NO03G05570, NO03G05570 (gene) Nannochloropsis oceanica

Overview
NameNO03G05570
Unique NameNO03G05570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4933
Alignment locationchr3:1595202..1600134 -

Link to JBrowse

Properties
Property NameValue
DescriptionFad-dependent pyridine nucleotide-disulfide oxidoreductase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1595202..1600134 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR015904Sulphide_quinone_reductase
IPR023753Pyr_nucl-diS_OxRdtase_FAD/NAD
Homology
BLAST of NO03G05570 vs. NCBI_GenBank
Match: EWM29872.1 (fad-dependent pyridine nucleotide-disulfide oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 486.9 bits (1252), Expect = 7.300e-134
Identity = 246/457 (53.83%), Postives = 319/457 (69.80%), Query Frame = 0
Query:   33 RLVRTLASSPSLPTT---------GERHRVLILGGGTAGVGTAAQLKNAGVE--DICIVEPSDVHYYQPGWTFVGAGIFDIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTG-KLFFPDQGEPSKFYFWVKQHLFPYVYWTLFPRGKWFGRQLLTPFDFSEADAK 478
            R V TL +SP   T+            H++LILGGGT G G+AA L N G++  DICIVEP+  HYYQP WT VGAGIFD   + R  + +IP+GV W +  A+ I PE N V  A G  + +DYLIVATG++CDW+KIPGL +AL     S VCSNYHP+YA NTW  ++ LS     G+A+FTQP   VKCGGAPQKIMW+ +D+LR+  +R   DI+F +P      FGV  Y  VL +E+ ARGV    +T+LV V+ E++EATF+ +   K+G+E T+P+AMLHVTPPMS P+ LK S L +  GFV+VDK T QH +YPNVFALGDS   S+LPTSKTMAA+   APV+ HNL RVM+GK+ +A YDG++SCPI L YD+LL+TEF+Y   PQETFT   L F DQG+PS F+F VK+++FP+VYW LF +G+W+G +L+   D+SEAD +
Sbjct:   42 RSVFTLVASPLSATSTANDINSGPTSHHKILILGGGTGGCGSAAHLINEGMQAADICIVEPASTHYYQPLWTLVGAGIFDRATSARPMSDIIPKGVAWARDAASKIDPEINTVQCASGRQLTYDYLIVATGLQCDWDKIPGLQDALHNSETSHVCSNYHPEYAENTWRVLRGLS----EGSALFTQPPSPVKCGGAPQKIMWLADDYLRRNNRRNAVDINFFMPQKV--YFGVPRYAEVLESESKARGVGFVFETLLVGVNGERREATFQRV---KDGSEYTLPYAMLHVTPPMSAPDFLKTSPLADPKGFVEVDKYTTQHVRYPNVFALGDS---SSLPTSKTMAAITGQAPVLVHNLLRVMRGKRATATYDGFTSCPIVLGYDKLLMTEFVYDCVPQETFTKIPLPFLDQGKPSFFFFLVKKYVFPFVYWNLFMKGRWYGSRLIFKPDYSEADRR 486          
BLAST of NO03G05570 vs. NCBI_GenBank
Match: XP_005853537.1 (fad-dependent pyridine nucleotide-disulfide oxidoreductase [Nannochloropsis gaditana CCMP526] >EKU22825.1 fad-dependent pyridine nucleotide-disulfide oxidoreductase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 411.4 bits (1056), Expect = 3.900e-111
Identity = 202/369 (54.74%), Postives = 266/369 (72.09%), Query Frame = 0
Query:  110 ASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTG-KLFFPDQGEPSKFYFWVKQHLFPYVYWTLFPRGKWFGRQLLTPFDFSEADAK 478
            + +IP+GV W +  A+ I PE N V  A G  + +DYLIVATG++CDW+KIPGL +AL     S VCSNYHP+YA NTW  ++ LS     G+A+FTQP   VKCGGAPQKIMW+ +D+LR+  +R   DI+F +P      FGV  Y  VL +E+ ARGV    +T+LV V+ E++EATF+ +   K+G+E T+P+AMLHVTPPMS P+ LK S L +  GFV+VDK T QH +YPNVFALGDS   S+LPTSKTMAA+   APV+ HNL RVM+GK+ +A YDG++SCPI L YD+LL+TEF+Y   PQETFT   L F DQG+PS F+F VK+++FP+VYW LF +G+W+G +L+   D+SEAD +
Sbjct:    2 SDIIPKGVAWARDAASKIDPEINTVQCASGRQLTYDYLIVATGLQCDWDKIPGLQDALHNSETSHVCSNYHPEYAENTWRVLRGLS----EGSALFTQPPSPVKCGGAPQKIMWLADDYLRRNNRRNAVDINFFMPQKV--YFGVPRYAEVLESESKARGVGFVFETLLVGVNGERREATFQRV---KDGSEYTLPYAMLHVTPPMSAPDFLKTSPLADPKGFVEVDKYTTQHVRYPNVFALGDS---SSLPTSKTMAAITGQAPVLVHNLLRVMRGKRATATYDGFTSCPIVLGYDKLLMTEFVYDCVPQETFTKIPLPFLDQGKPSFFFFLVKKYVFPFVYWNLFMKGRWYGSRLIFKPDYSEADRR 358          
BLAST of NO03G05570 vs. NCBI_GenBank
Match: WP_085215989.1 (NAD(P)/FAD-dependent oxidoreductase [Methylomagnum ishizawai] >SMF97175.1 sulfide:quinone oxidoreductase [Methylomagnum ishizawai])

