NO03G05590, NO03G05590 (gene) Nannochloropsis oceanica

Overview
NameNO03G05590
Unique NameNO03G05590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2487
Alignment locationchr3:1602984..1605470 +

Link to JBrowse

Properties
Property NameValue
DescriptionSodium/potassium-transporting ATPase subunit alpha-2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1602984..1605470 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR023299ATPase_P-typ_cyto_domN
IPR036412HAD-like_sf
IPR023298ATPase_P-typ_TM_dom
IPR006068ATPase_P-typ_cation-transptr_C
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: PNR54902.1 (hypothetical protein PHYPA_005795 [Physcomitrella patens])

HSP 1 Score: 256.1 bits (653), Expect = 3.100e-64
Identity = 185/507 (36.49%), Postives = 254/507 (50.10%), Query Frame = 0 
Query:  134 FFRGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTSLTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLENGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRSVDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLLFLLAPL----PLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKL 637
            + +GAP++LL+   Y    G+   L    R QL E +      GLR++G+A +             GD S  ++ +      GF+AF+D VR  VAEA+ TCH AG+RV+M+TGDH  T  SIA   GIL                   +G + R  ++ VS    + +     E                              L+    VF R +P++KL +L  LQ         G+   V  TGDG NDA  LA ADVG+AMG+  D A+ AA IV   + F  +   L EGRRL AN RKALAFYLGAK  L++LF++  L    PLS +QII+LELFMD+GAST+F +EPAD D+M  PP   +  FF+ E++   L   L ++  VL+S            G     E  QS  F  WLL H+ LAL+LR+F +P+  KG FSNPA  VW  A + L    ++   L + L L  +  R+W  LT + + GT W+E  K+
Sbjct:  301 YMKGAPELLLELSTYALEDGR-YVLVENMRQQLEEQIWGAASAGLRLIGYAQSVTHRSEDVANKARGDPSSVTA-MEGTTFLGFMAFQDAVRPGVAEAVETCHQAGVRVIMVTGDHLKTGLSIASASGILD-----------------YEGFEGREDVAGVSCADVLLQCMAEEEI---------------------------QNLVAETCVFARTTPNDKLIILETLQ---------GSGKCVMATGDGFNDAPILAKADVGVAMGKGTDVAREAASIVFVDDNFAMVPFALAEGRRLLANLRKALAFYLGAKIGLIMLFIIGTLWKSFPLSAIQIIVLELFMDLGASTSFVMEPADTDIMRRPPLDSTKRFFNREIVGGILVSALCMIFTVLVSFAY---------GVYVHPETAQSSAFLAWLLAHVLLALNLRTFREPVYYKGFFSNPAMCVWLVAAVGLAATSSVSALLRRHLKLEVVPLRQWLVLTVICVCGTFWVEMAKI 743
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: XP_024373455.1 (calcium-transporting ATPase 1-like [Physcomitrella patens])

HSP 1 Score: 256.1 bits (653), Expect = 3.100e-64
Identity = 185/507 (36.49%), Postives = 254/507 (50.10%), Query Frame = 0 
Query:  134 FFRGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTSLTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLENGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRSVDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLLFLLAPL----PLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKL 637
