCEGNM 338
BLAST of NO03G05730 vs. NCBI_GenBank
Match: OMO84361.1 (hypothetical protein CCACVL1_10854 [Corchorus capsularis]) HSP 1 Score: 237.7 bits (605), Expect = 4.500e-59 Identity = 126/219 (57.53%), Postives = 158/219 (72.15%), Query Frame = 0 Query: 61 QGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGF-GVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAK--QAGSEKKVYNMIDVLKAGAM 277 + +LA + LI VDYT P VN N +LY++ + FVMGTTGGDR++L V +YAVI+P M KQ+VA A +E MA FPGAF GY+L V+ESHQSSK DTSGTAKA+IS F K LG ++ + D I+MIRD + QLG GVPE L GHAFH Y L SPD +V F+F+HNV GR +YAEGTVDA++FLAK Q+ +EK++YNMIDVL+ G M Sbjct: 106 ESVLASLFNEYPNLIVVDYTVPDTVNDNAELYSKVGVPFVMGTTGGDRDRLYKTVEESNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVMESHQSSKVDTSGTAKAVISCFQK-LGVSFDM-DQIQMIRDPKQQLGMVGVPEEHLAGHAFHMYHLTSPDETVSFEFQHNVCGRSIYAEGTVDAVLFLAKKVQSKAEKRIYNMIDVLREGNM 322
BLAST of NO03G05730 vs. NCBI_GenBank
Match: XP_008243084.1 (PREDICTED: 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic [Prunus mume]) HSP 1 Score: 237.3 bits (604), Expect = 5.800e-59 Identity = 128/241 (53.11%), Postives = 168/241 (69.71%), Query Frame = 0 Query: 39 QTVRLVKGPLTGNGDEECDARLQGLLAGYRDSKTRLIAVDYTHPTAVNPNGKLYARHKLDFVMGTTGGDREKLMDDVAAGGIYAVIAPNMAKQIVALQAGLETMAATFPGAFEGYTLNVVESHQSSKADTSGTAKALISSFGKLLGKAYHVEDVIRMIRDREGQLGF-GVPEAGLGGHAFHTYQLLSPDGSVEFQFRHNVVGRRVYAEGTVDALVFLAKQ--AGSEKKVYNMIDVLKAGAM 277 QTV++ + +G E ++ L LL Y LI VD+T P+AVN N +LY + + FVMGTTGGDR++L V +YAVI+P M KQ+VA A +E MA FPGAF GY+L V+ESHQSSK DTSGTAKA+IS F K LG + +E I++IRD + Q+ GVPE L GHAFH Y L SPD +V F+F+HNV GR +YAEGTVDA++FLAK+ +G++K++YNM+DVL+ G M Sbjct: 118 QTVQVGATEIVVHGPSERESTLASLLEKY----PNLIVVDFTVPSAVNDNAELYGKVGVPFVMGTTGGDRDQLYKTVEDSKVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVMESHQSSKVDTSGTAKAVISCFQK-LGVCFDMEQ-IQLIRDTQQQIEMVGVPEEHLSGHAFHMYHLTSPDQTVSFEFQHNVCGRSIYAEGTVDAVIFLAKKVHSGTDKRIYNMMDVLREGNM 352 The following BLAST results are available for this feature:
BLAST of NO03G05730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05730 ID=NO03G05730|Name=NO03G05730|organism=Nannochloropsis oceanica|type=gene|length=2531bpback to top protein sequence of NO03G05730.3 >NO03G05730.3-protein ID=NO03G05730.3-protein|Name=NO03G05730.3|organism=Nannochloropsis oceanica|type=polypeptide|length=277bpback to top protein sequence of NO03G05730.2 >NO03G05730.2-protein ID=NO03G05730.2-protein|Name=NO03G05730.2|organism=Nannochloropsis oceanica|type=polypeptide|length=291bpback to top protein sequence of NO03G05730.1 >NO03G05730.1-protein ID=NO03G05730.1-protein|Name=NO03G05730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bpback to top Synonyms
Publications
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