HSP 1 Score: 360.5 bits (924), Expect = 7.900e-96
Identity = 184/403 (45.66%), Postives = 254/403 (63.03%), Query Frame = 0
Query:   51 HRVLILGGGTAGVGTAAQLKNAGVEDICIVEPSDVHYYQPGWTFVGAGIFDIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEY-NPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTGKLFFPDQGEPSKFYFWVKQHLFPYVYW 453
            HRV+++GGG AG+G AA+L  AG++D+ IVEPS+ HYYQP WTFVG G+   E + R  A +IP+G  WI+  AA+  P +N +   GG+ + +DYL+V  G++ DW KI GL EAL K   +GVCSNY    AP TW  ++      + GNA+FT P   +KC GAPQKIM++ ED+ RK G R+   + +      P +F V +Y N ++      RG++ + +  LV + AE KEA F+       G E+  P+ M+HV PPMS P+ +K+S L N  G+VDVDKA+LQH +YPNVF+LG   DAS+LPTSKT AA+ A APV+  NL  V+ G QP+  YDGY+SCP+   Y RL+L EF Y  KP+ETF       DQ +     + +K++  P +YW
Sbjct:    7 HRVVVVGGGAAGLGVAARLLRAGIKDVAIVEPSENHYYQPFWTFVGGGVVSREQSVRPMAGLIPKGATWIKDAAASFDPANNSLATQGGKTLNYDYLVVCPGLQIDWGKIKGLPEALGK---NGVCSNYGYDLAPITWDNIKNF----QGGNAVFTFPPPPIKCAGAPQKIMYLAEDYFRKHGLRDKTRVLYY--CATPTLFSVPKYANALMEQAVGPRGIETFFKHNLVEIRAESKEAVFQ---NADSGEEVVQPYDMIHVVPPMSSPDFIKQSPLANAGGWVDVDKASLQHTRYPNVFSLG---DASSLPTSKTAAAIRAQAPVLEANLLAVINGGQPTLAYDGYTSCPLVTGYGRLILAEFDYDLKPKETFPF-----DQSKERLSMYLLKRYAIPMIYW 389          
BLAST of NO03G05570 vs. NCBI_GenBank
Match: WP_013034672.1 (NAD(P)/FAD-dependent oxidoreductase [Nitrosococcus halophilus] >ADE16823.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Nitrosococcus halophilus Nc 4])

HSP 1 Score: 360.1 bits (923), Expect = 1.000e-95
Identity = 190/417 (45.56%), Postives = 261/417 (62.59%), Query Frame = 0
Query:   49 ERHRVLILGGGTAGVGTAAQL-KNAGVE--DICIVEPSDVHYYQPGWTFVGAGIFDIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTGKLFFPDQGEPSKFYFWVKQHLFPYVYWTLFPRG-KWF 462
            + HR+LI+GGGTAG+  AA L + AG +  DI I+EPS+ HYYQP +T VGAG + ++ T+R+ +S+IP  V WI+    +  P +N+VTL+ G  +G+DYL+V  G+  +WE I GL E + K   +GVCSNY P YAP TW  VQ+L  G +   A+FTQP    KC GAPQKI ++  DHLRKKG  ++ D++F    PA  MFGV  +   L+      G+    Q  L++VD EKK+ATF  +GGEK G +IT+ F +LHVTPP S PEV+K S L NE+G+VDV K ++QH +Y NVFALG   DA + P SKT AA+   APVV  NL  ++ G +    YDGY SCP+  +Y ++++ EF+YG K   TF       D  +     +W+K    P +YW    +G +WF
Sbjct:    5 QHHRILIVGGGTAGITVAASLRRKAGGKDLDIAIIEPSESHYYQPAFTLVGAGAYPLDKTRRSESSLIPSKVEWIRDTVTSFEPNNNQVTLSSGGLVGYDYLVVCPGLVLNWENIQGLAETIGK---NGVCSNYSPDYAPYTWECVQKLEKGAK---AVFTQPPMPFKCPGAPQKIAYLAADHLRKKGILDDCDLYFCNHGPA--MFGVPLFARELDKVVARYGIHANFQHNLIAVDGEKKQATFEVVGGEKTGQKITLDFDLLHVTPPQSPPEVVKSSPLANETGYVDVHKHSMQHTQYKNVFALG---DAGSTPNSKTAAAIRKQAPVVVKNLLHLIGGGELEEGYDGYGSCPLTTAYGKVIMAEFVYGGKVTPTFP-----LDPRKERWMNWWIKTTGLPLMYWHYMLKGHEWF 405          
BLAST of NO03G05570 vs. NCBI_GenBank
Match: WP_013628819.1 (NAD(P)/FAD-dependent oxidoreductase [Rubinisphaera brasiliensis] >ADY60095.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Rubinisphaera brasiliensis DSM 5305])