            + +GAP++LL+   Y    G+   L    R QL E +      GLR++G+A +             GD S  ++ +      GF+AF+D VR  VAEA+ TCH AG+RV+M+TGDH  T  SIA   GIL                   +G + R  ++ VS    + +     E                              L+    VF R +P++KL +L  LQ         G+   V  TGDG NDA  LA ADVG+AMG+  D A+ AA IV   + F  +   L EGRRL AN RKALAFYLGAK  L++LF++  L    PLS +QII+LELFMD+GAST+F +EPAD D+M  PP   +  FF+ E++   L   L ++  VL+S            G     E  QS  F  WLL H+ LAL+LR+F +P+  KG FSNPA  VW  A + L    ++   L + L L  +  R+W  LT + + GT W+E  K+
Sbjct:  646 YMKGAPELLLELSTYALEDGR-YVLVENMRQQLEEQIWGAASAGLRLIGYAQSVTHRSEDVANKARGDPSSVTA-MEGTTFLGFMAFQDAVRPGVAEAVETCHQAGVRVIMVTGDHLKTGLSIASASGILD-----------------YEGFEGREDVAGVSCADVLLQCMAEEEI---------------------------QNLVAETCVFARTTPNDKLIILETLQ---------GSGKCVMATGDGFNDAPILAKADVGVAMGKGTDVAREAASIVFVDDNFAMVPFALAEGRRLLANLRKALAFYLGAKIGLIMLFIIGTLWKSFPLSAIQIIVLELFMDLGASTSFVMEPADTDIMRRPPLDSTKRFFNREIVGGILVSALCMIFTVLVSFAY---------GVYVHPETAQSSAFLAWLLAHVLLALNLRTFREPVYYKGFFSNPAMCVWLVAAVGLAATSSVSALLRRHLKLEVVPLRQWLVLTVICVCGTFWVEMAKI 1088
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: PTQ45076.1 (hypothetical protein MARPO_0016s0126 [Marchantia polymorpha])

HSP 1 Score: 248.4 bits (633), Expect = 6.400e-62
Identity = 198/637 (31.08%), Postives = 294/637 (46.15%), Query Frame = 0 
Query:   12 DVFDRAVLLSYILWTEEEFRP--------SLSAEVKSHLRRMIPPLLQHKASHASLLAEDPFDPSRKVSARAYRVRKGEREENGRGVDNXXXXXXXXXXXXXXVRNLLQYVXXXXXXXXXXXXXXXXXXVFFRGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTSLTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLENGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRSVDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLLFLLAPL----PLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKL 637
            D+FD+AVL  Y L +   F          + + ++K HL       L      AS +AE PFDPS K S+R ++            +D               VR ++                      + +GAP+VLL  C +    G    +    RH++ E +  +  EG R++ +A                  S   S+   A   GFL+F DP+R   A ++  C  AG+RV+M+TGDH  TA S+A+QVGI+ +                ++   +   IS +  + +                              T G +    L+    VF RA+  +KL +L +LQ              V  TGDG ND+  LA ADVG+AMG+  D A+ AA IV+  + F  + ++L EGRRL  N R+ALAFYLGAK   +LLF++  L    PLS LQIILLELFMD+G+S++F +EP D DLM   PRHPS  FFD EL+       +S+   VL S   +  H           E  Q+  F+ WL   + +A +LR+F +P+V+KG+F+N    +W  A + L +LL+      + L LV L+   W  +  +++VG+ W+E  K+
Sbjct:  554 DMFDQAVL--YALGSSVSFLGGSPGYGFLASNPDIKLHLENTYRTKLD-----ASFVAEVPFDPSLKFSSRTFQ------------IDPVLMNHATDAAVSSPVRPVM----------------------YIKGAPEVLLRHCAHALENGAVVPM-NSVRHKIIEQVTKVASEGHRLIAYA-------YNDVESKASKASNPFSVFERAIFLGFLSFIDPIREEAAASVQQCQRAGVRVIMVTGDHIETAASVAQQVGIIST---------------EQEEDSSDMSISCIDMHLA------------------------------TLGKEELQDLVMRTRVFARATATDKLLILESLQ---------ACAKTVMATGDGVNDSPILAQADVGVAMGKGTDVAREAASIVMMDDNFSMIPYSLAEGRRLLENLRRALAFYLGAKLGFILLFIMGTLWDRYPLSALQIILLELFMDLGSSSSFVMEPRDSDLMRRKPRHPSEKFFDFELVSGIFVAAISMFATVLTSFFYAIYH---------EKETAQTSVFFTWLFVQVLMAFNLRTFREPVVLKGIFTNMGINIWFIATVSLTILLSSSTFFQEHLSLVPLSTSHWLYIILMSIVGSCWIEFAKM 1078
