NO03G05640, NO03G05640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05640 vs. NCBI_GenBank
Match: EWM30039.1 (hnh endonuclease [Nannochloropsis gaditana]) HSP 1 Score: 353.2 bits (905), Expect = 1.700e-93 Identity = 189/297 (63.64%), Postives = 216/297 (72.73%), Query Frame = 0 Query: 294 LSLPPDSSSQASIHHRDVDNSDEEDDGENDGFASLPASELRARLRSLGLPATGRTKSLLAARLRSSLRAQRLAAFPVGSTERYSDRRGKVNKADLPKGANGRALCRLCQRECPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTN--------GSXXXXXXAVGGS--GKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRILCVACHQTATAKLRERR 581 L L PDS SIH + + + EE A+ PA+ELRA LR+LG+PATGRTK+ LA RL + LRA+RLA FP ST+RYSDRRGKVNKADL +G +GRALCRLCQ+ECPKK NTFCSPACVHEHRLRTSGSYVRKCLLVRD+G+CALCA+D H +YL VRR A GWGG+G + LGG+QAVVDE V GT+LEGKVKVRGL G G + +RPRRPFNSGLFWHADHI+PVVEGGGL+GLENFR LCVACHQTATA+LR RR Sbjct: 301 LRLHPDS---PSIHAENGEENPEE-------LATRPAAELRAHLRALGVPATGRTKAQLAIRLHACLRARRLANFPSHSTDRYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKG-----------EKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRRR 576
BLAST of NO03G05640 vs. NCBI_GenBank
Match: XP_005855034.1 (hnh endonuclease, partial [Nannochloropsis gaditana CCMP526] >EKU21332.1 hnh endonuclease, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 322.0 bits (824), Expect = 4.100e-84 Identity = 174/281 (61.92%), Postives = 200/281 (71.17%), Query Frame = 0 Query: 294 LSLPPDSSSQASIHHRDVDNSDEEDDGENDGFASLPASELRARLRSLGLPATGRTKSLLAARLRSSLRAQRLAAFPVGSTERYSDRRGKVNKADLPKGANGRALCRLCQRECPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTN--------GSXXXXXXAVGGS--GKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRIL 565 L L PDS SIH + + + EE A+ PA+ELRA LR+LG+PATGRTK+ LA RL + LRA+RLA FP ST+RYSDRRGKVNKADL +G +GRALCRLCQ+ECPKK NTFCSPACVHEHRLRTSGSYVRKCLLVRD+G+CALC +D H +YL VRR A GWGG+G + LGG+QAVVDE V GT+LEGKVKVRGL G G + +RPRRPFNSGLFWHADHI+PVVEGGGL+GLENFR L Sbjct: 2 LRLHPDS---PSIHAENGEENPEE-------LATRPAAELRAHLRALGVPATGRTKAQLAIRLHACLRARRLANFPSHSTDRYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCTIDAHALYLHVRRTCWAAGWGGKG-----------EKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTL 261
BLAST of NO03G05640 vs. NCBI_GenBank
Match: CBN73807.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 159.1 bits (401), Expect = 4.600e-35 Identity = 104/272 (38.24%), Postives = 135/272 (49.63%), Query Frame = 0 Query: 331 SELRARLRSLGL--PATGRTKSLLAARLRSSLRAQRLA-------------AFPVGS------TERYSDRRGKVNKADLPKGANGRALCRLCQRECPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTNGSXXXXXXAVGGSGKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRILCVACHQTATAKLRERRA 582 +++R +LR G P +TK+ L LR +RA+ A P GS +R++ G V++A + +G G LCR C E P TFCS ACVHEHR+RT GSYVRKCLLVRD G+CA C +D +Y + R + +G SV+ +AV E+V GT EGK+ +G+ RRP G FWHADHIVPVV GGG L+N+R LCV CH AT +L RA Sbjct: 71 ADIRQQLRRRGYTPPRDRQTKAALLEELRGLVRAEGFAPPDAVVRNDTVTREGPEGSEGDGKAQQRWNPEAGWVDRATMERGERGYPLCRFCNEEVPSARRTFCSDACVHEHRIRTQGSYVRKCLLVRDGGQCAECGVDAAGLYKRARAAWICEG-----------------SVVVKREAVALEMV-GTPFEGKMPTKGMT---------------------RRP-TQGKFWHADHIVPVVRGGGQCSLKNYRTLCVPCHAAATKRLAGERA 302