HSP 1 Score: 359.0 bits (920), Expect = 2.300e-95
Identity = 187/410 (45.61%), Postives = 261/410 (63.66%), Query Frame = 0
Query:   51 HRVLILGGGTAGVGTAAQLKNAGVE-DICIVEPSDVHYYQPGWTFVGAGIFDIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTGKLFFPDQGEPSKFYFWVKQHLFPYVYWTLFPRGK 460
            H+VLI+GGGTAG+  AA+L NA  + D+ I+EPS+ HYYQP WT VG GIF  EA++R   ++IP GVRWI+   A   P +N++T  GG+   +DYLIVA G++ +W+++ GL +AL    + GVCSNY  +   +TW  +Q L    ++G A+FTQPAGAVKCGGAPQKI ++ EDH R+ G R+N  + F       R+F V+EY   L      +G++   +  LV V +  KEA +R +  E+   EI +P+ +LHVTPPMS P+ +  S L +E+G+VDVDK TLQH ++ NVF+LG   DAS+LPTSKT AA+   APV+  NL     G++P+A YDGY+SCP+   YD L+L EF Y   P ETF       +Q +     F +K++  P +YW    RG+
Sbjct:    4 HQVLIVGGGTAGITVAARLHNAQPDLDVAIIEPSEKHYYQPLWTLVGGGIFPPEASERAEENLIPYGVRWIKDTVAEFAPAENQLTTRGGDEYSYDYLIVAPGIQINWDQVKGLKDAL---GQDGVCSNYSFQTVGSTWKFIQEL----KQGTALFTQPAGAVKCGGAPQKICYLAEDHFRRAGVRDNITVMFT--SAGARLFSVDEYRVTLEKVVARKGIETRFRHNLVEVRSASKEAIYRHMDTEE---EIVIPYDLLHVTPPMSAPDFVSASPLASEAGWVDVDKHTLQHTRFDNVFSLG---DASSLPTSKTGAAIRKQAPVLVENLLAAKNGQKPTAAYDGYTSCPVVTGYDSLVLAEFDYSGHPAETFPF-----NQAQERFSMFMLKKYGLPALYWHGMLRGR 393          
BLAST of NO03G05570 vs. NCBI_GenBank
Match: WP_026609605.1 (NAD(P)/FAD-dependent oxidoreductase [Methylocaldum szegediense])

HSP 1 Score: 358.2 bits (918), Expect = 3.900e-95
Identity = 183/412 (44.42%), Postives = 260/412 (63.11%), Query Frame = 0
Query:   51 HRVLILGGGTAGVGTAAQLKNAGVEDICIVEPSDVHYYQPGWTFVGAGIFDIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEY-NPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTGKLFFPDQGEPSKFYFWVKQHLFPYVYWTLFPRG-KW 461
            HRV+++GGG AG+G AA++ +AGV+D+ I+EPSD HYYQP WTFVG G+ + E + +  A +IP+G  WIQ  A    P++N V   GG+ +G+DYL+V  G++ DW+KIPG+ EAL K   +GVCSNY      +TW  ++        GNA+FT P   +KC GAPQKIM++ ED+ RK+G R+   + +      P +F   +Y   ++      R ++ + +  LV +  + KEA F+ +     G  +  P+ M+HV PPMS P+ LK+S L NE G+VDV+K TLQH +YPNVF+LG   DAS+LPTSKT AA+ A +PV+  NL  VM G QP A+YDGY+SCP+   Y +L+L EF Y  KP+ETF       DQG+     + +K+++ P +YW    RG KW
Sbjct:    7 HRVVVIGGGAAGLGIAARMLHAGVKDVAIIEPSDKHYYQPFWTFVGGGVVNREQSVKPMADLIPKGAAWIQDAAEEFDPDNNLVKTRGGKQVGYDYLVVCPGLQIDWDKIPGVKEALGK---NGVCSNYSYDTVNSTWENIRNFKG----GNAVFTFPPPPIKCAGAPQKIMYLAEDYFRKQGIRDKSRVVYY--CATPTIFSAPKYATSLMEQVVKPRNIEVHFKHNLVELRPDSKEAVFKNL---DTGENVVQPYDMIHVVPPMSAPDFLKKSPLGNEGGWVDVNKETLQHVRYPNVFSLG---DASSLPTSKTAAAIRAQSPVLAANLLSVMNGGQPVAKYDGYTSCPLITGYGKLILAEFDYDLKPKETFPF-----DQGKERYSMYLLKRYIIPVIYWKGLIRGYKW 398          
BLAST of NO03G05570 vs. NCBI_GenBank
Match: OGT74317.1 (pyridine nucleotide-disulfide oxidoreductase [Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11])