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: GAO22081.1 (ATPase [Alicycliphilus sp. B1])

HSP 1 Score: 238.0 bits (606), Expect = 8.600e-59
Identity = 173/516 (33.53%), Postives = 248/516 (48.06%), Query Frame = 0 
Query:  133 VFFRGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTS---LTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLENGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRS-VDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLLFLLA-----PLPLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKLRRW 640
            +  +G+P+  L  C  +   G+ + LG   R  L ++ + +   GLRVLG A              G + S      +        GF   EDP RA   +A+ T  +AG+RV+M+TGDH  TAC+IAR+VGI                        T +P    +  +  ++  +                               A+L     VF R +P+ KL ++RALQ  G          VVAVTGDG NDA +L  A +G+ MGRS  D A+ AA +V+A + F  ++  +R GR L+AN RKA+ +YL AK AL+   L A     P+P  P+QIIL+ELFMD+GAS TF  EP + D+M   PR    PF D  ++   L GGLSL   VL+ G     H G        L   Q+  F  W++GH+ LA H+R+  QPL++   F+N  F++WA    LLV++  + P + Q L L   +   W+ + + AL+   W E WK  RW
Sbjct:  428 IALKGSPESTLAVCTTIRHEGRDQALGDAMRASLLQVAEGMAARGLRVLGLA----------QRVLGAEESAPGTADAAERDLVFLGFAGLEDPPRAEAPDAVRTLREAGVRVLMVTGDHPSTACAIARRVGI-----------------------DTSQPPVRGAELEKADDSQM-------------------------------ARLACQTDVFSRIAPEHKLRIVRALQANG---------EVVAVTGDGVNDAPALREAAIGVTMGRSGTDVAREAADLVLADDNFATVVEAVRTGRVLYANLRKAVRYYLAAKVALVFASLAAVLLKLPVPFDPVQIILMELFMDLGASVTFVAEPPENDVMARRPRDARQPFMDRSMVGGILFGGLSLGAAVLI-GYLGAHHLGA------GLAEAQTAAFAAWMIGHVVLAAHMRAERQPLLLTNPFANRPFVIWAVFAFLLVLVGTMVPAIRQQLHLSSPSASVWWMVIAAALIVPSWWEPWKWLRW 863
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: WP_063840215.1 (hypothetical protein [Alicycliphilus sp. B1])

HSP 1 Score: 238.0 bits (606), Expect = 8.600e-59
Identity = 173/516 (33.53%), Postives = 248/516 (48.06%), Query Frame = 0 
Query:  133 VFFRGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTS---LTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLENGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRS-VDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLLFLLA-----PLPLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKLRRW 640
            +  +G+P+  L  C  +   G+ + LG   R  L ++ + +   GLRVLG A              G + S      +        GF   EDP RA   +A+ T  +AG+RV+M+TGDH  TAC+IAR+VGI                        T +P    +  +  ++  +                               A+L     VF R +P+ KL ++RALQ  G          VVAVTGDG NDA +L  A +G+ MGRS  D A+ AA +V+A + F  ++  +R GR L+AN RKA+ +YL AK AL+   L A     P+P  P+QIIL+ELFMD+GAS TF  EP + D+M   PR    PF D  ++   L GGLSL   VL+ G     H G        L   Q+  F  W++GH+ LA H+R+  QPL++   F+N  F++WA    LLV++  + P + Q L L   +   W+ + + AL+   W E WK  RW
