NO03G05370, NO03G05370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05370 vs. NCBI_GenBank
Match: XP_002181897.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46437.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 166.4 bits (420), Expect = 7.800e-38 Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLREGR---ENGRKEGRKLMVGRRHFEAAFGKVSPSVSARDQKRYLAMR 140 MDGLE RR VFVIAATNRPELIDPAM+RPGRLDKLL+VPLPGPEDR IL+A+C G+ + +VD+D +GR R +GYSGAD AAL+ EAG+ VL+E G+ + +L + +HF+AAF V PSVS DQ RY +R Sbjct: 410 MDGLESRRSVFVIAATNRPELIDPAMMRPGRLDKLLFVPLPGPEDRVLILKALCTGINL-AADVDMDHIGRSPRTDGYSGADCAALLREAGLAVLKEDATAFAAGKPDSVELKITSKHFDAAFHSVMPSVSKNDQARYERIR 550
BLAST of NO03G05370 vs. NCBI_GenBank
Match: BAT25230.1 (host cell division cycle protein [Nitzschia sp. IriIs04]) HSP 1 Score: 165.6 bits (418), Expect = 1.300e-37 Identity = 94/171 (54.97%), Postives = 110/171 (64.33%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLRE---------GRENGRKEGRKLMVGRRHFEAAFGKVSPSVSARDQKRYLAMRHNLCRARGAAGGHANVAGEEEKE 163 MDGLE RR VFVIAATNRPELIDPAM+RPGRLDKLLYVPLP P DR SIL+A+ V + +VDLD +GR RA+GYSGAD AAL+ EAG+ VL+E E E R + + RHF+ AF V PSVS +DQ RY MR + AR A E+ KE Sbjct: 246 MDGLESRRSVFVIAATNRPELIDPAMMRPGRLDKLLYVPLPTPNDRVSILKAISGKVNLG-PDVDLDTIGRSARADGYSGADCAALLREAGLAVLKEEMSASANAMDTEEEEGEERNICITARHFDYAFDHVVPSVSRKDQARYNRMRDRMAHARSRGAVVEETALEDVKE 415
BLAST of NO03G05370 vs. NCBI_GenBank
Match: GAX13461.1 (ribosome biogenesis ATPase [Fistulifera solaris]) HSP 1 Score: 165.2 bits (417), Expect = 1.700e-37 Identity = 85/148 (57.43%), Postives = 106/148 (71.62%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLRE--GRENGRKEGRKLMVGRRHFEAAFGKVSPSVSARDQKRYLAMRHNLCRAR 147 MDGL+GRR VF+IAATNRPELIDPAMLRPGRLDKLLYVPLP PEDR SIL+A+ +A+ +VD + +G RA GYSGAD AAL+ EAG+ VL+E + +E R L + RHF+ AF V PSV+ R++ RY +R + AR Sbjct: 648 MDGLDGRRSVFIIAATNRPELIDPAMLRPGRLDKLLYVPLPTPEDRVSILKALSSNIAL-ADDVDFEVIGMSTRANGYSGADCAALLREAGLAVLKEDTALNDSLQENRSLQISARHFDIAFSSVMPSVTRREEARYQRIRDRMSNAR 794
BLAST of NO03G05370 vs. NCBI_GenBank
Match: EWM30003.1 (aaa atpase [Nannochloropsis gaditana]) HSP 1 Score: 161.8 bits (408), Expect = 1.900e-36 Identity = 81/99 (81.82%), Postives = 88/99 (88.89%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLREGR 100 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRA+IL+AV R +A+D EVDL+ +GRD RAEGYSGADMAALV EAG+ RE R Sbjct: 558 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRAAILKAVSRDMAVDAAEVDLEALGRDHRAEGYSGADMAALVREAGVN--RESR 654
BLAST of NO03G05370 vs. NCBI_GenBank
Match: GAX29521.1 (ribosome biogenesis ATPase [Fistulifera solaris]) HSP 1 Score: 159.5 bits (402), Expect = 9.600e-36 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLRE--GRENGRKEGRKLMVGRRHFEAAFGKVSPSVSARDQKRYLAMRHNLCRAR 147 MDGL+ RR VF+IAATNRPELIDPAMLRPGRLDKLLYVPLP PEDR SIL+A+ +A+ +VD + +G RA GYSGAD AAL+ EAG+ VL+E ++ ++ R L + RHF+ AF V PSV+ +++ RY +R + AR Sbjct: 620 MDGLDARRSVFIIAATNRPELIDPAMLRPGRLDKLLYVPLPTPEDRVSILKALSSNIAL-ADDVDFEVIGMSTRANGYSGADCAALLREAGLAVLKEDTALDDSLQDERSLQICARHFDIAFNSVMPSVTKKEEARYQRIRDRMSNAR 766
BLAST of NO03G05370 vs. NCBI_GenBank
Match: OEU22417.1 (AAA-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 151.8 bits (382), Expect = 2.000e-33 Identity = 84/159 (52.83%), Postives = 101/159 (63.52%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLREGRENGRKEGR--------------------KLMVGRRHFEAAFGKVSPSVSARDQKRYLAMR 140 MDGLE RR VFVI ATNRPELIDPAM+RPGRLDKLLYVPLP P DR SIL+A+ +++ EVDL ++G +AEGYSGAD AAL+ EAG+ V++E +N + R L + RHF AF V PSVS +D RYL MR Sbjct: 413 MDGLESRRSVFVIGATNRPELIDPAMMRPGRLDKLLYVPLPEPNDRVSILKALSCSMSLS-PEVDLHKIGTSLQAEGYSGADCAALLREAGLAVMKEFHDNSKSTARPNKDDLXXXXXXXXXXASSFPLCISPRHFNYAFDHVVPSVSRKDHARYLRMR 570