HSP 1 Score: 356.3 bits (913), Expect = 1.500e-94
Identity = 188/417 (45.08%), Postives = 258/417 (61.87%), Query Frame = 0
Query:   49 ERHRVLILGGGTAGVGTAAQL--KNAGVE-DICIVEPSDVHYYQPGWTFVGAGIFDIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTGKLFFPDQGEPSKFYFWVKQHLFPYVYWTLFPRG-KWF 462
            + H+++I+GGGTAG+  AA L  K+ G + DI I+EPSDVHYYQP +T VGAG + +E T+R    +IP  VRWI+  AA   PE+NKV L+ G+++ +DYL+V  G+  +WEKI G+ E L +   + VCSNY P++   TW  +Q L    +   A+FTQP    KC GAPQKI ++  D+LRKKG  EN ++HF     AP MF V  ++  L+      G+K + Q  LVSVD EKK ATF   GG+++G +ITM F MLH TPP S P+ +K   L NE+GFVDV + +LQHKKY N+F LG   DA + P SKT AA+   APVV  NL  ++ G +    YDGY+SCP+  +Y ++++ EFIYG K   TF       D  +     +W+K    P +YW    +G +WF
Sbjct:    5 KHHQIVIVGGGTAGITVAASLRRKHGGNDLDIAIIEPSDVHYYQPAFTLVGAGTYKLEKTRRQEQGLIPPKVRWIKDKAARFDPENNKVELSSGDSVSYDYLVVCPGLELNWEKIEGIAETLGR---NAVCSNYSPEHTEYTWQCIQELKPAAK---ALFTQPPLPFKCPGAPQKIAYLAADYLRKKGILENCEVHFL--THAPAMFAVPFFSKELDKVVARYGIKVHFQHNLVSVDGEKKSATFEIAGGDRKGVKITMDFDMLHATPPQSPPQAVKSGPLANEAGFVDVHQHSLQHKKYSNIFGLG---DACSTPNSKTAAAIRKQAPVVVRNLFVLINGGKLDEGYDGYASCPLTTAYGKVMMAEFIYGGKVTPTFP-----LDPRKERWLNWWIKTTGLPMMYWDYMLKGHEWF 405          
BLAST of NO03G05570 vs. NCBI_GenBank
Match: BAW79432.1 (FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Candidatus Nitrosoglobus terrae])

HSP 1 Score: 354.0 bits (907), Expect = 7.400e-94
Identity = 188/417 (45.08%), Postives = 258/417 (61.87%), Query Frame = 0
Query:   49 ERHRVLILGGGTAGVGTAAQL-KNAGVED--ICIVEPSDVHYYQPGWTFVGAGIFDIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTGKLFFPDQGEPSKFYFWVKQHLFPYVYWTLFPRG-KWF 462
            + ++VLI+GGGTAG+  AA L +N   +D  I IVEPS+ HYYQP +T VGAG + +E T+R+  S+IP+ V WI   A    P DN+VTLA G+ + +DYL++  G+  DWEKI GLT+ +     +GVCSNY PKYA  TW  VQ L+ G +   AIFTQP    KC GAPQKI ++T DHLRKKG   + D++F     +  MFGV  ++  L+      G+    Q  L++VD + K+ATF  +GGEK G  +T+ F MLHVTPP S PEV+K S L NE+G++DV K ++QH ++ NVF LG   DA + P SKT AA+   APVV  NL  ++ G +    YDGY+SCP+  +Y ++++ EFIYG K   TF       D  +     +W+K    P +YW    +G +WF
Sbjct:   15 KHYQVLIIGGGTAGITVAASLRRNQKGKDLSIAIVEPSEDHYYQPAFTLVGAGAYSLEKTRRSEGSLIPQQVEWIHDTAVNFNPHDNQVTLASGDPVNYDYLVICPGLALDWEKIEGLTDTI---GSNGVCSNYSPKYATYTWQCVQGLNKGDK---AIFTQPPLPFKCPGAPQKIAYLTADHLRKKGVLSDCDLYFC--TQSSVMFGVPLFSRELDKVVARYGIHAKFQHNLIAVDGQAKQATFEIVGGEKPGERVTLDFDMLHVTPPQSPPEVIKSSPLANEAGYIDVHKHSMQHIQFKNVFGLG---DACSTPNSKTAAAIRKQAPVVVKNLLHLISGSELEEGYDGYASCPLTTAYGKIIMAEFIYGGKVTPTFP-----LDPRKERWLNWWIKVTGLPIMYWDYMLKGYEWF 415          
BLAST of NO03G05570 vs. NCBI_GenBank
Match: WP_096527683.1 (NAD(P)/FAD-dependent oxidoreductase [Candidatus Nitrosoglobus terrae])