Sbjct:  451 IALKGSPESTLAVCTTIRHEGRDQALGDAMRASLLQVAEGMAARGLRVLGLA----------QRVLGAEESAPGTADAAERDLVFLGFAGLEDPPRAEAPDAVRTLREAGVRVLMVTGDHPSTACAIARRVGI-----------------------DTSQPPVRGAELEKADDSQM-------------------------------ARLACQTDVFSRIAPEHKLRIVRALQANG---------EVVAVTGDGVNDAPALREAAIGVTMGRSGTDVAREAADLVLADDNFATVVEAVRTGRVLYANLRKAVRYYLAAKVALVFASLAAVLLKLPVPFDPVQIILMELFMDLGASVTFVAEPPENDVMARRPRDARQPFMDRSMVGGILFGGLSLGAAVLI-GYLGAHHLGA------GLAEAQTAAFAAWMIGHVVLAAHMRAERQPLLLTNPFANRPFVIWAVFAFLLVLVGTMVPAIRQQLHLSSPSASVWWMVIAAALIVPSWWEPWKWLRW 886
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: OAE35074.1 (hypothetical protein AXG93_763s1070 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 237.7 bits (605), Expect = 1.100e-58
Identity = 198/665 (29.77%), Postives = 294/665 (44.21%), Query Frame = 0 
Query:   12 DVFDRAVLLSYILWTEEEFRP--------SLSAEVKSHLRRMIPPLLQHKASHASLLAEDPFDPSRKVSARAYRVRKGEREENGRGVDNXXXXXXXXXXXXXXVRNLLQYVXXXXXXXXXXXXXXXXXXVFFRGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTSLTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLENGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRSVDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLLFLLAPL--------------------------------PLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKL 637
            D+FD+AVL  Y L +   F          + + ++K HL       L      AS +AE PFDPS K S+R ++            +D               VR ++                      + +GAP+VLL  C +    G    +    RH++ E +  +  EG R++ +A                  S   S+   A   GFL+F DP+R   A ++  C  AG+RV+M+TGDH  TA S+A+QVGI+ +                ++   +   IS +  + +                              T G +    L+    VF RA+  +KL +L +LQ              V  TGDG ND+  LA ADVG+AMG+  D A+ AA IV+  + F  + ++L EGRRL  N R+ALAFYLGAK   +LLF++  L                                PLS LQIILLELFMD+G+S++F +EP D DLM   PRHPS  FFD EL+       +S+   VL S   +  H           E  Q+  F+ WL   + +A +LR+F +P+V+KG+F+N    +W  A + L +LL+      + L LV L+   W  +  +++VG+ W+E  K+
Sbjct:  554 DMFDQAVL--YALGSSVSFLGGSPGYGFLASNPDIKLHLENTYRTKLD-----ASFVAEVPFDPSLKFSSRTFQ------------IDPVLMNHATDAAVSSPVRPVM----------------------YIKGAPEVLLRHCAHALENGAVVPM-NSVRHKIIEQVTKVASEGHRLIAYA-------YNDVESKASKASNPFSVFERAIFLGFLSFIDPIREEAAASVQQCQRAGVRVIMVTGDHIETAASVAQQVGIIST---------------EQEEDSSDMSISCIDMHLA------------------------------TLGKEELQDLVMRTRVFARATATDKLLILESLQ---------ACAKTVMATGDGVNDSPILAQADVGVAMGKGTDVAREAASIVMMDDNFSMIPYSLAEGRRLLENLRRALAFYLGAKLGFILLFIMGTLWDSCCELETAALVGYTGFLKQILSSSGSSYRYPLSALQIILLELFMDLGSSSSFVMEPRDSDLMRRKPRHPSEKFFDFELVSGIFVAAISMFATVLTSFFYAIYH---------EKETAQTSVFFTWLFVQVLMAFNLRTFREPVVLKGIFTNMGINIWFIATVSLTILLSSSTFFQEHLSLVPLSTSHWLYIILMSIVGSCWIEFAKM 1106
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: KPL23069.1 (hypothetical protein AMJ93_05600 [Anaerolineae bacterium SM23_84])

HSP 1 Score: 226.9 bits (577), Expect = 2.000e-55