BLAST of NO03G05640 vs. NCBI_GenBank
Match: WP_014784743.1 (HNH endonuclease [Terriglobus roseus] >AFL87174.1 HNH endonuclease [Terriglobus roseus DSM 18391]) HSP 1 Score: 107.8 bits (268), Expect = 1.200e-19 Identity = 70/199 (35.18%), Postives = 88/199 (44.22%), Query Frame = 0 Query: 381 GKVNKADLPKGANGRALCRLCQRECPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTNGSXXXXXXAVGGSGKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRILCVACHQTATAKLRER 580 G V++ D P+G NGR LCR C E PK+ TFCS CVHE +LR+ +Y+R + RD+G+C C +D ++ R RGAK +E +L K R + W ADHIVPVVEGGG L N R LCV CH+T TA LRER Sbjct: 10 GWVDRKDHPRGPNGRGLCRWCNLEVPKRRFTFCSDFCVHEWKLRSQPAYLRDHVYKRDKGRCCGCGIDTMAALRALK----------RSRGAKREE---------------------LMLHWGFKTRMRKS----------------------------LWDADHIVPVVEGGGECDLANIRTLCVRCHRTVTAALRER 149
BLAST of NO03G05640 vs. NCBI_GenBank
Match: WP_074652879.1 (HNH endonuclease [Terriglobus roseus] >SEB61230.1 HNH endonuclease [Terriglobus roseus]) HSP 1 Score: 107.5 bits (267), Expect = 1.600e-19 Identity = 69/199 (34.67%), Postives = 90/199 (45.23%), Query Frame = 0 Query: 381 GKVNKADLPKGANGRALCRLCQRECPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTNGSXXXXXXAVGGSGKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRILCVACHQTATAKLRER 580 G V++ D P+G NGR LCR C E PK+ TFCS CVHE +LR+ SY+R+ + RD+G+C C +D ++ R RG + +E + G + R R+ W ADHIVPVVEGGG L N R LC+ CH+TATA LRER Sbjct: 10 GWVDRKDHPRGPNGRGLCRWCNLEVPKRRFTFCSDFCVHEWKLRSQPSYLREHVYKRDKGRCCGCGIDTMSALRSLK----------RSRGPRREE--------------------------------------------LMRHWGFKTRIRKS-----LWDADHIVPVVEGGGECDLANIRTLCLRCHRTATAALRER 149
BLAST of NO03G05640 vs. NCBI_GenBank
Match: WP_022841911.1 (HNH endonuclease [Acidobacteriaceae bacterium TAA166]) HSP 1 Score: 107.1 bits (266), Expect = 2.100e-19 Identity = 68/200 (34.00%), Postives = 85/200 (42.50%), Query Frame = 0 Query: 381 GKVNKADLPKGANGRALCRLCQRE-CPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTNGSXXXXXXAVGGSGKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRILCVACHQTATAKLRER 580 G +ADLP G NG LCR CQ E K+ TFCS CVH+ RLRT Y+R + RDRG+CA+C +D Y ++R G + GL G K RR W ADHI+PV EGGG L+N R LC+ CH+ AT++LR R Sbjct: 10 GSARRADLPTGPNGLPLCRWCQLEILAKRRRTFCSDYCVHQWRLRTDPGYLRDQVFARDRGRCAVCRIDTVAAYAALKR-----------------------------------------ARGPARAAGLRLYGM------------KTIASRRS-----LWDADHILPVAEGGGQCDLDNLRTLCLLCHREATSQLRSR 151
BLAST of NO03G05640 vs. NCBI_GenBank
Match: WP_084080171.1 (HNH endonuclease [Edaphobacter aggregans]) HSP 1 Score: 103.2 bits (256), Expect = 3.000e-18 Identity = 66/200 (33.00%), Postives = 85/200 (42.50%), Query Frame = 0 Query: 381 GKVNKADLPKGANGRALCRLCQRE-CPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTNGSXXXXXXAVGGSGKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRILCVACHQTATAKLRER 580 G+ ++ +LP G NG LCR C E K+ TFCS CVH+ RLRT Y+R + RDRG+CA+C +D Y ++R G + GL G K RR W ADHI+PV EGGG L+N R LC+ CH+ ATA+LR R Sbjct: 10 GRASRHELPTGPNGLPLCRWCDLEILAKRRRTFCSDYCVHQWRLRTDPGYLRDQVFARDRGRCAVCHIDTVAAYAALKR-----------------------------------------ARGPARAAGLRLYGM------------KTVTSRRS-----LWDADHILPVAEGGGQCDLDNIRTLCLLCHREATAQLRAR 151