HSP 1 Score: 354.0 bits (907), Expect = 7.400e-94
Identity = 188/417 (45.08%), Postives = 258/417 (61.87%), Query Frame = 0
Query:   49 ERHRVLILGGGTAGVGTAAQL-KNAGVED--ICIVEPSDVHYYQPGWTFVGAGIFDIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTGKLFFPDQGEPSKFYFWVKQHLFPYVYWTLFPRG-KWF 462
            + ++VLI+GGGTAG+  AA L +N   +D  I IVEPS+ HYYQP +T VGAG + +E T+R+  S+IP+ V WI   A    P DN+VTLA G+ + +DYL++  G+  DWEKI GLT+ +     +GVCSNY PKYA  TW  VQ L+ G +   AIFTQP    KC GAPQKI ++T DHLRKKG   + D++F     +  MFGV  ++  L+      G+    Q  L++VD + K+ATF  +GGEK G  +T+ F MLHVTPP S PEV+K S L NE+G++DV K ++QH ++ NVF LG   DA + P SKT AA+   APVV  NL  ++ G +    YDGY+SCP+  +Y ++++ EFIYG K   TF       D  +     +W+K    P +YW    +G +WF
Sbjct:    5 KHYQVLIIGGGTAGITVAASLRRNQKGKDLSIAIVEPSEDHYYQPAFTLVGAGAYSLEKTRRSEGSLIPQQVEWIHDTAVNFNPHDNQVTLASGDPVNYDYLVICPGLALDWEKIEGLTDTI---GSNGVCSNYSPKYATYTWQCVQGLNKGDK---AIFTQPPLPFKCPGAPQKIAYLTADHLRKKGVLSDCDLYFC--TQSSVMFGVPLFSRELDKVVARYGIHAKFQHNLIAVDGQAKQATFEIVGGEKPGERVTLDFDMLHVTPPQSPPEVIKSSPLANEAGYIDVHKHSMQHIQFKNVFGLG---DACSTPNSKTAAAIRKQAPVVVKNLLHLISGSELEEGYDGYASCPLTTAYGKIIMAEFIYGGKVTPTFP-----LDPRKERWLNWWIKVTGLPIMYWDYMLKGYEWF 405          
BLAST of NO03G05570 vs. NCBI_GenBank
Match: WP_105359317.1 (NAD(P)/FAD-dependent oxidoreductase [Blastopirellula marina] >PQO25271.1 pyridine nucleotide-disulfide oxidoreductase [Blastopirellula marina])