Identity = 173/512 (33.79%), Postives = 244/512 (47.66%), Query Frame = 0 
Query:  133 VFFRGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTSLTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLENGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMG-RSVDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLLFLLA-----PLPLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKLRR 639
            V  +GAP+ +L      W+    + L    +  + E    +  EGLRV+G+A                +++LT          G + F DP R+ V EAI  C  AGIR +++TGDH LTA ++ARQVG+             G G                       E   G+E                    DT G           +++ RA+P+ KL +++ALQ  G R         VA TGDG NDA +L AAD+G+AMG R  D A+ A  IV+  + F  +++ + EGR +FAN RK   +YL  K ALL   LLA     P+P +P+QIIL+ELFMD+ A+ TF +EPA+  LM  PPR P + F D  ++ +     + L   V      +   G         L   Q+  F  WLLGH+ LAL++RS  QP++  G+FSN   +VWA A ++ VV++ L P L   +  V L+  EW    S AL+GT WME  K  R
Sbjct:  433 VAVKGAPEAVLGRSTRGWIAQGEQALTAARQQAILEQAAQMACEGLRVIGYAEKAVDDGELSQHE--AESNLT--------FIGLIGFADPPRSQVREAIQACGMAGIRPILITGDHPLTARTVARQVGL------------DGAG-----------------------EALTGAELDVLSDD----------ALKDTVG---------EVSIYARATPEHKLRIVQALQERGER---------VAATGDGINDAPALVAADIGVAMGERGTDVAREAGDIVLTDDNFATIVNAIHEGRVVFANLRKGTRYYLTCKVALLSATLLATLLGVPVPFAPVQIILMELFMDLAAAATFVVEPAEAGLMRHPPRDPRVRFMDRAMIASIFISAVGLFAAVSTVYLFTWYRGA-------DLARAQTAAFVTWLLGHVLLALNMRSESQPVLQLGLFSNRLMVVWATATVVFVVVITLAPGLHAAVKTVSLSAGEWALAVSTALLGTSWMEALKWLR 864
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: GAP15713.1 (cation transport ATPase [Longilinea arvoryzae])

HSP 1 Score: 218.8 bits (556), Expect = 5.400e-53
Identity = 161/509 (31.63%), Postives = 243/509 (47.74%), Query Frame = 0 
Query:  133 VFFRGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTSLTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLE---NGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRS-VDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLL-----FLLAPLPLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWME 633
            V  +GAP+ +L +C       +        +  + + +D +  +GLRVL  A                D  +  S L   A  G +  +DP R  V +AI TC  AG+R +M+TGDH LTA +IARQVG+                                       +G  G                 VV  P+     +D +L E     ++F RA+P+ KL +++ALQ  G R         VAVTGDG NDA +LAAAD+G+AMG +  D A+ A  +V+A + F  +LH + EGR +F N +K + +YL  K AL+++      LL P+P +P+QIIL+ELFMD+ A+ +F +E  + DL+   PR P   F D  ++   L   L L + +      +             +   Q+  F+GWL+GH+ LA +LRS  QP+   G+ SN   L WAGAV + ++L+++ P   Q++    LT  +W  +     +GT WME
Sbjct:  431 VAVKGAPESILPQCILKLDGKKVVSFDTAAKQAVLDCVDGMAADGLRVLALAERTLDAENL-------DLEIVESGL---AFIGLVGLQDPPRPEVRQAIATCRRAGVRAIMITGDHPLTARAIARQVGL---------------------------------------DGDFG-----------------VVTGPEL-DQLSDRELKETVRRVSIFARATPEHKLRIVQALQALGER---------VAVTGDGVNDAPALAAADIGVAMGETGTDVAREAGDLVLADDNFTTILHAVEEGRLIFENLKKGVRYYLACKVALIMINLLPTLLLVPVPFAPVQIILMELFMDLMAAASFVVEGPESDLLERKPRDPKAKFMDGAMIGGILTSALGLFIAITTVYLVT-------WYNTHDIAVSQTTAFFGWLIGHVLLAFNLRSERQPVFQAGLSSNRMMLAWAGAVAVFLLLVSVIPGARQLMKAAPLTGSQWSMILIATFIGTFWME 856