BLAST of NO03G05640 vs. NCBI_GenBank
Match: WP_026387118.1 (HNH endonuclease [Acidobacteria bacterium KBS 146]) HSP 1 Score: 102.1 bits (253), Expect = 6.600e-18 Identity = 68/200 (34.00%), Postives = 87/200 (43.50%), Query Frame = 0 Query: 381 GKVNKADLPKGANGRALCRLCQRE-CPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTNGSXXXXXXAVGGSGKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRILCVACHQTATAKLRER 580 G+ + LP G NG LCR C E ++ TFCS CVH+ RLRT Y+R + RDRG C++C +D YL ++ R RGA G L GM ++ RR W ADHI+PV EGGG L+N R LC+ CH+TATA+LR R Sbjct: 10 GRAQRESLPTGPNGLPLCRWCHLEIIARRRRTFCSDYCVHQWRLRTDPGYLRDQVFARDRGHCSVCKIDTVAAYLALK----------RARGAARAAG----LRLYGMASITS---------------------------------------RRS-----LWDADHIIPVAEGGGQCDLDNLRTLCLLCHRTATAELRTR 151
BLAST of NO03G05640 vs. NCBI_GenBank
Match: WP_089408740.1 (HNH endonuclease [Granulicella rosea] >SNT07873.1 HNH endonuclease [Granulicella rosea]) HSP 1 Score: 100.9 bits (250), Expect = 1.500e-17 Identity = 69/200 (34.50%), Postives = 87/200 (43.50%), Query Frame = 0 Query: 381 GKVNKADLPKGANGRALCRLCQRE-CPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTNGSXXXXXXAVGGSGKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRILCVACHQTATAKLRER 580 G+V L +G NG LCR C E K+ TFCS CVH+HRLRT Y+R + RDRG CALC D +Y ++ R RGA + G + + G+ T RR W ADHI+PV EGGG L+N R LC+ CH+ ATA+LR R Sbjct: 10 GRVEPHILARGPNGLPLCRWCDLEILAKRRRTFCSDYCVHQHRLRTDPGYLRDQVFARDRGLCALCQADTVAIYAALK----------RSRGAAREAG--------------------------LSIYGMKT-----------------IHARRS-----LWDADHILPVAEGGGQCDLDNLRTLCLPCHREATAQLRLR 151
BLAST of NO03G05640 vs. NCBI_GenBank
Match: WP_026448418.1 (HNH endonuclease [Acidobacteriaceae bacterium URHE0068]) HSP 1 Score: 100.5 bits (249), Expect = 1.900e-17 Identity = 66/199 (33.17%), Postives = 85/199 (42.71%), Query Frame = 0 Query: 381 GKVNKADLPKGANGRALCRLCQRECPKKVNTFCSPACVHEHRLRTSGSYVRKCLLVRDRGKCALCALDVHQMYLKVRRLILAQGWGGRGRGAKGKEGGWKDSVLGGMQAVVDEVVEGTVLEGKVKVRGLNTNGSXXXXXXAVGGSGKQQRPRRPFNSGLFWHADHIVPVVEGGGLQGLENFRILCVACHQTATAKLRER 580 G V++ +P+G NGR +CR C E P++ TFCS CVHE +LRT YVR+ + RDRG C+ C +D ++R RG K W G + R RR W ADHIVPV EGGG L+N R LC+ CH+ AT +LR R Sbjct: 10 GWVDRKSVPRGPNGRGICRWCSLEVPRRRFTFCSAFCVHEWKLRTQPGYVREKVYERDRGVCSGCGVDTLAASRQLRY--------SRGERRKALLLHW----------------------------------------------GLRTRTRRS-----LWDADHIVPVAEGGGECDLDNIRTLCLRCHRAATLELRRR 149 The following BLAST results are available for this feature:
BLAST of NO03G05640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05640 ID=NO03G05640|Name=NO03G05640|organism=Nannochloropsis oceanica|type=gene|length=1961bpback to top protein sequence of NO03G05640.1 >NO03G05640.1-protein ID=NO03G05640.1-protein|Name=NO03G05640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=630bpback to top Synonyms
Publications
|