HSP 1 Score: 353.6 bits (906), Expect = 9.700e-94
Identity = 186/410 (45.37%), Postives = 254/410 (61.95%), Query Frame = 0
Query:   51 HRVLILGGGTAGVGTAAQLKNAGVE-DICIVEPSDVHYYQPGWTFVGAGIFDIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVATGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGERGNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPRMFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGTEITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFALGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCPIPLSYDRLLLTEFIYGPKPQETFTGKLFFPDQGEPSKFYFWVKQHLFPYVYWTLFPRGK 460
            H+++I+GGGTAG+  AA+L+NA    DI +VEPSD HYYQP WT VG GIF  E + R  ASVIP GV+WI+   A   P DN++T   G+ + +DYLIVA G++ +W+K+ GL E++ K    GVCSNY      +TW  ++ L    + G A+FTQPAGAVKCGGAPQKI ++ EDH R+ G R+  ++ F      PR+F V EY  VL   A  +GV    +  L  +  E KEA +R +  ++   EI + + M+HVTPPM  P+ +  S L  E G+VDVDK TL+H ++ NVF+LG   DAS+LPTSKT AA+   APV+  NL  V+  + P A+YDGY+SCP+   YD L+L EF Y  +P ETF       DQ +     F +K+   P +YW    +G+
Sbjct:    4 HQIVIVGGGTAGITVAARLRNADPSLDIALVEPSDKHYYQPLWTLVGGGIFRPEVSGREEASVIPRGVKWIKDAVATFQPNDNQLTTRDGQTLTYDYLIVAPGIQVNWDKVKGLKESVGK---DGVCSNYSINTVASTWKFIREL----KEGTALFTQPAGAVKCGGAPQKICYLAEDHFRRSGVRDKVNVIFT--SAGPRLFAVEEYREVLEEVAARKGVDTRFRHNLTELRPESKEAIYRHMDTDE---EIVIKYDMIHVTPPMGAPDFVAHSELAGEGGWVDVDKYTLRHNRFSNVFSLG---DASSLPTSKTGAAIRKQAPVLVDNLLSVIHDRPPVAQYDGYTSCPVVTGYDSLVLAEFNYEGRPAETFPF-----DQAQERFSMFLLKKFGLPALYWHGMLKGR 393          
The following BLAST results are available for this feature:
BLAST of NO03G05570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29872.17.300e-13453.83fad-dependent pyridine nucleotide-disulfide oxidor... [more]
XP_005853537.13.900e-11154.74fad-dependent pyridine nucleotide-disulfide oxidor... [more]
WP_085215989.17.900e-9645.66NAD(P)/FAD-dependent oxidoreductase [Methylomagnum... [more]
WP_013034672.11.000e-9545.56NAD(P)/FAD-dependent oxidoreductase [Nitrosococcus... [more]
WP_013628819.12.300e-9545.61NAD(P)/FAD-dependent oxidoreductase [Rubinisphaera... [more]
WP_026609605.13.900e-9544.42NAD(P)/FAD-dependent oxidoreductase [Methylocaldum... [more]
OGT74317.11.500e-9445.08pyridine nucleotide-disulfide oxidoreductase [Gamm... [more]
BAW79432.17.400e-9445.08FAD-dependent pyridine nucleotide-disulfide oxidor... [more]
WP_096527683.17.400e-9445.08NAD(P)/FAD-dependent oxidoreductase [Candidatus Ni... [more]
WP_105359317.19.700e-9445.37NAD(P)/FAD-dependent oxidoreductase [Blastopirellu... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05570.2NO03G05570.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G05570.1NO03G05570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573394gene_1770Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05570.2NO03G05570.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G05570.1NO03G05570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05570 ID=NO03G05570|Name=NO03G05570|organism=Nannochloropsis oceanica|type=gene|length=4933bp
CAGGATCTGAACGATGCGACTCGGGCAAGCTTTTGCTGGTCGAATGTTGG
CTGGGCGTCTGCTGGGACTGCAGAAGgtgagagtttgtgggtatcgcgtg
gaagaaagcgtgtccaagatccatggaggttgcaccattttcgcgacagc
acaatctgcttatgacttcgatactactggctcagttttctatcagggct
gtcgttaaacttccacctacaacgatttccgaccatatctgatactcata
ctccaacagGTCCACGCTCACAACACCCGCGCTATTCCCCCTAGACTCGT
ACGCACGCTAGCCTCTTCACCGTCCCTTCCTACGACTGGGGAGAGGCATC
GCGTTTTGATCCTTGGCGGGGGTACTGCGGGCGTGGGGACTGCGGCGCAA
TTAAAGAATGCGGGAGTGGAAGACATATGCATCGTTGAGCCGTCCGATGT
GCATTACTACCAGgtaccaggaagcagatcagaagggaacgacctgtcct
ttattcctctttttaatgggactctctcatggaccgacctttcgacctgt
gcctttcgtttcctttccgcaataaacaccaacagCCTGGGTGGACTTTC
GTGGGGGCGGGTATTTTTGATATTGAGGCCACGAAGCGCACCACTGCCAG
TGTAATTCCTGAAGGGgtacgtggtagatctcttcctatgcaatctctat
ttcaattttccagttgcctctttatgtaccgaagcggtcttaaatttgtg
ctctttatctgtttttccatttgtccacctccgaaatcatcgttctccac
gttgggtcgttgcgccttcccgatactgtagGTCCGCTGGATCCAGGCCC
CAGCCGCCGCCATTTTGCCCGAGGATAACAAGGTCACCTTGGCCGGCGGA
GAAAATATCGGCTTCGATTATTTGATCGTAGCGACGGGGGTGCGATGCGA
TTGGGAAAAGATCCCGGGCTTGACGGAGGCACTGGAGAAGGGGCCAGAGA