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: WP_083522676.1 (hypothetical protein [Longilinea arvoryzae])

HSP 1 Score: 218.8 bits (556), Expect = 5.400e-53
Identity = 161/509 (31.63%), Postives = 243/509 (47.74%), Query Frame = 0 
Query:  133 VFFRGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTSLTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLE---NGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRS-VDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLL-----FLLAPLPLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWME 633
            V  +GAP+ +L +C       +        +  + + +D +  +GLRVL  A                D  +  S L   A  G +  +DP R  V +AI TC  AG+R +M+TGDH LTA +IARQVG+                                       +G  G                 VV  P+     +D +L E     ++F RA+P+ KL +++ALQ  G R         VAVTGDG NDA +LAAAD+G+AMG +  D A+ A  +V+A + F  +LH + EGR +F N +K + +YL  K AL+++      LL P+P +P+QIIL+ELFMD+ A+ +F +E  + DL+   PR P   F D  ++   L   L L + +      +             +   Q+  F+GWL+GH+ LA +LRS  QP+   G+ SN   L WAGAV + ++L+++ P   Q++    LT  +W  +     +GT WME
Sbjct:  465 VAVKGAPESILPQCILKLDGKKVVSFDTAAKQAVLDCVDGMAADGLRVLALAERTLDAENL-------DLEIVESGL---AFIGLVGLQDPPRPEVRQAIATCRRAGVRAIMITGDHPLTARAIARQVGL---------------------------------------DGDFG-----------------VVTGPEL-DQLSDRELKETVRRVSIFARATPEHKLRIVQALQALGER---------VAVTGDGVNDAPALAAADIGVAMGETGTDVAREAGDLVLADDNFTTILHAVEEGRLIFENLKKGVRYYLACKVALIMINLLPTLLLVPVPFAPVQIILMELFMDLMAAASFVVEGPESDLLERKPRDPKAKFMDGAMIGGILTSALGLFIAITTVYLVT-------WYNTHDIAVSQTTAFFGWLIGHVLLAFNLRSERQPVFQAGLSSNRMMLAWAGAVAVFLLLVSVIPGARQLMKAAPLTGSQWSMILIATFIGTFWME 890
[Close]
BLAST of NO03G05590 vs. NCBI_GenBank
Match: WP_051074196.1 (hypothetical protein [Effusibacillus pohliae])

HSP 1 Score: 208.0 bits (528), Expect = 9.600e-50
Identity = 163/519 (31.41%), Postives = 247/519 (47.59%), Query Frame = 0 
Query:  136 RGAPDVLLDECEYVWVRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATXXXXXXXXXXXXGGDTSLTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQLTACSIARQVGILPSLXXXXXXXXSGKGXKARKGKKTRRPISSVSAYQSVEEGGVGSEXXXXXXXXXXXXEHFVVVCPDTPGWQADAKLLENGAVFCRASPDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMGRS-VDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSALLLLFLLA-----PLPLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSLPFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLYFYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALFPPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKLRRWYGPGGSHAK 649
            +GAP+ LL   E+V   GQ   + +  R ++ +  + L  +G RVLG A                ++ L           G +A  DP R    +A+     AG+RVVM+TGDH  TA +IA +VGI                 K   G++  R ++     Q V+E                                         +VF R +P+ KL ++RA Q +G          +VAVTGDG ND  +L  A VG+AMG++  D AK +A +V+A + F  +   +REGR+LF N  KA+ +YL AK AL+     A      +P SP+QII+LELFMD+GAST+FT E ++ D++   PR    PF D  +L    +GGLSL + V+++   S   G         + + Q++ F  W++GH+ LAL +RS  +PL+  G+F+N    VW  + +  ++L    P L ++L L  +  +EW  + + A++   WME  K  RW    G   K
Sbjct:  464 KGAPEQLLSLAEHVVWSGQIVPMAQAFRTEIEQQANILASKGYRVLGLAFKEQPVSFSEMTRHEAESDL--------VFLGLVALLDPPRLDAEDAVRDLQQAGVRVVMITGDHPETARTIASKVGI--------------DSEKTMVGREIER-MTDEDLRQRVQE----------------------------------------ISVFARTTPEHKLRIVRAFQEQG---------EMVAVTGDGVNDGPALKEAAVGIAMGKTGTDVAKESADMVLADDRFSTITVAVREGRKLFENLFKAVRYYLAAKVALISSTFFAGVAGLAMPFSPIQIIVLELFMDLGASTSFTAERSEEDVIKPSPRRTDQPFMDRTMLTGIFSGGLSLGVAVIVAYVWSLQAGA-------DVRHAQTVAFATWMIGHLILALLMRSLREPLIHLGIFTNKTMWVWIVSAIGFLMLAVWVPSLRELLHLTPIHPQEWIVVITSAVLAPLWMEVGKWIRWQSEVGYSEK 903
The following BLAST results are available for this feature:
BLAST of NO03G05590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PNR54902.13.100e-6436.49hypothetical protein PHYPA_005795 [Physcomitrella ... [more]
XP_024373455.13.100e-6436.49calcium-transporting ATPase 1-like [Physcomitrella... [more]
PTQ45076.16.400e-6231.08hypothetical protein MARPO_0016s0126 [Marchantia p... [more]
GAO22081.18.600e-5933.53ATPase [Alicycliphilus sp. B1][more]
WP_063840215.18.600e-5933.53hypothetical protein [Alicycliphilus sp. B1][more]
OAE35074.11.100e-5829.77hypothetical protein AXG93_763s1070 [Marchantia po... [more]
KPL23069.12.000e-5533.79hypothetical protein AMJ93_05600 [Anaerolineae bac... [more]
GAP15713.15.400e-5331.63cation transport ATPase [Longilinea arvoryzae][more]
WP_083522676.15.400e-5331.63hypothetical protein [Longilinea arvoryzae][more]
WP_051074196.19.600e-5031.41hypothetical protein [Effusibacillus pohliae][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05590.1NO03G05590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100718g4gene615Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05590.1NO03G05590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05590 ID=NO03G05590|Name=NO03G05590|organism=Nannochloropsis oceanica|type=gene|length=2487bp
ATGCCGGCTACGCCGATGGTGCCGGACATTCCTGACGTCTTTGACCGGGC
GGTGTTGCTGTCGTACATCCTGTGGACCGAGGAGGAGTTTCGTCCTTCCC
TTTCCGCAGAGgtatggactgagaaagaggaaagggagagagggactgat
gtgcgtggccgattcgaaattgttaccgcaccaatttatccctctctcct
tccctccctccctccctcccttcctcatctaaaagataaacttgcccgca
ccctgcactctacaaaagttctcctcggtctcgaggccttccatatctcc
cactcaccctccctccttttcttcctccctccctttctccctccgtccag
GTGAAGAGCCATCTGCGGAGGATGATACCACCGCTTCTCCAGCACAAGGC
CTCTCACGCCTCCCTCCTCGCTGAGGATCCCTTCGACCCCTCCCGAAAGG
TTTCCGCCAGGGCGTATCGTGTGAGGAAGGGAGAGAGGGAGGAGAATGGG
AGAGGGGTAGATAATCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGGATGGTCCGGAATCTTTTGCAGTACGTAGGGGTACGAGGAGGAGGAG