BLAST of NO03G05370 vs. NCBI_GenBank
Match: PNW78410.1 (hypothetical protein CHLRE_09g398550v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 151.4 bits (381), Expect = 2.600e-33 Identity = 86/171 (50.29%), Postives = 110/171 (64.33%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLREGRENGRKEGRKLMVGRRHFEAAFGKVSPSVSARDQKRYLAMRHNLCRAR---------------GAAGGHANVA 157 MDG++ R+ +F++AATNRP++IDPA+LRPGRL+K+LYVPLP P+DRA+IL+A R ++ +VDL V DGR EGYSGAD AALV EA + L+E G G VG RHFEAA G+V PSVS +D+ Y A+R L +R GAAGG A Sbjct: 924 MDGVDSRQGLFIVAATNRPDMIDPALLRPGRLEKVLYVPLPPPQDRAAILKAQVRKTPLE-PDVDLAAVAIDGRCEGYSGADCAALVREAAVLALKEAMRAGPDCGSP-RVGARHFEAALGRVQPSVSRKDRASYEALRVRLRGSRSVIQPAAAVVEMPPSGAAGGTGEAA 1092
BLAST of NO03G05370 vs. NCBI_GenBank
Match: XP_001694521.1 (predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 151.0 bits (380), Expect = 3.400e-33 Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLREGRENGRKEGRKLMVGRRHFEAAFGKVSPSVSARDQKRYLAMRHNL 143 MDG++ R+ +F++AATNRP++IDPA+LRPGRL+K+LYVPLP P+DRA+IL+A R ++ +VDL V DGR EGYSGAD AALV EA + L+E G G VG RHFEAA G+V PSVS +D+ Y A+R L Sbjct: 441 MDGVDSRQGLFIVAATNRPDMIDPALLRPGRLEKVLYVPLPPPQDRAAILKAQVRKTPLE-PDVDLAAVAIDGRCEGYSGADCAALVREAAVLALKEAMRAGPDCGSP-RVGARHFEAALGRVQPSVSRKDRASYEALRVRL 580
BLAST of NO03G05370 vs. NCBI_GenBank
Match: GAX99541.1 (Hypothetical protein PINS_007377 [Pythium insidiosum]) HSP 1 Score: 150.6 bits (379), Expect = 4.400e-33 Identity = 82/146 (56.16%), Postives = 100/146 (68.49%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLREGRENGRKEGRKLMVGRRHFEAAFGKVSPSVSARDQKRYLAMRHNLCRAR 147 MDGL+ R++VFVIAATNRP++IDPAMLRPGRLDKLLYVPLP PEDR IL+ V + + +VDL + D R EG+SGAD++AL EAGI LRE + L + RHFE AF V PSVS DQ+ + M+ NL RAR Sbjct: 626 MDGLDARKNVFVIAATNRPDIIDPAMLRPGRLDKLLYVPLPTPEDRVQILRTVTKASRL-HADVDLAAIASDPRCEGFSGADLSALSREAGIAALRE-IDLATASADALAIQHRHFEQAFETVFPSVSRADQRLFDKMKKNLRRAR 769
BLAST of NO03G05370 vs. NCBI_GenBank
Match: CBJ26144.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 149.4 bits (376), Expect = 9.900e-33 Identity = 84/170 (49.41%), Postives = 114/170 (67.06%), Query Frame = 0 Query: 1 MDGLEGRRHVFVIAATNRPELIDPAMLRPGRLDKLLYVPLPGPEDRASILQAVCRGVAIDRKEVDLDEVGRDGRAEGYSGADMAALVHEAGIEVLRE--------GRENGRKEGRKLMVGRRHFEAAFGKVSPSVSARDQKRYLAMRHNLCRARGAAGGHANVAGEEEKE 163 MDGLE R++VFV+AATNRPELID AMLRPGRLD+LLYVPLP DR SIL+A+ V++ +VDL VG + +AEG+SGAD+AAL+ EAG++VLR+ G+ ++G +V +F+ AF + PSVSA D+ Y++M+ LC+AR AG + E Sbjct: 789 MDGLEARKNVFVVAATNRPELIDQAMLRPGRLDRLLYVPLPSASDRVSILKALSATVSLG-PDVDLHAVGHNPKAEGFSGADLAALLREAGLDVLRQLKSRELIVGKGAYTEKGAGTVVMATNFDNAFLRTQPSVSATDRAFYVSMKDRLCKARAHPSEALPPAGGGDNE 957 The following BLAST results are available for this feature:
BLAST of NO03G05370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05370 ID=NO03G05370|Name=NO03G05370|organism=Nannochloropsis oceanica|type=gene|length=516bpback to top protein sequence of NO03G05370.1 >NO03G05370.1-protein ID=NO03G05370.1-protein|Name=NO03G05370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=172bpback to top Synonyms
Publications
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