GCGGCGTCTGCTCAAATTACCgtgagttttcctctttttgaagcaccatg
tttctcagctttcgccttcctttttaatttgaatgatgatttgtctgtaa
tcacctctctcttgactatgatgggactctgtctgtccctatcttttatg
gatagtgcctaaaccgtctacgcacatctatttattacgtcacagACCCC
AAGTATGCCCCGAACACGTGGGCAACTGTGCAGCGCCTCTCTTCTGGAGG
CGAACGCGGTAATGCCATTTTCACGCAGCCTGCCGGGGCTGTTAAGTGCG
GGGGGGCGCCCCAGAAGATCATGTGGATGACCGAGGACCACTTGCGGAAG
AAGGGAAAGCGGgtaagtaagtgggcgcagaggatggatcgatccttgtg
tatgtgtatatctgtccgattttagtaagcagtcctcttgtataagactg
cgcgattaaacacacgctttcgctaatacaccccaaccagGAAAACTTTG
ACATCCATTTCGCTCTTCCCTTGCCTGCGCCTCGCATGTTCGGAGTCAAT
GAATATAATCCCGTGCTCAACGCCGAGGCGGATGCACGAGGTGTGAAGCG
ATATCATCAAACGGTTTTGGTATCAGTGGATGCAGAGAAAAAGGAAGCGA
CTTTTCGGGAAATTGGCGGGGAGAAGGAAGGGACGGAGATCACGATGCCC
TTTGCCATGCTGCATGTTACCCCGCCCATGTCTGTACCTGAAGTTTTGAA
AGAGAGCACATTACTTAATGAAAGTgtaagtgtatattccgataaagggg
agaaataagaacagttggatatctatctcttaatggttctcttctgaggg
agtatcgaagcgttatgtgactttgtcgcatttgtgctattgtacaatag
tgggtctaattaacatagctcgccacgctttatactccgcactcgcatta
catatatatgatcaaaacagGGCTTCGTCGACGTCGATAAGGCAACTTTG
CAGCACAAGAAGTATCCCAATGTCTTTGCCCTGGGTGATTCCGCGGACGC
AAGTGCCCTCCCGACTTCCAAGACCATGGgtaagacgtgtgtattaaaat
ggatgtgcttttgcttgtttgcgagacatgtaagccaaatataaaaatgt
ctgcgagagcgccagaactcgggtgtgataaatcttagcgatggcctcat
tccactttttcgtctccttcctcgtaatcccatgacaaatgaacacacag
CGGCCGTCGCCGCCATGGCGCCAGTGGTCACGCATAATCTTCAACGTGTG
ATGCAAGGCAAGCAACCCTCGGCGGAGTATGATGGCTACTCGAGCTGTCC
TATTCCACTGAGTTACGATAGACTGCTGCTTACgtaagtattgagtaagg
gatatgcactcgtacagtctaactgactgattttgataaagcgctcactt
cctccctctatcctttcatccacctgtccgcacaacatggcagCGAATTT
ATCTACGGACCCAAACCCCAAGAGACTTTTACGGGCAAGCTTTTCTTCCC
CGATCAGGGGGAGCCCAGCAAGTTCTATTTCTGGGTCAAGCAACACCTCT
TCCCGTATGTGTACTGGACTCTGTTTCCTCGAGGGAAGTGGTTTGGGAGG
CAGTTACTTACTCCCTTTGATTTCTCCGAGGCCGATGCGAAGAAAGCATA
ATTGACCGTATATTTACATCTTGTGCGTGATTTCGACTTTTTGTCGATTT
CTACATTTAGTTGGCTATGTTATGAATATCGTTTAGAGACTGTGTAAGCA
TGAAATGAGCAAAGTATTGCATCAAGGTCCACGTGAGTTTTTCAATTTCT
TCTCTTACCTCTTAAATGGTAAGGGTGGTGATCCTGGCGGTGATGGACAG
CTTAATTTCTTCTTACGACTCTGTGGATCGACGGGATCTGCACGCAGACT
ATGACTCGGAGTATACGTTCAATCTACGCCTCCGAAAAAATCAGCTGGTG
ATAATTTAAGGGGGGGAAAAGAGATGGGTGGAGGGCTTCCTTTCAATCTA
ACAACTGTGTCTGGTTTCTGACATGGATCTAGATGTGCTGGCCCCAGATG
TGCTGTGTCATAGTCTTTGTCCAGTCGAGCGGCAAAAGGGCTGCACTATG
TGGTAGAAAATAGTGAAGTAAGAAAGCAAAAAAGTAGGAGAAAGAAATAA
CTAGGAAACATGGAGACGGTGAGGCAATTTGAAAGAGATTCTACGTGTAT
GGATTCTCGATTTTTTGGGTCTCAAAGATTCCTCTTTTGAGACCAATCTG
ACATACCCTCACGCCCACTTTTTCTGTATCTGTTATCACACACAGGCATT
AAAATCAAGACTCTTCGAATCTTCGTCTATGCTGCTTACGTTTTTCCTCT
CCCTCTTCATCATTCTCTTCTCAAGAAGCTCTTACACTATATCTCTCGCA
ACCACTTCACTCATACCCGCTTGCTTGTATCTCTCTCCCTCTCTCCCCGC
CTTCACGTCTCTATTCTTATCATTCCTTGATATTCGTAATGGCCCCCTCT
CCATCCATAATTGTTTTCGTGGGAGTCATCGGCATCTCAGGGCAGTTGGC
GAGGCATGTGGAATGTGCCCATCCCCCGCGGCTGCGGTCCTCTTTGGGCT
TAGCAATATGCTCACCGGGCGCGACCTCATTCCCGCAAAGAGGGCAATGG
CCAGACTTAAAATGTGCCTTCACTATTCGATATCCCTGTCGCTTCATCTC
ATCGTCTGCCGCCTCCTCTTCATTTCCGCTCGTTCCCTTCTCTAATTCTG
AAAGACGAGGTAAGTCCCTGCGGCGCTTGGCCACCGCCAAAGCATGCACC
TCAATCAGCCCTATCGCATCCTCGTCCTCCTGCCACTCTTGCTTTTGGTA
TTCCCCTTTTTCTTCCTGCTCTTGCTGCATCAGCCCAGAGGATATAGCCC
TGATGTGCTCCAGGTGCATCTCGTAAGGAGAGCCATAAGAACTATACATG
ATCTTCCGCTCCTCCGCCGTCTGCAGAAGAGCTTGCTTTGCGTCTTCCAG
CAAGTTATTACACATAACATGACTACGCTTCTGGCCAGGCAAATGTGACG
AGGGAGGTGAGAGCCAGAGGTGGACCTTGAAGTTGTAGAGCTCACGCGGC
TTTTTCTCGTCCATAGTGGCCTGCAACCAAAGGGGGGGAAATGAGAACCC
AGAGAAGTTGGGAGACGGAAGGAGGTAGGGAGACAAAAGCAAGAGAGTGG
TGAAAGGTGGAACGGCTTTGAGCACGAGAAGGCTTGTCAATAGTTCTACT
CTCAAATGTATACACAGACACATAATTTCGTCGCCCAAGCACATAGCTCT
GTTCACCACAACCTTTTCTTGTCGTGATCCCCACCCCTCGAAAAATAAGT
AAGAAGGACATGTAAGGGAGACAATGAAATATCCGACAGAAAAAATTCTG
AATTAGACGGATCGGTTTACTCACAGTTTAGGGAGGATTTTGGCCAGTTT
GTCATTCTCTTTGTCGTCCTTGCTTGAAGACACTCATGACCAAAAACGCC
GCCCTTCCTACCCAGCAAAACGAACCTCGACGTCCTTGACCACATAGCCG
TCACTCAGCACCTCGCCAGCTTTGAGACCCAGCGTCTTCTTAAGCTCGTA
AATGGACGGCATTGTCTTGACTGTAGGTATGTTTCCTATGTGTTGAGTGG
GGAGGGAATGTTGCAGTTAAGAATATCAGTGTTCTGTTCGGGGGAGCAGA
TGGGGGGGGGACAAAAAGGGACATATACATCTGCACATGCACCTGTTCTG
TACCAGCACGCATTTTATATTTTCTTGTGACCATTTCCAATAATGTGACT
CTAGGCCAAGGGAAATGCAGCGAAAGCAAACCGAGCACTCTCCTCCCCCC
CGTGTAGTAAGGCTTCCTTCCCTCCACAACGCC
back to top