GGAAGGGAGAAGGGGGAGGGGAGGGGAAGGTGAAGGTGTTCTTCCGAGGG
GCGCCGGACGTGCTGTTGGACGAGTGTGAGTATGTGTGGGTGCGCGGACA
GCCCCGGCGGTTGGGGAGGGAAGAGCGTCACCAGCTGGCCGAACTGTTGG
ACACTTTGTGTGGAGAGGGGTTGCGCGTGCTCGGCTTTGCTGCCACTACC
ACTGCAGCCGCTGCTGTCGGTGCGGCAGGGAAGGGTGGAGATACCTCCCT
CACCTCCTCCCTCCTTCCCTCCGCGGCCATTACGGGCTTCCTCGCCTTCG
AAGACCCCGTCCGCGCGTCGGTGGCCGAGGCAATCCACACCTGCCACGAC
GCCGGTATACGCGTTGTGATGCTCACTGGTGACCATCAGCTCACCGCCTG
CTCCATCGCCCGCCAGGTGGGCATCCTTCCCTCCCTTCCTCCGTCCCTCC
CTCCTTCCTCTTCAGGCAAGGGAGGGAAGGCAAGAAAGGGGAAAAAAACT
CGGCGGCCCATATCCTCTGTGTCCGCGTACCAGTCCGTGGAAGAGGGAGG
AGTGGGGTCCGAGGCCGGGACGGAGGCAGGGACGGAGGGTGGGAGGGAAG
AGCACTTCGTGGTGGTGTGCCCGGATACACCCGGGTGGCAAGCAGACGCG
AAGCTGCTCGAGAATGGAGCTGTGTTTTGCCGCGCAAGCCCTGACGAGAA
ACTTGCCTTGCTGCGGGCGTTGCAGAGAGAGGGGGGGAGGGAAGGAGGGA
GGGGGGCGAGGCACGTGGTGGCGGTGACGGGGGATGGCGCGAATGACGCG
CTGAGTTTGGCAGCGGCGGATGTGGGGCTGGCGATGGGGAGgtacgtcgg
gggaaagggatggaaggaaaagaggtgcgcgctagtacttccatacatat
ttatgtatgagtgtgcaagcatggcccgaggcatttttttccttctccac
ctcaacctcctcctctttccctcccctccctcctcccagGAGCGTCGACC
AGGCCAAGGCCGCGGCCGGCATCGTGGTGGCCCACGAGGAGTTTCCTGCC
CTTCTACACACCCTGAGGGAAGGGCGTCGCCTCTTTGCCAACTTCCGCAA
AGCCCTCGCATTCTACCTCGGCGCCAAGTCCGCCCTCCTCCTCCTTTTCC
TCCTCGCCCCTCTCCCCCTCTCCCCCCTTCAGATCATCCTCCTCGAGCTC
TTCATGGACGTCGGGGCCTCTACGACCTTCACGCTTGAACCTGCCGACGG
CGATCTCATGCTCATCCCTCCTCGCCACCCTTCCCTCCCCTTCTTTGACG
ACGAGCTCCTCCAGGCCACGCTGGCAGGAGGGCTCTCCCTCCTCCTCGTC
GTTCTCCTTTCTGGAGGCGCGTCTGATGGGCATGGCGGGAGGGAGGGAGG
GAGGATGGACGCATTAGAGTACAGGCAATCCCTCTACTTTTACGGGTGGC
TGCTTGGGCATATCTTCCTGGCCTTGCACCTGCGGTCCTTCCATCAGCCC
CTTGTGGTCAAGGGCGTTTTCTCCAACCCCGCCTTCCTTGTGTGGGCAGG
GGCTGTCCTCCTCCTTGTCGTCCTCCTCGCCCTCTTCCCCCCCCTCGGTC
AAGTTCTTGGCCTGGTGGGCTTGACCCGGCGAGAATGGTTTCGTCTGACT
TCGCTGGCTCTCGTGGGCACGGGATGGATGGAAGGATGGAAGCTGAGGAG
ATGGTATGGGCCAGGGGGTTCTCACGCGAAGGAGACAGCGATCTTGATGA
GAAGGAGGAGAGGTAGGGAGGAGAGCGAGGAGAATCACCAGGTCGTGGTC
GTCAGAGAGGGGGCAGCGAGGATTGTGGCAGCAGCAAAAGCGGGGGGACC
GTCGATGGTTACGGAAAAGGATCGCTTGTTAGGGTAG
back to top

protein sequence of NO03G05590.1

>NO03G05590.1-protein ID=NO03G05590.1-protein|Name=NO03G05590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=700bp
MPATPMVPDIPDVFDRAVLLSYILWTEEEFRPSLSAEVKSHLRRMIPPLL
QHKASHASLLAEDPFDPSRKVSARAYRVRKGEREENGRGVDNRGGGGGGG
GGGGGMVRNLLQYVGVRGGGGKGEGGGEGKVKVFFRGAPDVLLDECEYVW
VRGQPRRLGREERHQLAELLDTLCGEGLRVLGFAATTTAAAAVGAAGKGG
DTSLTSSLLPSAAITGFLAFEDPVRASVAEAIHTCHDAGIRVVMLTGDHQ
LTACSIARQVGILPSLPPSLPPSSSGKGGKARKGKKTRRPISSVSAYQSV
EEGGVGSEAGTEAGTEGGREEHFVVVCPDTPGWQADAKLLENGAVFCRAS
PDEKLALLRALQREGGREGGRGARHVVAVTGDGANDALSLAAADVGLAMG
RSVDQAKAAAGIVVAHEEFPALLHTLREGRRLFANFRKALAFYLGAKSAL
LLLFLLAPLPLSPLQIILLELFMDVGASTTFTLEPADGDLMLIPPRHPSL
PFFDDELLQATLAGGLSLLLVVLLSGGASDGHGGREGGRMDALEYRQSLY
FYGWLLGHIFLALHLRSFHQPLVVKGVFSNPAFLVWAGAVLLLVVLLALF
PPLGQVLGLVGLTRREWFRLTSLALVGTGWMEGWKLRRWYGPGGSHAKET
AILMRRRRGREESEENHQVVVVREGAARIVAAAKAGGPSMVTEKDRLLG*
back to top
Synonyms
Publications