protein sequence of NO03G05570.2

>NO03G05570.2-protein ID=NO03G05570.2-protein|Name=NO03G05570.2|organism=Nannochloropsis oceanica|type=polypeptide|length=341bp
MRLGQAFAGRMLAGRLLGLQKVHAHNTRAIPPRLVRTLASSPSLPTTGER
HRVLILGGGTAGVGTAAQLKNAGVEDICIVEPSDVHYYQPGWTFVGAGIF
DIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVA
TGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGER
GNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPR
MFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGT
EITMPFAMLHVTPPMSVPEVLKESTLLNESVSVYSDKGEK*
back to top

protein sequence of NO03G05570.1

>NO03G05570.1-protein ID=NO03G05570.1-protein|Name=NO03G05570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=480bp
MRLGQAFAGRMLAGRLLGLQKVHAHNTRAIPPRLVRTLASSPSLPTTGER
HRVLILGGGTAGVGTAAQLKNAGVEDICIVEPSDVHYYQPGWTFVGAGIF
DIEATKRTTASVIPEGVRWIQAPAAAILPEDNKVTLAGGENIGFDYLIVA
TGVRCDWEKIPGLTEALEKGPESGVCSNYHPKYAPNTWATVQRLSSGGER
GNAIFTQPAGAVKCGGAPQKIMWMTEDHLRKKGKRENFDIHFALPLPAPR
MFGVNEYNPVLNAEADARGVKRYHQTVLVSVDAEKKEATFREIGGEKEGT
EITMPFAMLHVTPPMSVPEVLKESTLLNESGFVDVDKATLQHKKYPNVFA
LGDSADASALPTSKTMAAVAAMAPVVTHNLQRVMQGKQPSAEYDGYSSCP
IPLSYDRLLLTEFIYGPKPQETFTGKLFFPDQGEPSKFYFWVKQHLFPYV
YWTLFPRGKWFGRQLLTPFDFSEADAKKA*
back to top
Synonyms
Publications